RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
EPHA4-209ENST00000443796 HRH3Q9Y5N1 445 aa9.57□□□□□ -0.88
EPHA4-209ENST00000443796 CGNL1Q0VF96 1302 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 MAP3K19Q56UN5 1328 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 LOC102724428A0A0B4J2F2 783 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 RHOQP17081 205 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 FBLN1P23142 703 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 SIK1P57059 783 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 POU4F2Q12837 409 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 ITPK1Q13572 414 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 GNASQ5JWF2 1037 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 USHBP1Q8N6Y0 703 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 PIGBQ92521 554 aa9.56□□□□□ -0.88
EPHA4-209ENST00000443796 CYP27B1O15528 508 aa9.55□□□□□ -0.88
EPHA4-209ENST00000443796 LGR5O75473 907 aa9.55□□□□□ -0.88
EPHA4-209ENST00000443796 VEGFAP15692 232 aaPredicted RBP9.55□□□□□ -0.88
EPHA4-209ENST00000443796 TMF1P82094 1093 aa9.55□□□□□ -0.88
EPHA4-209ENST00000443796 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
EPHA4-209ENST00000443796 DALRD3Q5D0E6 543 aaKnown RBP9.55□□□□□ -0.88
EPHA4-209ENST00000443796 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
EPHA4-209ENST00000443796 PIM2Q9P1W9 311 aa9.55□□□□□ -0.88
EPHA4-209ENST00000443796 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
EPHA4-209ENST00000443796 EDC4Q6P2E9 1401 aaKnown RBP9.55□□□□□ -0.88
EPHA4-209ENST00000443796 PCDH11XQ9BZA7 1347 aa9.55□□□□□ -0.88
EPHA4-209ENST00000443796 PCDH11YQ9BZA8 1340 aa9.55□□□□□ -0.88
EPHA4-209ENST00000443796 GLTPD2A6NH11 291 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 M0R2N6 131 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 TATP17735 454 aaPredicted RBP9.54□□□□□ -0.88
EPHA4-209ENST00000443796 PHKA2P46019 1235 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 AMPHP49418 695 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 NLGN1Q8N2Q7 840 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 RAPGEF4Q8WZA2 1011 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 ABHD8Q96I13 439 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 ZMIZ1Q9ULJ6 1067 aa9.54□□□□□ -0.88
EPHA4-209ENST00000443796 KDM6AO15550 1401 aaPredicted RBP9.54□□□□□ -0.88
EPHA4-209ENST00000443796 CDK2AP1O14519 115 aa9.53□□□□□ -0.88
EPHA4-209ENST00000443796 GYS1P13807 737 aa9.53□□□□□ -0.88
EPHA4-209ENST00000443796 CTCFP49711 727 aaPredicted RBP9.53□□□□□ -0.88
EPHA4-209ENST00000443796 RASSF7Q02833 373 aa9.53□□□□□ -0.88
EPHA4-209ENST00000443796 TBCELQ5QJ74 424 aa9.53□□□□□ -0.88
EPHA4-209ENST00000443796 TAS1R3Q7RTX0 852 aa9.53□□□□□ -0.88
EPHA4-209ENST00000443796 SLC12A5Q9H2X9 1139 aa9.53□□□□□ -0.88
EPHA4-209ENST00000443796 SCHIP1Q9P0W5 487 aaPredicted RBP9.53□□□□□ -0.88
EPHA4-209ENST00000443796 LBX1P52954 281 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 MLLT1Q03111 559 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-209ENST00000443796 MTFR1Q15390 333 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 TRAPPC3LQ5T215 181 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 TMEM164Q5U3C3 297 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 NBPF10Q6P3W6 841 aaKnown RBP9.52□□□□□ -0.89
EPHA4-209ENST00000443796 HDGFL2Q7Z4V5 671 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-209ENST00000443796 NBPF15Q8N660 670 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 TMC1Q8TDI8 760 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 ASAP1Q9ULH1 1129 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
EPHA4-209ENST00000443796 A0A1W2PP64 1363 aa9.51□□□□□ -0.89
EPHA4-209ENST00000443796 CNTNAP1P78357 1384 aa9.51□□□□□ -0.89
EPHA4-209ENST00000443796 SPATA31C2B4DYI2 1134 aa9.51□□□□□ -0.89
EPHA4-209ENST00000443796 CHRNA5P30532 468 aa9.51□□□□□ -0.89
EPHA4-209ENST00000443796 RGS19P49795 217 aa9.51□□□□□ -0.89
EPHA4-209ENST00000443796 SLC9A9Q8IVB4 645 aa9.51□□□□□ -0.89
EPHA4-209ENST00000443796 NIFKQ9BYG3 293 aaKnown RBP9.51□□□□□ -0.89
EPHA4-209ENST00000443796 TSPAN10Q9H1Z9 355 aaPredicted RBP9.51□□□□□ -0.89
EPHA4-209ENST00000443796 PDE4DIPQ5VU43 2346 aa9.51□□□□□ -0.89
EPHA4-209ENST00000443796 EPHA4P54764 986 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 PTSQ03393 145 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 C4orf17Q53FE4 359 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 SCG3Q8WXD2 468 aaKnown RBP9.5□□□□□ -0.89
EPHA4-209ENST00000443796 AIDAQ96BJ3 306 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 TIMMDC1Q9NPL8 285 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 RTCBQ9Y3I0 505 aaKnown RBP9.5□□□□□ -0.89
EPHA4-209ENST00000443796 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 TIAM2Q8IVF5 1701 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
EPHA4-209ENST00000443796 PPP1R12BO60237 982 aaPredicted RBP9.49□□□□□ -0.89
EPHA4-209ENST00000443796 LMNB1P20700 586 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 PLA2G4AP47712 749 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 DDR1Q08345 913 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 RRS1Q15050 365 aaKnown RBP9.49□□□□□ -0.89
EPHA4-209ENST00000443796 COG3Q96JB2 828 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 ATG3Q9NT62 314 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 ZNF232Q9UNY5 417 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 IQSEC3Q9UPP2 1182 aaPredicted RBP9.49□□□□□ -0.89
EPHA4-209ENST00000443796 CHMP3Q9Y3E7 222 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 VIRMAQ69YN4 1812 aaKnown RBP9.49□□□□□ -0.89
EPHA4-209ENST00000443796 KDRP35968 1356 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 CCDC88AQ3V6T2 1871 aa9.49□□□□□ -0.89
EPHA4-209ENST00000443796 CCDC85CA6NKD9 419 aa9.48□□□□□ -0.89
EPHA4-209ENST00000443796 HSPA8P11142 646 aaKnown RBP9.48□□□□□ -0.89
EPHA4-209ENST00000443796 VEGFBP49765 207 aa9.48□□□□□ -0.89
EPHA4-209ENST00000443796 FOXK2Q01167 660 aa9.48□□□□□ -0.89
EPHA4-209ENST00000443796 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
EPHA4-209ENST00000443796 GAS2L1Q99501 681 aaPredicted RBP9.48□□□□□ -0.89
EPHA4-209ENST00000443796 TERF2IPQ9NYB0 399 aa9.48□□□□□ -0.89
EPHA4-209ENST00000443796 TMOD3Q9NYL9 352 aa9.48□□□□□ -0.89
EPHA4-209ENST00000443796 MYH14Q7Z406 1995 aaKnown RBP9.48□□□□□ -0.89
EPHA4-209ENST00000443796 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
EPHA4-209ENST00000443796 PRMT3O60678 531 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms