RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 RASA3Q14644 834 aa17.43■□□□□ 0.38
TREX1-202ENST00000444177 PUM3Q15397 648 aaKnown RBP17.43■□□□□ 0.38
TREX1-202ENST00000444177 GRIK5Q16478 980 aa17.43■□□□□ 0.38
TREX1-202ENST00000444177 MAP3K11Q16584 847 aa17.43■□□□□ 0.38
TREX1-202ENST00000444177 NBPF12Q5TAG4 269 aaPredicted RBP17.43■□□□□ 0.38
TREX1-202ENST00000444177 DZIP1LQ8IYY4 767 aaKnown RBP17.43■□□□□ 0.38
TREX1-202ENST00000444177 SLC10A4Q96EP9 437 aa17.43■□□□□ 0.38
TREX1-202ENST00000444177 TDRD3Q9H7E2 651 aaKnown RBP17.43■□□□□ 0.38
TREX1-202ENST00000444177 ZNF70Q9UC06 446 aaPredicted RBP17.43■□□□□ 0.38
TREX1-202ENST00000444177 GNAI2P04899 355 aa17.42■□□□□ 0.38
TREX1-202ENST00000444177 IFIT1P09914 478 aaKnown RBP17.42■□□□□ 0.38
TREX1-202ENST00000444177 CRKP46108 304 aa17.42■□□□□ 0.38
TREX1-202ENST00000444177 SPDYE2Q495Y8 402 aa17.42■□□□□ 0.38
TREX1-202ENST00000444177 SPRYD7Q5W111 196 aa17.42■□□□□ 0.38
TREX1-202ENST00000444177 ATG9AQ7Z3C6 839 aa17.42■□□□□ 0.38
TREX1-202ENST00000444177 ITPRIPQ8IWB1 547 aa17.42■□□□□ 0.38
TREX1-202ENST00000444177 TBC1D22AQ8WUA7 517 aa17.42■□□□□ 0.38
TREX1-202ENST00000444177 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
TREX1-202ENST00000444177 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
TREX1-202ENST00000444177 TBC1D8O95759 1140 aa17.41■□□□□ 0.38
TREX1-202ENST00000444177 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
TREX1-202ENST00000444177 UNCXA6NJT0 531 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 USP2O75604 605 aaPredicted RBP17.4■□□□□ 0.38
TREX1-202ENST00000444177 CIAO1O76071 339 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 RLBP1P12271 317 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
TREX1-202ENST00000444177 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 TNFAIP1Q13829 316 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 LPIN2Q92539 896 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 CLMNQ96JQ2 1002 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 MRIQ9BWK5 157 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
TREX1-202ENST00000444177 FBXO3Q9UK99 471 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
TREX1-202ENST00000444177 SLC5A1P13866 664 aa17.39■□□□□ 0.37
TREX1-202ENST00000444177 IREB2P48200 963 aaKnown RBP17.39■□□□□ 0.37
TREX1-202ENST00000444177 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
TREX1-202ENST00000444177 TCP10L2B9ZVM9 353 aa17.38■□□□□ 0.37
TREX1-202ENST00000444177 IL15P40933 162 aaPredicted RBP17.38■□□□□ 0.37
TREX1-202ENST00000444177 MTX1Q13505 466 aa17.38■□□□□ 0.37
TREX1-202ENST00000444177 TEKT1Q969V4 418 aa17.38■□□□□ 0.37
TREX1-202ENST00000444177 TEPSINQ96N21 525 aa17.38■□□□□ 0.37
TREX1-202ENST00000444177 COPRSQ9NQ92 184 aa17.38■□□□□ 0.37
TREX1-202ENST00000444177 RCAN3Q9UKA8 241 aa17.38■□□□□ 0.37
TREX1-202ENST00000444177 SUGT1Q9Y2Z0 365 aa17.38■□□□□ 0.37
TREX1-202ENST00000444177 ECM29Q5VYK3 1845 aa17.37■□□□□ 0.37
TREX1-202ENST00000444177 INHBEP58166 350 aa17.37■□□□□ 0.37
TREX1-202ENST00000444177 ATP2B3Q16720 1220 aa17.37■□□□□ 0.37
TREX1-202ENST00000444177 CTU1Q7Z7A3 348 aaKnown RBP17.37■□□□□ 0.37
TREX1-202ENST00000444177 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
TREX1-202ENST00000444177 WNK4Q96J92 1243 aa17.37■□□□□ 0.37
TREX1-202ENST00000444177 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
TREX1-202ENST00000444177 MANSC4A6NHS7 340 aaPredicted RBP17.36■□□□□ 0.37
TREX1-202ENST00000444177 ZBTB48P10074 688 aaPredicted RBP17.36■□□□□ 0.37
TREX1-202ENST00000444177 TNNI2P48788 182 aa17.36■□□□□ 0.37
TREX1-202ENST00000444177 CDAN1Q8IWY9 1227 aa17.36■□□□□ 0.37
TREX1-202ENST00000444177 ANKRD13AQ8IZ07 590 aa17.36■□□□□ 0.37
TREX1-202ENST00000444177 WDR66Q8TBY9 1149 aa17.36■□□□□ 0.37
TREX1-202ENST00000444177 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
TREX1-202ENST00000444177 ZDHHC15Q96MV8 337 aa17.36■□□□□ 0.37
TREX1-202ENST00000444177 TMEM39BQ9GZU3 492 aa17.36■□□□□ 0.37
TREX1-202ENST00000444177 PNMA6EA0A0J9YXQ4 647 aa17.35■□□□□ 0.37
TREX1-202ENST00000444177 GPR25O00155 361 aa17.35■□□□□ 0.37
TREX1-202ENST00000444177 RGS19P49795 217 aa17.35■□□□□ 0.37
TREX1-202ENST00000444177 NOM1Q5C9Z4 860 aaKnown RBP17.35■□□□□ 0.37
TREX1-202ENST00000444177 APOBEC3HQ6NTF7 200 aaKnown RBP17.35■□□□□ 0.37
TREX1-202ENST00000444177 HHIPL2Q6UWX4 724 aa17.35■□□□□ 0.37
TREX1-202ENST00000444177 CFHR5Q9BXR6 569 aa17.35■□□□□ 0.37
TREX1-202ENST00000444177 R3HDMLQ9H3Y0 253 aa17.35■□□□□ 0.37
TREX1-202ENST00000444177 MYH13Q9UKX3 1938 aa17.35■□□□□ 0.37
TREX1-202ENST00000444177 MAST3O60307 1309 aa17.34■□□□□ 0.37
TREX1-202ENST00000444177 ALDH1A1P00352 501 aa17.34■□□□□ 0.37
TREX1-202ENST00000444177 MS4A1P11836 297 aa17.34■□□□□ 0.37
TREX1-202ENST00000444177 CACNB3P54284 484 aa17.34■□□□□ 0.37
TREX1-202ENST00000444177 IFNL1Q8IU54 200 aa17.34■□□□□ 0.37
TREX1-202ENST00000444177 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
TREX1-202ENST00000444177 ZBTB7BO15156 539 aaPredicted RBP17.33■□□□□ 0.36
TREX1-202ENST00000444177 GJA5P36382 358 aa17.33■□□□□ 0.36
TREX1-202ENST00000444177 YTHDC1Q96MU7 727 aaKnown RBP17.33■□□□□ 0.36
TREX1-202ENST00000444177 MAP3K9P80192 1104 aa17.32■□□□□ 0.36
TREX1-202ENST00000444177 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
TREX1-202ENST00000444177 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.32■□□□□ 0.36
TREX1-202ENST00000444177 FAM83AQ86UY5 434 aa17.32■□□□□ 0.36
TREX1-202ENST00000444177 ELP3Q9H9T3 547 aa17.32■□□□□ 0.36
TREX1-202ENST00000444177 TMOD2Q9NZR1 351 aa17.32■□□□□ 0.36
TREX1-202ENST00000444177 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
TREX1-202ENST00000444177 FKTNO75072 461 aa17.31■□□□□ 0.36
TREX1-202ENST00000444177 PHKA1P46020 1223 aa17.31■□□□□ 0.36
TREX1-202ENST00000444177 TIMM10P62072 90 aa17.31■□□□□ 0.36
TREX1-202ENST00000444177 MLLT1Q03111 559 aaPredicted RBP17.31■□□□□ 0.36
TREX1-202ENST00000444177 TFCP2Q12800 502 aa17.31■□□□□ 0.36
TREX1-202ENST00000444177 G3BP1Q13283 466 aaKnown RBP eCLIP17.31■□□□□ 0.36
TREX1-202ENST00000444177 PKN2Q16513 984 aaKnown RBP17.31■□□□□ 0.36
TREX1-202ENST00000444177 SEMA3EO15041 775 aa17.3■□□□□ 0.36
TREX1-202ENST00000444177 ADORA1P30542 326 aa17.3■□□□□ 0.36
TREX1-202ENST00000444177 OS9Q13438 667 aaPredicted RBP17.3■□□□□ 0.36
TREX1-202ENST00000444177 MVPQ14764 893 aaKnown RBP17.3■□□□□ 0.36
TREX1-202ENST00000444177 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.36
TREX1-202ENST00000444177 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
TREX1-202ENST00000444177 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms