RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 F13A1P00488 732 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 RASIP1Q5U651 963 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 IL17REQ8NFR9 667 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 CTNNBL1Q8WYA6 563 aaPredicted RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 UBASH3AP57075 661 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 FKBP4Q02790 459 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMC6-207ENST00000448223 PTH1RQ03431 593 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 RNF10Q8N5U6 811 aaKnown RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 PPP1R14CQ8TAE6 165 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 SH2B1Q9NRF2 756 aaPredicted RBP10.44□□□□□ -0.74
SMC6-207ENST00000448223 SNRKQ9NRH2 765 aa10.44□□□□□ -0.74
SMC6-207ENST00000448223 BIN1O00499 593 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 CDKL5O76039 1030 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 KIAA0753Q2KHM9 967 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 ADCK5Q3MIX3 580 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 ANO6Q4KMQ2 910 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 PLEKHO1Q53GL0 409 aaPredicted RBP10.43□□□□□ -0.74
SMC6-207ENST00000448223 FSIP1Q8NA03 581 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 RIPOR2Q9Y4F9 1068 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 CEP104O60308 925 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 TACO1Q9BSH4 297 aaKnown RBP10.43□□□□□ -0.74
SMC6-207ENST00000448223 IL25Q9H293 177 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 ZHX3Q9H4I2 956 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMC6-207ENST00000448223 FAF1Q9UNN5 650 aaPredicted RBP10.43□□□□□ -0.74
SMC6-207ENST00000448223 PIK3R4Q99570 1358 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 CIB2O75838 187 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 COG7P83436 770 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 USP32Q8NFA0 1604 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 IBTKQ9P2D0 1353 aaPredicted RBP10.43□□□□□ -0.74
SMC6-207ENST00000448223 NEXMIFQ5QGS0 1516 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 ALDH3A1P30838 453 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 KRT32Q14532 448 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 DDX12PQ92771 950 aa10.43□□□□□ -0.74
SMC6-207ENST00000448223 PPFIA2O75334 1257 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 LARGE1O95461 756 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 HAND2P61296 217 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 NMIQ13287 307 aaPredicted RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 PRPF4BQ13523 1007 aaKnown RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 PHLDB2Q86SQ0 1253 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 CCDC77Q9BR77 488 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 RABEP2Q9H5N1 569 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 NEURL4Q96JN8 1562 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 HECW2Q9P2P5 1572 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 KIF24Q5T7B8 1368 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 GIGYF1O75420 1035 aaPredicted RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 FERP16591 822 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 APBB1IPQ7Z5R6 666 aaPredicted RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 DNAJC25Q9H1X3 360 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 VCX3AQ9NNX9 186 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 MCTP2Q6DN12 878 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 CLEC17AQ6ZS10 378 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 UBE3BQ7Z3V4 1068 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 ARHGEF28Q8N1W1 1705 aaKnown RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 LOC102724159A0A0B4J2E5 919 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 PRAMEF22A3QJZ6 481 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 CYP2E1P05181 493 aaPredicted RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 VIMP08670 466 aaKnown RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 ANAPC15P60006 121 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 PWP2Q15269 919 aaKnown RBP10.42□□□□□ -0.74
SMC6-207ENST00000448223 CEP131Q9UPN4 1083 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 PTPRMP28827 1452 aa10.42□□□□□ -0.74
SMC6-207ENST00000448223 MAP7D1Q3KQU3 841 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 HSP90AA4PQ58FG1 418 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 TRIM68Q6AZZ1 485 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 BRF1Q92994 677 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 USH1CQ9Y6N9 552 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 ZNF500O60304 480 aaPredicted RBP10.41□□□□□ -0.74
SMC6-207ENST00000448223 ERCC3P19447 782 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 PSMC4P43686 418 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 KAT6BQ8WYB5 2073 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 SNCBQ16143 134 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 CCDC92Q53HC0 331 aaPredicted RBP10.41□□□□□ -0.74
SMC6-207ENST00000448223 EFCAB13Q8IY85 973 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 N4BP2L2Q92802 583 aaPredicted RBP10.41□□□□□ -0.74
SMC6-207ENST00000448223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMC6-207ENST00000448223 SGSM2O43147 1006 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 RUFY3Q7L099 469 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 SPATS2Q86XZ4 545 aaKnown RBP10.41□□□□□ -0.74
SMC6-207ENST00000448223 CNNM3Q8NE01 707 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 ZC4H2Q9NQZ6 224 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 IFT172Q9UG01 1749 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 HIP1RO75146 1068 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 ZWINTO95229 277 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 STMN1P16949 149 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 LTKP29376 864 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 IQCGQ9H095 443 aaKnown RBP10.41□□□□□ -0.74
SMC6-207ENST00000448223 IKBKGQ9Y6K9 419 aa10.41□□□□□ -0.74
SMC6-207ENST00000448223 NOP2P46087 812 aaKnown RBP10.4□□□□□ -0.74
SMC6-207ENST00000448223 TPD52P55327 224 aaPredicted RBP10.4□□□□□ -0.74
SMC6-207ENST00000448223 CCDC57Q2TAC2 916 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 ABTB1Q969K4 478 aaPredicted RBP10.4□□□□□ -0.74
SMC6-207ENST00000448223 UBAC1Q9BSL1 405 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 SLC24A3Q9HC58 644 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 CD163L1Q9NR16 1453 aa10.4□□□□□ -0.74
SMC6-207ENST00000448223 POLR3DP05423 398 aaPredicted RBP10.4□□□□□ -0.74
SMC6-207ENST00000448223 HPDP32754 393 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms