RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 COL1A1P02452 1464 aaPredicted RBP21.94■■□□□ 1.1
FAM3A-216ENST00000449971 MYCP01106 439 aaPredicted RBP21.93■■□□□ 1.1
FAM3A-216ENST00000449971 IREB2P48200 963 aaKnown RBP21.93■■□□□ 1.1
FAM3A-216ENST00000449971 MAP3K11Q16584 847 aa21.93■■□□□ 1.1
FAM3A-216ENST00000449971 C15orf52Q6ZUT6 534 aaKnown RBP21.93■■□□□ 1.1
FAM3A-216ENST00000449971 PRMT6Q96LA8 375 aaPredicted RBP21.93■■□□□ 1.1
FAM3A-216ENST00000449971 RIPOR2Q9Y4F9 1068 aa21.93■■□□□ 1.1
FAM3A-216ENST00000449971 ZNF804AQ7Z570 1209 aa21.92■■□□□ 1.1
FAM3A-216ENST00000449971 KLHDC4Q8TBB5 520 aa21.92■■□□□ 1.1
FAM3A-216ENST00000449971 ELP3Q9H9T3 547 aa21.92■■□□□ 1.1
FAM3A-216ENST00000449971 PPP2R3BQ9Y5P8 575 aa21.92■■□□□ 1.1
FAM3A-216ENST00000449971 MROH5Q6ZUA9 1318 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 IRS2Q9Y4H2 1338 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 SPDYE2BA6NHP3 402 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 SPDYE6P0CI01 402 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 CAP1Q01518 475 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 SP3Q02447 781 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 RASA3Q14644 834 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 LRRC24Q50LG9 513 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 HDAC5Q9UQL6 1122 aa21.91■■□□□ 1.1
FAM3A-216ENST00000449971 USP2O75604 605 aaPredicted RBP21.9■■□□□ 1.1
FAM3A-216ENST00000449971 UBE4AQ14139 1066 aa21.9■■□□□ 1.1
FAM3A-216ENST00000449971 METTL24Q5JXM2 366 aa21.9■■□□□ 1.1
FAM3A-216ENST00000449971 OPTNQ96CV9 577 aa21.9■■□□□ 1.1
FAM3A-216ENST00000449971 PTPN18Q99952 460 aa21.9■■□□□ 1.1
FAM3A-216ENST00000449971 TMEM106CQ9BVX2 250 aa21.9■■□□□ 1.1
FAM3A-216ENST00000449971 ANKRD13AQ8IZ07 590 aa21.89■■□□□ 1.09
FAM3A-216ENST00000449971 MTMR14Q8NCE2 650 aa21.89■■□□□ 1.09
FAM3A-216ENST00000449971 ZBED9Q6R2W3 1325 aa21.88■■□□□ 1.09
FAM3A-216ENST00000449971 ATF7IPQ6VMQ6 1270 aa21.88■■□□□ 1.09
FAM3A-216ENST00000449971 CNKSR2Q8WXI2 1034 aa21.88■■□□□ 1.09
FAM3A-216ENST00000449971 ARMC5Q96C12 935 aa21.88■■□□□ 1.09
FAM3A-216ENST00000449971 MEIS3Q99687 375 aa21.88■■□□□ 1.09
FAM3A-216ENST00000449971 LRRFIP2Q9Y608 721 aaKnown RBP21.88■■□□□ 1.09
FAM3A-216ENST00000449971 TRIM27P14373 513 aa21.87■■□□□ 1.09
FAM3A-216ENST00000449971 IL1R1P14778 569 aa21.87■■□□□ 1.09
FAM3A-216ENST00000449971 SLC4A8Q2Y0W8 1093 aa21.87■■□□□ 1.09
FAM3A-216ENST00000449971 CLUAP1Q96AJ1 413 aa21.87■■□□□ 1.09
FAM3A-216ENST00000449971 TNNQ9UQP3 1299 aa21.87■■□□□ 1.09
FAM3A-216ENST00000449971 ECM2O94769 699 aaPredicted RBP21.86■■□□□ 1.09
FAM3A-216ENST00000449971 HIBADHP31937 336 aaKnown RBP21.86■■□□□ 1.09
FAM3A-216ENST00000449971 GYG1P46976 350 aa21.86■■□□□ 1.09
FAM3A-216ENST00000449971 RFX5P48382 616 aaPredicted RBP21.86■■□□□ 1.09
FAM3A-216ENST00000449971 SLC9C1Q4G0N8 1177 aa21.86■■□□□ 1.09
FAM3A-216ENST00000449971 PTCH2Q9Y6C5 1203 aa21.86■■□□□ 1.09
FAM3A-216ENST00000449971 EYA2O00167 538 aa21.85■■□□□ 1.09
FAM3A-216ENST00000449971 PDE8BO95263 885 aa21.85■■□□□ 1.09
FAM3A-216ENST00000449971 GNAI3P08754 354 aa21.85■■□□□ 1.09
FAM3A-216ENST00000449971 FXR1P51114 621 aaKnown RBP eCLIP21.85■■□□□ 1.09
FAM3A-216ENST00000449971 TAF1CQ15572 869 aaPredicted RBP21.85■■□□□ 1.09
FAM3A-216ENST00000449971 ZKSCAN2Q63HK3 967 aa21.85■■□□□ 1.09
FAM3A-216ENST00000449971 CDAN1Q8IWY9 1227 aa21.85■■□□□ 1.09
FAM3A-216ENST00000449971 FAM84BQ96KN1 310 aaPredicted RBP21.85■■□□□ 1.09
FAM3A-216ENST00000449971 TDRD3Q9H7E2 651 aaKnown RBP21.85■■□□□ 1.09
FAM3A-216ENST00000449971 TCP10L2B9ZVM9 353 aa21.84■■□□□ 1.09
FAM3A-216ENST00000449971 ZNF333Q96JL9 665 aa21.84■■□□□ 1.09
FAM3A-216ENST00000449971 ZNF70Q9UC06 446 aaPredicted RBP21.84■■□□□ 1.09
FAM3A-216ENST00000449971 COLQQ9Y215 455 aaPredicted RBP21.84■■□□□ 1.09
FAM3A-216ENST00000449971 ECM29Q5VYK3 1845 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 CCL15-CCL14A0A0B4J2E2 113 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 UNCXA6NJT0 531 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 CCL15Q16663 113 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 VPS37DQ86XT2 251 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 VGLL2Q8N8G2 317 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 BRI3BPQ8WY22 251 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 SIL1Q9H173 461 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 ZFYVE28Q9HCC9 887 aa21.83■■□□□ 1.09
FAM3A-216ENST00000449971 TTF2Q9UNY4 1162 aaKnown RBP21.83■■□□□ 1.09
FAM3A-216ENST00000449971 TESPA1A2RU30 521 aaPredicted RBP21.82■■□□□ 1.08
FAM3A-216ENST00000449971 TNFAIP1Q13829 316 aa21.82■■□□□ 1.08
FAM3A-216ENST00000449971 CAVIN4Q5BKX8 364 aa21.82■■□□□ 1.08
FAM3A-216ENST00000449971 MFSD14BQ5SR56 506 aa21.82■■□□□ 1.08
FAM3A-216ENST00000449971 NBPF11Q86T75 865 aa21.82■■□□□ 1.08
FAM3A-216ENST00000449971 TDRD7Q8NHU6 1098 aaKnown RBP21.82■■□□□ 1.08
FAM3A-216ENST00000449971 OTUD5Q96G74 571 aa21.82■■□□□ 1.08
FAM3A-216ENST00000449971 FKBP1AP62942 108 aaKnown RBP21.81■■□□□ 1.08
FAM3A-216ENST00000449971 ARHGEF6Q15052 776 aa21.81■■□□□ 1.08
FAM3A-216ENST00000449971 SPDYE2Q495Y8 402 aa21.81■■□□□ 1.08
FAM3A-216ENST00000449971 FBXO33Q7Z6M2 555 aa21.81■■□□□ 1.08
FAM3A-216ENST00000449971 MS4A4AQ96JQ5 239 aa21.81■■□□□ 1.08
FAM3A-216ENST00000449971 TMEM39BQ9GZU3 492 aa21.81■■□□□ 1.08
FAM3A-216ENST00000449971 IFIT1P09914 478 aaKnown RBP21.8■■□□□ 1.08
FAM3A-216ENST00000449971 VGLL4Q14135 290 aa21.8■■□□□ 1.08
FAM3A-216ENST00000449971 PUM3Q15397 648 aaKnown RBP21.8■■□□□ 1.08
FAM3A-216ENST00000449971 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.8■■□□□ 1.08
FAM3A-216ENST00000449971 ATG9AQ7Z3C6 839 aa21.8■■□□□ 1.08
FAM3A-216ENST00000449971 TMEM57Q8N5G2 664 aa21.8■■□□□ 1.08
FAM3A-216ENST00000449971 SH3TC2Q8TF17 1288 aa21.8■■□□□ 1.08
FAM3A-216ENST00000449971 IQSEC3Q9UPP2 1182 aaPredicted RBP21.8■■□□□ 1.08
FAM3A-216ENST00000449971 CSADQ9Y600 493 aa21.8■■□□□ 1.08
FAM3A-216ENST00000449971 OTOFQ9HC10 1997 aa21.79■■□□□ 1.08
FAM3A-216ENST00000449971 RBBP6Q7Z6E9 1792 aaKnown RBP21.79■■□□□ 1.08
FAM3A-216ENST00000449971 FRAT2O75474 233 aaPredicted RBP21.79■■□□□ 1.08
FAM3A-216ENST00000449971 GTF2A2P52657 109 aa21.79■■□□□ 1.08
FAM3A-216ENST00000449971 MAP3K9P80192 1104 aa21.79■■□□□ 1.08
FAM3A-216ENST00000449971 FAM43AQ8N2R8 423 aa21.79■■□□□ 1.08
FAM3A-216ENST00000449971 CEP126Q9P2H0 1117 aa21.79■■□□□ 1.08
FAM3A-216ENST00000449971 FBXO3Q9UK99 471 aa21.79■■□□□ 1.08
FAM3A-216ENST00000449971 PA2G4Q9UQ80 394 aaKnown RBP21.79■■□□□ 1.08
FAM3A-216ENST00000449971 FAM205AQ6ZU69 1335 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms