RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
LINC01004-202ENST00000450686 COL1A1P02452 1464 aaPredicted RBP12.87□□□□□ -0.35
LINC01004-202ENST00000450686 FKTNO75072 461 aa12.87□□□□□ -0.35
LINC01004-202ENST00000450686 NBPF7P0C2Y1 421 aaPredicted RBP12.87□□□□□ -0.35
LINC01004-202ENST00000450686 CAP1Q01518 475 aa12.87□□□□□ -0.35
LINC01004-202ENST00000450686 RASA3Q14644 834 aa12.87□□□□□ -0.35
LINC01004-202ENST00000450686 CCDC57Q2TAC2 916 aa12.87□□□□□ -0.35
LINC01004-202ENST00000450686 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
LINC01004-202ENST00000450686 ANP32CO43423 234 aa12.86□□□□□ -0.35
LINC01004-202ENST00000450686 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
LINC01004-202ENST00000450686 CHAF1AQ13111 956 aaPredicted RBP12.86□□□□□ -0.35
LINC01004-202ENST00000450686 MFSD14BQ5SR56 506 aa12.86□□□□□ -0.35
LINC01004-202ENST00000450686 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
LINC01004-202ENST00000450686 MTMR14Q8NCE2 650 aa12.86□□□□□ -0.35
LINC01004-202ENST00000450686 KLHDC4Q8TBB5 520 aa12.86□□□□□ -0.35
LINC01004-202ENST00000450686 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
LINC01004-202ENST00000450686 ELP3Q9H9T3 547 aa12.86□□□□□ -0.35
LINC01004-202ENST00000450686 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
LINC01004-202ENST00000450686 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
LINC01004-202ENST00000450686 LAMB1P07942 1786 aa12.85□□□□□ -0.35
LINC01004-202ENST00000450686 TCP10L2B9ZVM9 353 aa12.85□□□□□ -0.35
LINC01004-202ENST00000450686 CACNB3P54284 484 aa12.85□□□□□ -0.35
LINC01004-202ENST00000450686 LRRC24Q50LG9 513 aa12.85□□□□□ -0.35
LINC01004-202ENST00000450686 FAM84BQ96KN1 310 aaPredicted RBP12.85□□□□□ -0.35
LINC01004-202ENST00000450686 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
LINC01004-202ENST00000450686 BICC1Q9H694 974 aaKnown RBP12.85□□□□□ -0.35
LINC01004-202ENST00000450686 ZNF70Q9UC06 446 aaPredicted RBP12.85□□□□□ -0.35
LINC01004-202ENST00000450686 TRIM17Q9Y577 477 aa12.85□□□□□ -0.35
LINC01004-202ENST00000450686 KIAA0100Q14667 2235 aaKnown RBP12.85□□□□□ -0.35
LINC01004-202ENST00000450686 MYO1BO43795 1136 aa12.84□□□□□ -0.35
LINC01004-202ENST00000450686 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
LINC01004-202ENST00000450686 HIBADHP31937 336 aaKnown RBP12.84□□□□□ -0.35
LINC01004-202ENST00000450686 GSE1Q14687 1217 aa12.84□□□□□ -0.35
LINC01004-202ENST00000450686 FBXO46Q6PJ61 603 aaPredicted RBP12.84□□□□□ -0.35
LINC01004-202ENST00000450686 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
LINC01004-202ENST00000450686 TDRD7Q8NHU6 1098 aaKnown RBP12.84□□□□□ -0.35
LINC01004-202ENST00000450686 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
LINC01004-202ENST00000450686 PTPN18Q99952 460 aa12.84□□□□□ -0.35
LINC01004-202ENST00000450686 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
LINC01004-202ENST00000450686 FAM205AQ6ZU69 1335 aa12.84□□□□□ -0.35
LINC01004-202ENST00000450686 MANSC4A6NHS7 340 aaPredicted RBP12.83□□□□□ -0.36
LINC01004-202ENST00000450686 ALDH1L1O75891 902 aa12.83□□□□□ -0.36
LINC01004-202ENST00000450686 CRHR2Q13324 411 aa12.83□□□□□ -0.36
LINC01004-202ENST00000450686 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
LINC01004-202ENST00000450686 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
LINC01004-202ENST00000450686 PHF12Q96QT6 1004 aa12.83□□□□□ -0.36
LINC01004-202ENST00000450686 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 ECM2O94769 699 aaPredicted RBP12.82□□□□□ -0.36
LINC01004-202ENST00000450686 CRKP46108 304 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 IREB2P48200 963 aaKnown RBP12.82□□□□□ -0.36
LINC01004-202ENST00000450686 MMP14P50281 582 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 FKBP1AP62942 108 aaKnown RBP12.82□□□□□ -0.36
LINC01004-202ENST00000450686 PKN2Q16513 984 aaKnown RBP12.82□□□□□ -0.36
LINC01004-202ENST00000450686 SUPT20HL1Q3ZLR7 823 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 DZIP1LQ8IYY4 767 aaKnown RBP12.82□□□□□ -0.36
LINC01004-202ENST00000450686 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 PPP2R3BQ9Y5P8 575 aa12.82□□□□□ -0.36
LINC01004-202ENST00000450686 ZBTB48P10074 688 aaPredicted RBP12.81□□□□□ -0.36
LINC01004-202ENST00000450686 UBE4AQ14139 1066 aa12.81□□□□□ -0.36
LINC01004-202ENST00000450686 METTL24Q5JXM2 366 aa12.81□□□□□ -0.36
LINC01004-202ENST00000450686 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.81□□□□□ -0.36
LINC01004-202ENST00000450686 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
LINC01004-202ENST00000450686 CFHR5Q9BXR6 569 aa12.81□□□□□ -0.36
LINC01004-202ENST00000450686 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
LINC01004-202ENST00000450686 ZNF316A6NFI3 1004 aaPredicted RBP12.8□□□□□ -0.36
LINC01004-202ENST00000450686 BCAMP50895 628 aa12.8□□□□□ -0.36
LINC01004-202ENST00000450686 VGLL4Q14135 290 aa12.8□□□□□ -0.36
LINC01004-202ENST00000450686 NOM1Q5C9Z4 860 aaKnown RBP12.8□□□□□ -0.36
LINC01004-202ENST00000450686 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
LINC01004-202ENST00000450686 ANKRD13AQ8IZ07 590 aa12.8□□□□□ -0.36
LINC01004-202ENST00000450686 BRI3BPQ8WY22 251 aa12.8□□□□□ -0.36
LINC01004-202ENST00000450686 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
LINC01004-202ENST00000450686 ALDH1A1P00352 501 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
LINC01004-202ENST00000450686 CLCN6P51797 869 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 RABL6Q3YEC7 729 aaPredicted RBP12.79□□□□□ -0.36
LINC01004-202ENST00000450686 PRPF38BQ5VTL8 546 aaKnown RBP12.79□□□□□ -0.36
LINC01004-202ENST00000450686 VPS37DQ86XT2 251 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 VGLL2Q8N8G2 317 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 SSH1Q8WYL5 1049 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 UTYO14607 1347 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 CEP290O15078 2479 aa12.79□□□□□ -0.36
LINC01004-202ENST00000450686 CCL15-CCL14A0A0B4J2E2 113 aa12.78□□□□□ -0.36
LINC01004-202ENST00000450686 FRAT2O75474 233 aaPredicted RBP12.78□□□□□ -0.36
LINC01004-202ENST00000450686 CCL15Q16663 113 aa12.78□□□□□ -0.36
LINC01004-202ENST00000450686 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
LINC01004-202ENST00000450686 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
LINC01004-202ENST00000450686 INHBEP58166 350 aa12.77□□□□□ -0.37
LINC01004-202ENST00000450686 TNFAIP1Q13829 316 aa12.77□□□□□ -0.37
LINC01004-202ENST00000450686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.77□□□□□ -0.37
LINC01004-202ENST00000450686 ZKSCAN4Q969J2 545 aaPredicted RBP12.77□□□□□ -0.37
LINC01004-202ENST00000450686 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
LINC01004-202ENST00000450686 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
LINC01004-202ENST00000450686 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
LINC01004-202ENST00000450686 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms