RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, human

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPE-213	ENST00000445268	FAM122A	Q96E09	287 aa		11.93	□□□□□ -0.5
RPE-213	ENST00000445268	TEPSIN	Q96N21	525 aa		11.93	□□□□□ -0.5
RPE-213	ENST00000445268	JAG2	Q9Y219	1238 aa		11.93	□□□□□ -0.5
RPE-213	ENST00000445268	CSAD	Q9Y600	493 aa		11.93	□□□□□ -0.5
RPE-213	ENST00000445268	POTEB2	H3BUK9	544 aa		11.92	□□□□□ -0.5
RPE-213	ENST00000445268	IRF6	O14896	467 aa		11.92	□□□□□ -0.5
RPE-213	ENST00000445268	MAP3K9	P80192	1104 aa		11.92	□□□□□ -0.5
RPE-213	ENST00000445268	NECAB2	Q7Z6G3	386 aa		11.92	□□□□□ -0.5
RPE-213	ENST00000445268	TMEM39B	Q9GZU3	492 aa		11.92	□□□□□ -0.5
RPE-213	ENST00000445268	ZCCHC17	Q9NP64	241 aa	Known RBP	11.92	□□□□□ -0.5
RPE-213	ENST00000445268	TMEM265	A0A087WTH1	108 aa		11.91	□□□□□ -0.5
RPE-213	ENST00000445268	ADCY3	O60266	1144 aa		11.91	□□□□□ -0.5
RPE-213	ENST00000445268	RBM5	P52756	815 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
RPE-213	ENST00000445268	PLEKHF1	Q96S99	279 aa		11.91	□□□□□ -0.5
RPE-213	ENST00000445268	CDC5L	Q99459	802 aa	Known RBP	11.91	□□□□□ -0.5
RPE-213	ENST00000445268	CRISPLD2	Q9H0B8	497 aa		11.91	□□□□□ -0.5
RPE-213	ENST00000445268	PAK6	Q9NQU5	681 aa	Predicted RBP	11.91	□□□□□ -0.5
RPE-213	ENST00000445268	TCP10L2	B9ZVM9	353 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	NEFM	P07197	916 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	PPP2R1A	P30153	589 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	HOXD11	P31277	338 aa	Predicted RBP	11.9	□□□□□ -0.5
RPE-213	ENST00000445268	CTSW	P56202	376 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	TRIM28	Q13263	835 aa	Known RBP	11.9	□□□□□ -0.5
RPE-213	ENST00000445268	SNAPC2	Q13487	334 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	SPDYE2	Q495Y8	402 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	HDGFL1	Q5TGJ6	251 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.9	□□□□□ -0.5
RPE-213	ENST00000445268	CDX2	Q99626	313 aa	Predicted RBP	11.9	□□□□□ -0.5
RPE-213	ENST00000445268	MYD88	Q99836	296 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	GREM2	Q9H772	168 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	CD209	Q9NNX6	404 aa		11.9	□□□□□ -0.5
RPE-213	ENST00000445268	BSDC1	Q9NW68	430 aa	Predicted RBP	11.9	□□□□□ -0.5
RPE-213	ENST00000445268	ZNF70	Q9UC06	446 aa	Predicted RBP	11.9	□□□□□ -0.5
RPE-213	ENST00000445268	AK9	Q5TCS8	1911 aa		11.9	□□□□□ -0.51
RPE-213	ENST00000445268	SNAP23	O00161	211 aa		11.89	□□□□□ -0.51
RPE-213	ENST00000445268	PDHX	O00330	501 aa		11.89	□□□□□ -0.51
RPE-213	ENST00000445268	PCCA	P05165	728 aa	Predicted RBP	11.89	□□□□□ -0.51
RPE-213	ENST00000445268	FCGRT	P55899	365 aa		11.89	□□□□□ -0.51
RPE-213	ENST00000445268	MDM2	Q00987	491 aa	Predicted RBP	11.89	□□□□□ -0.51
RPE-213	ENST00000445268	ZNF697	Q5TEC3	545 aa		11.89	□□□□□ -0.51
RPE-213	ENST00000445268	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.89	□□□□□ -0.51
RPE-213	ENST00000445268	ERO1B	Q86YB8	467 aa		11.89	□□□□□ -0.51
RPE-213	ENST00000445268	HELB	Q8NG08	1087 aa	Predicted RBP	11.89	□□□□□ -0.51
RPE-213	ENST00000445268	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.89	□□□□□ -0.51
RPE-213	ENST00000445268	TDRD3	Q9H7E2	651 aa	Known RBP	11.89	□□□□□ -0.51
RPE-213	ENST00000445268	TAOK2	Q9UL54	1235 aa		11.89	□□□□□ -0.51
RPE-213	ENST00000445268	NCOR1	O75376	2440 aa		11.89	□□□□□ -0.51
RPE-213	ENST00000445268	FAM205A	Q6ZU69	1335 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	MAST2	Q6P0Q8	1798 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	TNFRSF10A	O00220	468 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	FLT3LG	P49771	235 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	PPIL2	Q13356	520 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	TNFAIP1	Q13829	316 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	MYLIP	Q8WY64	445 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	SYMPK	Q92797	1274 aa	Known RBP	11.88	□□□□□ -0.51
RPE-213	ENST00000445268	WRNIP1	Q96S55	665 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
RPE-213	ENST00000445268	TIMELESS	Q9UNS1	1208 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	LEMD3	Q9Y2U8	911 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	LTBP2	Q14767	1821 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	PTPRF	P10586	1907 aa		11.88	□□□□□ -0.51
RPE-213	ENST00000445268	BCR	P11274	1271 aa		11.87	□□□□□ -0.51
RPE-213	ENST00000445268	HSP90B1	P14625	803 aa	Known RBP	11.87	□□□□□ -0.51
RPE-213	ENST00000445268	RIC3	Q7Z5B4	369 aa		11.87	□□□□□ -0.51
RPE-213	ENST00000445268	ANKRD23	Q86SG2	305 aa		11.87	□□□□□ -0.51
RPE-213	ENST00000445268	PFAS	O15067	1338 aa		11.86	□□□□□ -0.51
RPE-213	ENST00000445268	CYP2C8	P10632	490 aa		11.86	□□□□□ -0.51
RPE-213	ENST00000445268	TTLL11	Q8NHH1	800 aa		11.86	□□□□□ -0.51
RPE-213	ENST00000445268	CWC25	Q9NXE8	425 aa	Predicted RBP	11.86	□□□□□ -0.51
RPE-213	ENST00000445268	FRMPD3	Q5JV73	1810 aa		11.86	□□□□□ -0.51
RPE-213	ENST00000445268	MAPK8IP3	Q9UPT6	1336 aa		11.86	□□□□□ -0.51
RPE-213	ENST00000445268	KCNJ4	P48050	445 aa		11.85	□□□□□ -0.51
RPE-213	ENST00000445268	CACNB3	P54284	484 aa		11.85	□□□□□ -0.51
RPE-213	ENST00000445268	MOGS	Q13724	837 aa		11.85	□□□□□ -0.51
RPE-213	ENST00000445268	USP38	Q8NB14	1042 aa		11.85	□□□□□ -0.51
RPE-213	ENST00000445268	CCDC191	Q8NCU4	936 aa		11.85	□□□□□ -0.51
RPE-213	ENST00000445268	NBPF3	Q9H094	633 aa		11.85	□□□□□ -0.51
RPE-213	ENST00000445268	C11orf49	Q9H6J7	331 aa		11.85	□□□□□ -0.51
RPE-213	ENST00000445268	DBF4	Q9UBU7	674 aa	Predicted RBP	11.85	□□□□□ -0.51
RPE-213	ENST00000445268	INPP5B	P32019	993 aa		11.84	□□□□□ -0.51
RPE-213	ENST00000445268	GOLGA2	Q08379	1002 aa		11.84	□□□□□ -0.51
RPE-213	ENST00000445268	MAP3K12	Q12852	859 aa		11.84	□□□□□ -0.51
RPE-213	ENST00000445268	TJAP1	Q5JTD0	557 aa		11.84	□□□□□ -0.51
RPE-213	ENST00000445268	ANKLE1	Q8NAG6	615 aa		11.84	□□□□□ -0.51
RPE-213	ENST00000445268	PXYLP1	Q8TE99	480 aa		11.84	□□□□□ -0.51
RPE-213	ENST00000445268	PARK7	Q99497	189 aa	Known RBP	11.84	□□□□□ -0.51
RPE-213	ENST00000445268	PHAX	Q9H814	394 aa	Known RBP	11.84	□□□□□ -0.51
RPE-213	ENST00000445268	PLXNB2	O15031	1838 aa		11.83	□□□□□ -0.51
RPE-213	ENST00000445268	DNAH12	Q6ZR08	3092 aa		11.83	□□□□□ -0.52
RPE-213	ENST00000445268	TNPO2	O14787	897 aa	Known RBP	11.83	□□□□□ -0.52
RPE-213	ENST00000445268	FOSL2	P15408	326 aa		11.83	□□□□□ -0.52
RPE-213	ENST00000445268	IGHMBP2	P38935	993 aa	Known RBP	11.83	□□□□□ -0.52
RPE-213	ENST00000445268	CHRND	Q07001	517 aa		11.83	□□□□□ -0.52
RPE-213	ENST00000445268	TRIM32	Q13049	653 aa		11.83	□□□□□ -0.52
RPE-213	ENST00000445268	DZIP1L	Q8IYY4	767 aa	Known RBP	11.83	□□□□□ -0.52
RPE-213	ENST00000445268	SEMA6B	Q9H3T3	888 aa		11.83	□□□□□ -0.52
RPE-213	ENST00000445268	BABAM1	Q9NWV8	329 aa		11.83	□□□□□ -0.52
RPE-213	ENST00000445268	HYPK	Q9NX55	129 aa		11.83	□□□□□ -0.52
RPE-213	ENST00000445268	TAF5L	O75529	589 aa		11.82	□□□□□ -0.52
RPE-213	ENST00000445268	TNNI2	P48788	182 aa		11.82	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms