RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 KIF3AQ9Y496 699 aa11□□□□□ -0.65
KLHL3-202ENST00000447439 DCCP43146 1447 aa11□□□□□ -0.65
KLHL3-202ENST00000447439 MAP3K15Q6ZN16 1313 aa11□□□□□ -0.65
KLHL3-202ENST00000447439 CDC27P30260 824 aa11□□□□□ -0.65
KLHL3-202ENST00000447439 CTSWP56202 376 aa11□□□□□ -0.65
KLHL3-202ENST00000447439 CTDSPL2Q05D32 466 aa11□□□□□ -0.65
KLHL3-202ENST00000447439 ZMYND15Q9H091 742 aa11□□□□□ -0.65
KLHL3-202ENST00000447439 TNS2Q63HR2 1409 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 NEDD4P46934 1319 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 WDHD1O75717 1129 aaPredicted RBP10.99□□□□□ -0.65
KLHL3-202ENST00000447439 CCDC102BQ68D86 513 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 GIGYF2Q6Y7W6 1299 aaKnown RBP10.99□□□□□ -0.65
KLHL3-202ENST00000447439 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 FBXO18Q8NFZ0 1043 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 ZKSCAN3Q9BRR0 538 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 IQSEC3Q9UPP2 1182 aaPredicted RBP10.99□□□□□ -0.65
KLHL3-202ENST00000447439 MROH7-TTC4A0A0A0MT08 1334 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 ANKRD18BA2A2Z9 1011 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 STARD3NLO95772 234 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 ADD2P35612 726 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 TPD52L1Q16890 204 aaPredicted RBP10.99□□□□□ -0.65
KLHL3-202ENST00000447439 MYSM1Q5VVJ2 828 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 CMTR1Q8N1G2 835 aaKnown RBP10.99□□□□□ -0.65
KLHL3-202ENST00000447439 RTEL1Q9NZ71 1219 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 MYH15Q9Y2K3 1946 aa10.99□□□□□ -0.65
KLHL3-202ENST00000447439 SPTLC2O15270 562 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 PRKAB2O43741 272 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 TPM3P06753 285 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 TNNT1P13805 278 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.98□□□□□ -0.65
KLHL3-202ENST00000447439 SEC31BQ9NQW1 1179 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
KLHL3-202ENST00000447439 UBN2Q6ZU65 1347 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 TOGARAM1Q9Y4F4 1720 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 WTIPA6NIX2 430 aaPredicted RBP10.98□□□□□ -0.65
KLHL3-202ENST00000447439 SMIM22K7EJ46 135 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 ZFYP08048 801 aaPredicted RBP10.98□□□□□ -0.65
KLHL3-202ENST00000447439 PDE6AP16499 860 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 KIF23Q02241 960 aaPredicted RBP10.98□□□□□ -0.65
KLHL3-202ENST00000447439 CHAF1AQ13111 956 aaPredicted RBP10.98□□□□□ -0.65
KLHL3-202ENST00000447439 RRP12Q5JTH9 1297 aaKnown RBP10.98□□□□□ -0.65
KLHL3-202ENST00000447439 SPECC1Q5M775 1068 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 NFXL1Q6ZNB6 911 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 CLIC6Q96NY7 704 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 ALG1Q9BT22 464 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 ARMT1Q9H993 441 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 KAT6BQ8WYB5 2073 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 UBR2Q8IWV8 1755 aa10.98□□□□□ -0.65
KLHL3-202ENST00000447439 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 CYP19A1P11511 503 aaPredicted RBP10.97□□□□□ -0.65
KLHL3-202ENST00000447439 METAP2P50579 478 aaKnown RBP eCLIP10.97□□□□□ -0.65
KLHL3-202ENST00000447439 ADALQ6DHV7 355 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 LRRC8AQ8IWT6 810 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 VGLL2Q8N8G2 317 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 TOMM22Q9NS69 142 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 ANO10Q9NW15 660 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 SPEF2Q9C093 1822 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 CCDC69A6NI79 296 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 SMC2O95347 1197 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 PFKFB1P16118 471 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 EVCP57679 992 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 CBX1P83916 185 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 TRDNQ13061 729 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 HSP90AA4PQ58FG1 418 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 SYNE3Q6ZMZ3 975 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 CEP57L1Q8IYX8 460 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 MAGEB6Q8N7X4 407 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.97□□□□□ -0.65
KLHL3-202ENST00000447439 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.97□□□□□ -0.65
KLHL3-202ENST00000447439 V9GYY5 206 aaPredicted RBP10.97□□□□□ -0.65
KLHL3-202ENST00000447439 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
KLHL3-202ENST00000447439 CTAGE5O15320 804 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 RANBP6O60518 1105 aaKnown RBP10.96□□□□□ -0.65
KLHL3-202ENST00000447439 ZNF202O95125 648 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 MBD4O95243 580 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 PDE8BO95263 885 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 SKILP12757 684 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 TRIM28Q13263 835 aaKnown RBP10.96□□□□□ -0.65
KLHL3-202ENST00000447439 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 ANO1Q5XXA6 986 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 DZIP3Q86Y13 1208 aaKnown RBP10.96□□□□□ -0.65
KLHL3-202ENST00000447439 MIGA1Q8NAN2 632 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 ACSBG1Q96GR2 724 aa10.96□□□□□ -0.65
KLHL3-202ENST00000447439 EPB41L4AQ9HCS5 686 aaPredicted RBP10.96□□□□□ -0.65
KLHL3-202ENST00000447439 SH2B2O14492 632 aaPredicted RBP10.96□□□□□ -0.66
KLHL3-202ENST00000447439 GUCY1A2P33402 732 aa10.96□□□□□ -0.66
KLHL3-202ENST00000447439 GTF2F1P35269 517 aaKnown RBP eCLIP10.96□□□□□ -0.66
KLHL3-202ENST00000447439 GNL2Q13823 731 aaKnown RBP10.96□□□□□ -0.66
KLHL3-202ENST00000447439 LRRFIP1Q32MZ4 808 aaKnown RBP10.96□□□□□ -0.66
KLHL3-202ENST00000447439 KRT40Q6A162 431 aa10.96□□□□□ -0.66
KLHL3-202ENST00000447439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.96□□□□□ -0.66
KLHL3-202ENST00000447439 VPS37DQ86XT2 251 aa10.96□□□□□ -0.66
KLHL3-202ENST00000447439 AIDAQ96BJ3 306 aa10.96□□□□□ -0.66
KLHL3-202ENST00000447439 PLA2G12BQ9BX93 195 aa10.96□□□□□ -0.66
KLHL3-202ENST00000447439 KIAA1468Q9P260 1216 aa10.96□□□□□ -0.66
KLHL3-202ENST00000447439 ANGEL1Q9UNK9 670 aaKnown RBP10.96□□□□□ -0.66
KLHL3-202ENST00000447439 AXDND1Q5T1B0 1012 aaPredicted RBP10.95□□□□□ -0.66
KLHL3-202ENST00000447439 APOA5Q6Q788 366 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms