RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 SPDYE2Q495Y8 402 aa25.32■■□□□ 1.64
UBE2D4-205ENST00000443780 SUGT1Q9Y2Z0 365 aa25.32■■□□□ 1.64
UBE2D4-205ENST00000443780 CASP8AP2Q9UKL3 1982 aa25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 PNMA6EA0A0J9YXQ4 647 aa25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 KIF23Q02241 960 aaPredicted RBP25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 RASAL3Q86YV0 1011 aa25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 WDR66Q8TBY9 1149 aa25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 TDRD3Q9H7E2 651 aaKnown RBP25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 GNL3LQ9NVN8 582 aaKnown RBP25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 ZNF70Q9UC06 446 aaPredicted RBP25.31■■□□□ 1.64
UBE2D4-205ENST00000443780 CA12O43570 354 aa25.3■■□□□ 1.64
UBE2D4-205ENST00000443780 ARMC9Q7Z3E5 817 aa25.3■■□□□ 1.64
UBE2D4-205ENST00000443780 TEKT1Q969V4 418 aa25.3■■□□□ 1.64
UBE2D4-205ENST00000443780 MRIQ9BWK5 157 aa25.3■■□□□ 1.64
UBE2D4-205ENST00000443780 ADORA1P30542 326 aa25.29■■□□□ 1.64
UBE2D4-205ENST00000443780 PHKA1P46020 1223 aa25.29■■□□□ 1.64
UBE2D4-205ENST00000443780 TIMM10P62072 90 aa25.29■■□□□ 1.64
UBE2D4-205ENST00000443780 TFCP2Q12800 502 aa25.29■■□□□ 1.64
UBE2D4-205ENST00000443780 PRKG1Q13976 671 aa25.29■■□□□ 1.64
UBE2D4-205ENST00000443780 ITPRIPQ8IWB1 547 aa25.29■■□□□ 1.64
UBE2D4-205ENST00000443780 RASA3Q14644 834 aa25.28■■□□□ 1.64
UBE2D4-205ENST00000443780 TSKSQ9UJT2 592 aa25.28■■□□□ 1.64
UBE2D4-205ENST00000443780 AKAP2Q9Y2D5 859 aa25.28■■□□□ 1.64
UBE2D4-205ENST00000443780 MAST3O60307 1309 aa25.28■■□□□ 1.64
UBE2D4-205ENST00000443780 SSC5DA1L4H1 1573 aa25.27■■□□□ 1.64
UBE2D4-205ENST00000443780 ZBTB7BO15156 539 aaPredicted RBP25.27■■□□□ 1.64
UBE2D4-205ENST00000443780 TNFAIP1Q13829 316 aa25.27■■□□□ 1.64
UBE2D4-205ENST00000443780 SUPT20HL1Q3ZLR7 823 aa25.27■■□□□ 1.64
UBE2D4-205ENST00000443780 ANGEL1Q9UNK9 670 aaKnown RBP25.27■■□□□ 1.64
UBE2D4-205ENST00000443780 MYH2Q9UKX2 1941 aa25.27■■□□□ 1.64
UBE2D4-205ENST00000443780 A0A1B0GUL7 405 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 SEMA3EO15041 775 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 ZBTB22O15209 634 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 G3BP1Q13283 466 aaKnown RBP eCLIP25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 LDLRAD1Q5T700 205 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 NBPF12Q5TAG4 269 aaPredicted RBP25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 CCDC102BQ68D86 513 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 ZDHHC15Q96MV8 337 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 CSRNP1Q96S65 589 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 DENND2AQ9ULE3 1009 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 FZD1Q9UP38 647 aa25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.26■■□□□ 1.63
UBE2D4-205ENST00000443780 ATP8B2P98198 1209 aa25.25■■□□□ 1.63
UBE2D4-205ENST00000443780 POLA2Q14181 598 aa25.25■■□□□ 1.63
UBE2D4-205ENST00000443780 HHIPL2Q6UWX4 724 aa25.25■■□□□ 1.63
UBE2D4-205ENST00000443780 C1orf115Q9H7X2 142 aa25.25■■□□□ 1.63
UBE2D4-205ENST00000443780 PPP1R12BO60237 982 aaPredicted RBP25.24■■□□□ 1.63
UBE2D4-205ENST00000443780 MAP3K11Q16584 847 aa25.24■■□□□ 1.63
UBE2D4-205ENST00000443780 REM2Q8IYK8 340 aaPredicted RBP25.24■■□□□ 1.63
UBE2D4-205ENST00000443780 PANK1Q8TE04 598 aa25.24■■□□□ 1.63
UBE2D4-205ENST00000443780 SSH3Q8TE77 659 aa25.24■■□□□ 1.63
UBE2D4-205ENST00000443780 XAGE2Q96GT9 111 aa25.24■■□□□ 1.63
UBE2D4-205ENST00000443780 SALL1Q9NSC2 1324 aa25.23■■□□□ 1.63
UBE2D4-205ENST00000443780 TCP10L2B9ZVM9 353 aa25.23■■□□□ 1.63
UBE2D4-205ENST00000443780 TNNI2P48788 182 aa25.23■■□□□ 1.63
UBE2D4-205ENST00000443780 APOBEC3HQ6NTF7 200 aaKnown RBP25.23■■□□□ 1.63
UBE2D4-205ENST00000443780 AK9Q5TCS8 1911 aa25.23■■□□□ 1.63
UBE2D4-205ENST00000443780 OTOFQ9HC10 1997 aa25.22■■□□□ 1.63
UBE2D4-205ENST00000443780 PRDX5P30044 214 aa25.22■■□□□ 1.63
UBE2D4-205ENST00000443780 MVPQ14764 893 aaKnown RBP25.22■■□□□ 1.63
UBE2D4-205ENST00000443780 TEPSINQ96N21 525 aa25.22■■□□□ 1.63
UBE2D4-205ENST00000443780 NEUROD6Q96NK8 337 aa25.22■■□□□ 1.63
UBE2D4-205ENST00000443780 LDHBP07195 334 aaKnown RBP25.21■■□□□ 1.63
UBE2D4-205ENST00000443780 RASGRF1Q13972 1273 aa25.21■■□□□ 1.63
UBE2D4-205ENST00000443780 RNF186Q9NXI6 227 aa25.21■■□□□ 1.63
UBE2D4-205ENST00000443780 SAGE1Q9NXZ1 904 aa25.21■■□□□ 1.63
UBE2D4-205ENST00000443780 USP2O75604 605 aaPredicted RBP25.2■■□□□ 1.62
UBE2D4-205ENST00000443780 MS4A1P11836 297 aa25.2■■□□□ 1.62
UBE2D4-205ENST00000443780 CACNB3P54284 484 aa25.2■■□□□ 1.62
UBE2D4-205ENST00000443780 TMEM39BQ9GZU3 492 aa25.2■■□□□ 1.62
UBE2D4-205ENST00000443780 TMOD2Q9NZR1 351 aa25.2■■□□□ 1.62
UBE2D4-205ENST00000443780 PDS5AQ29RF7 1337 aaKnown RBP25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 LAMB1P07942 1786 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 UNCXA6NJT0 531 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 TRPA1O75762 1119 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 IREB2P48200 963 aaKnown RBP25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 DIXDC1Q155Q3 683 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 FKBP1CQ5VVH2 108 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 CDAN1Q8IWY9 1227 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 SLC10A4Q96EP9 437 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 DAGLAQ9Y4D2 1042 aa25.19■■□□□ 1.62
UBE2D4-205ENST00000443780 MKRN3Q13064 507 aaKnown RBP25.18■■□□□ 1.62
UBE2D4-205ENST00000443780 ZGPATQ8N5A5 531 aaKnown RBP25.18■■□□□ 1.62
UBE2D4-205ENST00000443780 CLMNQ96JQ2 1002 aa25.18■■□□□ 1.62
UBE2D4-205ENST00000443780 RCAN3Q9UKA8 241 aa25.18■■□□□ 1.62
UBE2D4-205ENST00000443780 SURF6O75683 361 aaKnown RBP25.17■■□□□ 1.62
UBE2D4-205ENST00000443780 OS9Q13438 667 aaPredicted RBP25.17■■□□□ 1.62
UBE2D4-205ENST00000443780 GORABQ5T7V8 394 aa25.17■■□□□ 1.62
UBE2D4-205ENST00000443780 SPRYD7Q5W111 196 aa25.17■■□□□ 1.62
UBE2D4-205ENST00000443780 FAM83AQ86UY5 434 aa25.17■■□□□ 1.62
UBE2D4-205ENST00000443780 GPR108Q9NPR9 543 aa25.16■■□□□ 1.62
UBE2D4-205ENST00000443780 NOP58Q9Y2X3 529 aaKnown RBP25.16■■□□□ 1.62
UBE2D4-205ENST00000443780 TM4SF4P48230 202 aa25.15■■□□□ 1.62
UBE2D4-205ENST00000443780 CEP85Q6P2H3 762 aa25.15■■□□□ 1.62
UBE2D4-205ENST00000443780 ANKRD13AQ8IZ07 590 aa25.15■■□□□ 1.62
UBE2D4-205ENST00000443780 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.15■■□□□ 1.62
UBE2D4-205ENST00000443780 ABCF2Q9UG63 623 aa25.15■■□□□ 1.62
UBE2D4-205ENST00000443780 SPTY2D1Q68D10 685 aaPredicted RBP25.14■■□□□ 1.62
UBE2D4-205ENST00000443780 CDC42EP5Q6NZY7 148 aa25.14■■□□□ 1.62
UBE2D4-205ENST00000443780 HMG20BQ9P0W2 317 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms