RNA–Protein interactions for RNA: ENST00000443740.5

CARF-215, Transcript of calcium responsive transcription factor, human

TSL 3

Gene CARF, Length 597 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARF-215	ENST00000443740	ATP10B	O94823	1461 aa		4.91	□□□□□ -1.62
CARF-215	ENST00000443740	ADGB	Q8N7X0	1667 aa		4.91	□□□□□ -1.62
CARF-215	ENST00000443740	ITSN2	Q9NZM3	1697 aa		4.91	□□□□□ -1.62
CARF-215	ENST00000443740	ZMYM3	Q14202	1370 aa		4.91	□□□□□ -1.62
CARF-215	ENST00000443740	NINL	Q9Y2I6	1382 aa		4.91	□□□□□ -1.62
CARF-215	ENST00000443740	SCAPER	Q9BY12	1400 aa		4.9	□□□□□ -1.62
CARF-215	ENST00000443740	CLTC	Q00610	1675 aa	Known RBP	4.9	□□□□□ -1.62
CARF-215	ENST00000443740	DLL1	O00548	723 aa		4.9	□□□□□ -1.63
CARF-215	ENST00000443740	KIF4A	O95239	1232 aa		4.9	□□□□□ -1.63
CARF-215	ENST00000443740	CYP2E1	P05181	493 aa	Predicted RBP	4.9	□□□□□ -1.63
CARF-215	ENST00000443740	SETDB1	Q15047	1291 aa		4.9	□□□□□ -1.63
CARF-215	ENST00000443740	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.9	□□□□□ -1.63
CARF-215	ENST00000443740	PDE12	Q6L8Q7	609 aa	Known RBP	4.9	□□□□□ -1.63
CARF-215	ENST00000443740	IL22RA1	Q8N6P7	574 aa		4.9	□□□□□ -1.63
CARF-215	ENST00000443740	NUDT16	Q96DE0	195 aa	Known RBP	4.9	□□□□□ -1.63
CARF-215	ENST00000443740	RTEL1-TNFRSF6B	F6WH68	1400 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	ATP11A	P98196	1134 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	HYAL2	Q12891	473 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	NOM1	Q5C9Z4	860 aa	Known RBP	4.89	□□□□□ -1.63
CARF-215	ENST00000443740	XKR5	Q6UX68	686 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	CACTIN-AS1	Q8N1I8	211 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.89	□□□□□ -1.63
CARF-215	ENST00000443740	WFDC12	Q8WWY7	111 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	ELP3	Q9H9T3	547 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	TMEM63C	Q9P1W3	806 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.89	□□□□□ -1.63
CARF-215	ENST00000443740	ABCA6	Q8N139	1617 aa		4.89	□□□□□ -1.63
CARF-215	ENST00000443740	SCAF11	Q99590	1463 aa	Known RBP	4.88	□□□□□ -1.63
CARF-215	ENST00000443740	CEP350	Q5VT06	3117 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	ABCC1	P33527	1531 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	UNC13B	O14795	1591 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	RPLP1	P05386	114 aa	Known RBP	4.88	□□□□□ -1.63
CARF-215	ENST00000443740	HSPA6	P17066	643 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	MPST	P25325	297 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	NOS3	P29474	1203 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	EIF1AX	P47813	144 aa	Known RBP	4.88	□□□□□ -1.63
CARF-215	ENST00000443740	IREB2	P48200	963 aa	Known RBP	4.88	□□□□□ -1.63
CARF-215	ENST00000443740	PHLDB3	Q6NSJ2	640 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	ZNF438	Q7Z4V0	828 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	C14orf37	Q86TY3	774 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	MAP4K3	Q8IVH8	894 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	EDEM1	Q92611	657 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	TP53INP1	Q96A56	240 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	SPACA7	Q96KW9	195 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	MUC3B	Q9H195	1237 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	RASSF4	Q9H2L5	321 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	GGNBP2	Q9H3C7	697 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	SRA1	Q9HD15	236 aa	Known RBP	4.88	□□□□□ -1.63
CARF-215	ENST00000443740	CNTN3	Q9P232	1028 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	ZNF518A	Q6AHZ1	1483 aa		4.88	□□□□□ -1.63
CARF-215	ENST00000443740	ZC3H13	Q5T200	1668 aa	Known RBP	4.87	□□□□□ -1.63
CARF-215	ENST00000443740	CARNS1	A5YM72	827 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	SMNDC1	O75940	238 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
CARF-215	ENST00000443740	PDGFA	P04085	211 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	NPR3	P17342	541 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	MZF1	P28698	734 aa	Predicted RBP	4.87	□□□□□ -1.63
CARF-215	ENST00000443740	DNM1	Q05193	864 aa	Known RBP	4.87	□□□□□ -1.63
CARF-215	ENST00000443740	MTMR3	Q13615	1198 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	CEP135	Q66GS9	1140 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	ADAMTSL4	Q6UY14	1074 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	TMEM130	Q8N3G9	435 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	CEP120	Q8N960	986 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	MEGF10	Q96KG7	1140 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	PPME1	Q9Y570	386 aa		4.87	□□□□□ -1.63
CARF-215	ENST00000443740	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	4.87	□□□□□ -1.63
CARF-215	ENST00000443740		A6NHS1	94 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	TM4SF5	O14894	197 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	PCSK2	P16519	638 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	R3HDM1	Q15032	1099 aa	Known RBP	4.86	□□□□□ -1.63
CARF-215	ENST00000443740	C8orf34	Q49A92	452 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	ALKBH2	Q6NS38	261 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	NCAPG2	Q86XI2	1143 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	DZIP1L	Q8IYY4	767 aa	Known RBP	4.86	□□□□□ -1.63
CARF-215	ENST00000443740	GALNT11	Q8NCW6	608 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	DCAF11	Q8TEB1	546 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	C8orf37	Q96NL8	207 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	LACRT	Q9GZZ8	138 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	MRPL18	Q9H0U6	180 aa	Known RBP	4.86	□□□□□ -1.63
CARF-215	ENST00000443740	AKTIP	Q9H8T0	292 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	KANSL3	Q9P2N6	904 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	SALL4	Q9UJQ4	1053 aa		4.86	□□□□□ -1.63
CARF-215	ENST00000443740	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.86	□□□□□ -1.63
CARF-215	ENST00000443740		F8W735	103 aa	Predicted RBP	4.85	□□□□□ -1.63
CARF-215	ENST00000443740	LINC01387	J3KSC0	135 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	ALX3	O95076	343 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	CDC27	P30260	824 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	MCTP1	Q6DN14	999 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	FAM9A	Q8IZU1	332 aa	Predicted RBP	4.85	□□□□□ -1.63
CARF-215	ENST00000443740	C1orf127	Q8N9H9	656 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	POP1	Q99575	1024 aa	Known RBP	4.85	□□□□□ -1.63
CARF-215	ENST00000443740	PBX4	Q9BYU1	374 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	ADAM19	Q9H013	955 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	CHRD	Q9H2X0	955 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	POLI	Q9UNA4	740 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	GOLGA3	Q08378	1498 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	ATP7A	Q04656	1500 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	FAM135A	Q9P2D6	1515 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	SPHKAP	Q2M3C7	1700 aa		4.85	□□□□□ -1.63
CARF-215	ENST00000443740	TIAM1	Q13009	1591 aa		4.84	□□□□□ -1.63
CARF-215	ENST00000443740	DIP2A	Q14689	1571 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms