RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NAA16Q6N069 864 aaPredicted RBP23.52■■□□□ 1.36
SGCE-207ENST00000447873 TCRBV5S4A2TA0A5A2 114 aa23.51■■□□□ 1.35
SGCE-207ENST00000447873 REC8O95072 547 aa23.51■■□□□ 1.35
SGCE-207ENST00000447873 NSUN4Q96CB9 384 aaKnown RBP23.51■■□□□ 1.35
SGCE-207ENST00000447873 SEC62Q99442 399 aaKnown RBP23.51■■□□□ 1.35
SGCE-207ENST00000447873 IL25Q9H293 177 aa23.51■■□□□ 1.35
SGCE-207ENST00000447873 GRIK5Q16478 980 aa23.5■■□□□ 1.35
SGCE-207ENST00000447873 GPR162Q16538 588 aa23.5■■□□□ 1.35
SGCE-207ENST00000447873 DACT2Q5SW24 774 aa23.5■■□□□ 1.35
SGCE-207ENST00000447873 TMED8Q6PL24 325 aaPredicted RBP23.5■■□□□ 1.35
SGCE-207ENST00000447873 OSBP2Q969R2 916 aa23.5■■□□□ 1.35
SGCE-207ENST00000447873 SUGT1Q9Y2Z0 365 aa23.5■■□□□ 1.35
SGCE-207ENST00000447873 ZNF646O15015 1829 aaPredicted RBP23.5■■□□□ 1.35
SGCE-207ENST00000447873 RAD17O75943 681 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 CYP7A1P22680 504 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 PRELPP51888 382 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 FKBP1AP62942 108 aaKnown RBP23.49■■□□□ 1.35
SGCE-207ENST00000447873 KIAA1211Q6ZU35 1233 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 CERS5Q8N5B7 392 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 MXD3Q9BW11 206 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 UPF2Q9HAU5 1272 aaKnown RBP23.49■■□□□ 1.35
SGCE-207ENST00000447873 SBF1O95248 1867 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 MAST3O60307 1309 aa23.49■■□□□ 1.35
SGCE-207ENST00000447873 LMNB1P20700 586 aa23.48■■□□□ 1.35
SGCE-207ENST00000447873 GSTO1P78417 241 aa23.48■■□□□ 1.35
SGCE-207ENST00000447873 PUS7LQ9H0K6 701 aaKnown RBP23.48■■□□□ 1.35
SGCE-207ENST00000447873 ANO2Q9NQ90 1003 aa23.48■■□□□ 1.35
SGCE-207ENST00000447873 DICER1Q9UPY3 1922 aaKnown RBP23.48■■□□□ 1.35
SGCE-207ENST00000447873 M0R2C6 588 aa23.48■■□□□ 1.35
SGCE-207ENST00000447873 ZNF384Q8TF68 577 aa23.48■■□□□ 1.35
SGCE-207ENST00000447873 MYH2Q9UKX2 1941 aa23.47■■□□□ 1.35
SGCE-207ENST00000447873 CCDC129Q6ZRS4 1044 aa23.47■■□□□ 1.35
SGCE-207ENST00000447873 ZNF589Q86UQ0 364 aaPredicted RBP23.47■■□□□ 1.35
SGCE-207ENST00000447873 CCDC171Q6TFL3 1326 aa23.46■■□□□ 1.35
SGCE-207ENST00000447873 F8W031 263 aaPredicted RBP23.46■■□□□ 1.35
SGCE-207ENST00000447873 SLF2Q8IX21 1173 aa23.46■■□□□ 1.35
SGCE-207ENST00000447873 AIDAQ96BJ3 306 aa23.46■■□□□ 1.35
SGCE-207ENST00000447873 TTF2Q9UNY4 1162 aaKnown RBP23.46■■□□□ 1.35
SGCE-207ENST00000447873 PSMD14O00487 310 aa23.45■■□□□ 1.34
SGCE-207ENST00000447873 LDHCP07864 332 aa23.45■■□□□ 1.34
SGCE-207ENST00000447873 CXCL9Q07325 125 aa23.45■■□□□ 1.34
SGCE-207ENST00000447873 ADGRA1Q86SQ6 560 aa23.45■■□□□ 1.34
SGCE-207ENST00000447873 MYO3BQ8WXR4 1341 aa23.45■■□□□ 1.34
SGCE-207ENST00000447873 GRIN3BO60391 1043 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 VIL1P09327 827 aaKnown RBP23.44■■□□□ 1.34
SGCE-207ENST00000447873 DIXDC1Q155Q3 683 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 CIAPIN1Q6FI81 312 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 MIGA1Q8NAN2 632 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 FZD9O00144 591 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 GPAA1O43292 621 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 EIF6P56537 245 aaKnown RBP23.44■■□□□ 1.34
SGCE-207ENST00000447873 TNIP1Q15025 636 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 RSBN1LQ6PCB5 846 aaPredicted RBP23.44■■□□□ 1.34
SGCE-207ENST00000447873 KIAA0825Q8IV33 1275 aa23.44■■□□□ 1.34
SGCE-207ENST00000447873 MAGEB6P1A0A0J9YX57 407 aa23.43■■□□□ 1.34
SGCE-207ENST00000447873 MBD4O95243 580 aa23.43■■□□□ 1.34
SGCE-207ENST00000447873 USP26Q9BXU7 913 aa23.43■■□□□ 1.34
SGCE-207ENST00000447873 LSG1Q9H089 658 aaKnown RBP23.43■■□□□ 1.34
SGCE-207ENST00000447873 UTRNP46939 3433 aa23.43■■□□□ 1.34
SGCE-207ENST00000447873 NOL10Q9BSC4 688 aaKnown RBP23.42■■□□□ 1.34
SGCE-207ENST00000447873 MROH7-TTC4A0A0A0MT08 1334 aa23.42■■□□□ 1.34
SGCE-207ENST00000447873 FAM163AQ96GL9 167 aaPredicted RBP23.41■■□□□ 1.34
SGCE-207ENST00000447873 STRBPQ96SI9 672 aaKnown RBP23.41■■□□□ 1.34
SGCE-207ENST00000447873 ARMT1Q9H993 441 aa23.41■■□□□ 1.34
SGCE-207ENST00000447873 EPB41L2O43491 1005 aaKnown RBP23.4■■□□□ 1.34
SGCE-207ENST00000447873 SCNN1DP51172 638 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 PTH1RQ03431 593 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 AATFQ9NY61 560 aaKnown RBP eCLIP23.4■■□□□ 1.34
SGCE-207ENST00000447873 RNF181Q9P0P0 153 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 BAG3O95817 575 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 HSPD1P10809 573 aaKnown RBP23.4■■□□□ 1.34
SGCE-207ENST00000447873 LCORLQ8N3X6 602 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 AGBL3Q8NEM8 1001 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 TEKT1Q969V4 418 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 RIOK1Q9BRS2 568 aaKnown RBP23.4■■□□□ 1.34
SGCE-207ENST00000447873 C22orf23Q9BZE7 217 aa23.4■■□□□ 1.34
SGCE-207ENST00000447873 ZBTB12Q9Y330 459 aaPredicted RBP23.4■■□□□ 1.34
SGCE-207ENST00000447873 GNAT2P19087 354 aa23.39■■□□□ 1.33
SGCE-207ENST00000447873 DYNLL1P63167 89 aaKnown RBP23.39■■□□□ 1.33
SGCE-207ENST00000447873 VPS53Q5VIR6 699 aa23.39■■□□□ 1.33
SGCE-207ENST00000447873 MAP4K1Q92918 833 aa23.39■■□□□ 1.33
SGCE-207ENST00000447873 GAKO14976 1311 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 GPR75-ASB3A0A0A6YYF3 556 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 HDLBPQ00341 1268 aaKnown RBP23.38■■□□□ 1.33
SGCE-207ENST00000447873 HHIPL2Q6UWX4 724 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 GMLQ99445 158 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 DSCC1Q9BVC3 393 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 MRIQ9BWK5 157 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 HDAC9Q9UKV0 1011 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 DAGLAQ9Y4D2 1042 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 GJA3Q9Y6H8 435 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 TIAM2Q8IVF5 1701 aa23.38■■□□□ 1.33
SGCE-207ENST00000447873 APPP05067 770 aa23.37■■□□□ 1.33
SGCE-207ENST00000447873 BTDP43251 543 aa23.37■■□□□ 1.33
SGCE-207ENST00000447873 C9orf131Q5VYM1 1079 aa23.37■■□□□ 1.33
SGCE-207ENST00000447873 CERS3Q8IU89 383 aa23.37■■□□□ 1.33
SGCE-207ENST00000447873 OGFOD1Q8N543 542 aa23.37■■□□□ 1.33
SGCE-207ENST00000447873 SERPINA10Q9UK55 444 aa23.37■■□□□ 1.33
SGCE-207ENST00000447873 SLC4A4Q9Y6R1 1079 aa23.37■■□□□ 1.33
SGCE-207ENST00000447873 MCCP23508 829 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms