RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 LRP2BPQ9P2M1 347 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 SNAP23O00161 211 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 DHX58Q96C10 678 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 TMEM51Q9NW97 253 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
HCFC1-203ENST00000444191 MAPK8IP1Q9UQF2 711 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 USP31Q70CQ4 1352 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 CARMIL3Q8ND23 1372 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 CDKL5O76039 1030 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
HCFC1-203ENST00000444191 KRT40Q6A162 431 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 NEK11Q8NG66 645 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
HCFC1-203ENST00000444191 DENND2AQ9ULE3 1009 aa13.39□□□□□ -0.27
HCFC1-203ENST00000444191 POLR2DO15514 142 aaKnown RBP13.38□□□□□ -0.27
HCFC1-203ENST00000444191 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 MYL5Q02045 173 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 CTDSPL2Q05D32 466 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
HCFC1-203ENST00000444191 HINFPQ9BQA5 517 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 GYS2P54840 703 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 SSRP1Q08945 709 aaKnown RBP13.38□□□□□ -0.27
HCFC1-203ENST00000444191 DHX40Q8IX18 779 aaKnown RBP13.38□□□□□ -0.27
HCFC1-203ENST00000444191 GOLGA6L1Q8N7Z2 621 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 MPHOSPH8Q99549 860 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 UBAC1Q9BSL1 405 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 PUS7LQ9H0K6 701 aaKnown RBP13.38□□□□□ -0.27
HCFC1-203ENST00000444191 ZCCHC17Q9NP64 241 aaKnown RBP13.38□□□□□ -0.27
HCFC1-203ENST00000444191 CTDNEP1O95476 244 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 LINC00301Q8NCQ3 95 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 EEF2KMTQ96G04 330 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 HELLSQ9NRZ9 838 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 AKAP2Q9Y2D5 859 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 PREX1Q8TCU6 1659 aa13.38□□□□□ -0.27
HCFC1-203ENST00000444191 REREQ9P2R6 1566 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 TMEM232C9JQI7 657 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 CCP110O43303 1012 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 RANBP6O60518 1105 aaKnown RBP13.37□□□□□ -0.27
HCFC1-203ENST00000444191 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
HCFC1-203ENST00000444191 ARHGEF25Q86VW2 580 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 SMARCE1Q969G3 411 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.37□□□□□ -0.275e-8■■■■□ 20.1
HCFC1-203ENST00000444191 HSP90B2PQ58FF3 399 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 LRRN4CLQ8ND94 238 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 KCNH3Q9ULD8 1083 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 NLRP12P59046 1061 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 ZNF609O15014 1411 aa13.37□□□□□ -0.27
HCFC1-203ENST00000444191 CCT6AP40227 531 aaKnown RBP13.36□□□□□ -0.27
HCFC1-203ENST00000444191 PLBD2Q8NHP8 589 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 BAG1Q99933 345 aaPredicted RBP13.36□□□□□ -0.27
HCFC1-203ENST00000444191 RAI14Q9P0K7 980 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 UBE2Q2LH0YL09 131 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 PHKG2P15735 406 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 DPF2Q92785 391 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 DDX41Q9UJV9 622 aaKnown RBP13.36□□□□□ -0.27
HCFC1-203ENST00000444191 PCDHA5Q9Y5H7 936 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 FOXN1O15353 648 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 SCARF1Q14162 830 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 FILIP1LQ4L180 1135 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 ANKRD7Q92527 254 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 CABP5Q9NP86 173 aa13.36□□□□□ -0.27
HCFC1-203ENST00000444191 PRDM1O75626 825 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 DNA2P51530 1060 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 CCZ1BP86790 482 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 CCZ1P86791 482 aaPredicted RBP13.35□□□□□ -0.27
HCFC1-203ENST00000444191 ARMCX5Q6P1M9 558 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
HCFC1-203ENST00000444191 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 GDAP1L1Q96MZ0 367 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 PLIN2Q99541 437 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
HCFC1-203ENST00000444191 CASP1P29466 404 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
HCFC1-203ENST00000444191 ZMYM1Q5SVZ6 1142 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 TRIM34Q9BYJ4 488 aa13.35□□□□□ -0.27
HCFC1-203ENST00000444191 KIF28PB7ZC32 967 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 CLCN6P51797 869 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 PPARDQ03181 441 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 FKBP15Q5T1M5 1219 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
HCFC1-203ENST00000444191 DSCC1Q9BVC3 393 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 ARFGAP3Q9NP61 516 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
HCFC1-203ENST00000444191 E4F1Q66K89 784 aaPredicted RBP13.34□□□□□ -0.27
HCFC1-203ENST00000444191 SMYD4Q8IYR2 804 aaPredicted RBP13.34□□□□□ -0.27
HCFC1-203ENST00000444191 FMR1NBQ8N0W7 255 aaPredicted RBP13.34□□□□□ -0.27
HCFC1-203ENST00000444191 MAGEB6Q8N7X4 407 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
HCFC1-203ENST00000444191 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 317.1 ms