RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PSMA7O14818 248 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 SSR1P43307 286 aaKnown RBP25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 TAF3Q5VWG9 929 aa25.57■■□□□ 1.68
CTDSPL-206ENST00000443503 AKR1B10O60218 316 aa25.56■■□□□ 1.68
CTDSPL-206ENST00000443503 MCM7P33993 719 aa25.56■■□□□ 1.68
CTDSPL-206ENST00000443503 MYL10Q9BUA6 226 aa25.56■■□□□ 1.68
CTDSPL-206ENST00000443503 CTAGE1Q96RT6 745 aa25.56■■□□□ 1.68
CTDSPL-206ENST00000443503 ANO1Q5XXA6 986 aa25.55■■□□□ 1.68
CTDSPL-206ENST00000443503 CCDC87Q9NVE4 849 aa25.55■■□□□ 1.68
CTDSPL-206ENST00000443503 CDCA7Q9BWT1 371 aaPredicted RBP25.55■■□□□ 1.68
CTDSPL-206ENST00000443503 CHD1O14646 1710 aa25.55■■□□□ 1.68
CTDSPL-206ENST00000443503 PPP4R3BQ5MIZ7 849 aa25.54■■□□□ 1.68
CTDSPL-206ENST00000443503 C6orf50Q9HD87 102 aa25.54■■□□□ 1.68
CTDSPL-206ENST00000443503 CCDC24Q8N4L8 307 aa25.54■■□□□ 1.68
CTDSPL-206ENST00000443503 BCORL1Q5H9F3 1711 aa25.54■■□□□ 1.68
CTDSPL-206ENST00000443503 CHAMP1Q96JM3 812 aa25.54■■□□□ 1.68
CTDSPL-206ENST00000443503 STAP2Q9UGK3 403 aa25.54■■□□□ 1.68
CTDSPL-206ENST00000443503 ZNF532Q9HCE3 1301 aa25.54■■□□□ 1.68
CTDSPL-206ENST00000443503 E7EWF7 191 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 POLR3GO15318 223 aaPredicted RBP25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 PLCG2P16885 1265 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 EHMT1Q9H9B1 1298 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 RIMBP2O15034 1052 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 HIBADHP31937 336 aaKnown RBP25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 PRAMEF22A3QJZ6 481 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 MAP9Q49MG5 647 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 TAX1BP1Q86VP1 789 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 PHKBQ93100 1093 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 LRRC27Q9C0I9 530 aa25.53■■□□□ 1.68
CTDSPL-206ENST00000443503 NEFHP12036 1026 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 RILPL1Q5EBL4 403 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 DIS3L2Q8IYB7 885 aaKnown RBP25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 LMTK3Q96Q04 1460 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 NLRP1Q9C000 1473 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 CD2BP2O95400 341 aaKnown RBP25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 TNNI2P48788 182 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 SAMM50Q9Y512 469 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 ABCC3O15438 1527 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 OSBPL3Q9H4L5 887 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 SSH2Q76I76 1423 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 MYO1BO43795 1136 aa25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.52■■□□□ 1.68
CTDSPL-206ENST00000443503 HECW2Q9P2P5 1572 aa25.51■■□□□ 1.68
CTDSPL-206ENST00000443503 ELP1O95163 1332 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 SPDYE4A6NLX3 237 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 RASEFQ8IZ41 740 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 DSCC1Q9BVC3 393 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 RRAGDQ9NQL2 400 aaPredicted RBP25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 VWA3AA6NCI4 1184 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 ZNF174Q15697 407 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 WDR78Q5VTH9 848 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 IQUBQ8NA54 791 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 LRRC24Q50LG9 513 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 PLIN2Q99541 437 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 CLSTN2Q9H4D0 955 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 CCNL1Q9UK58 526 aaPredicted RBP25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 V9GY48 417 aaPredicted RBP25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 TFCP2L1Q9NZI6 479 aa25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 V9GYY5 206 aaPredicted RBP25.51■■□□□ 1.67
CTDSPL-206ENST00000443503 TET3O43151 1660 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 DEXIO95424 95 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 TRAPPC3LQ5T215 181 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 CNBD1Q8NA66 436 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 JADE2Q9NQC1 790 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 MYL5Q02045 173 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 SPATA5Q8NB90 893 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 RNF216Q9NWF9 866 aaPredicted RBP25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 IQGAP3Q86VI3 1631 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 USP8P40818 1118 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 CTDSPL2Q05D32 466 aa25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 RRP36Q96EU6 259 aaKnown RBP25.5■■□□□ 1.67
CTDSPL-206ENST00000443503 TBCAO75347 108 aaKnown RBP25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 DTHD1Q6ZMT9 781 aa25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 ALS2CR12Q96Q35 445 aa25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 COPRSQ9NQ92 184 aa25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 NOP2P46087 812 aaKnown RBP25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 TPCN1Q9ULQ1 816 aa25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 LIG1P18858 919 aa25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 ERMNQ8TAM6 284 aa25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 GTF3C6Q969F1 213 aa25.49■■□□□ 1.67
CTDSPL-206ENST00000443503 TMEM94Q12767 1356 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 CETN1Q12798 172 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 TEX11Q8IYF3 940 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 SYCP3Q8IZU3 236 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 ZSWIM6Q9HCJ5 1215 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 TMCO5BA8MYB1 307 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 KIAA0754O94854 1291 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 GNA11P29992 359 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 SPAG5Q96R06 1193 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 KCNH3Q9ULD8 1083 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 KRT40Q6A162 431 aa25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 RBM28Q9NW13 759 aaKnown RBP25.48■■□□□ 1.67
CTDSPL-206ENST00000443503 FAM98CQ17RN3 349 aaKnown RBP25.47■■□□□ 1.67
CTDSPL-206ENST00000443503 SAP30BPQ9UHR5 308 aaKnown RBP25.47■■□□□ 1.67
CTDSPL-206ENST00000443503 DBNLQ9UJU6 430 aaKnown RBP25.47■■□□□ 1.67
CTDSPL-206ENST00000443503 ADCY10Q96PN6 1610 aa25.47■■□□□ 1.67
CTDSPL-206ENST00000443503 KRT79Q5XKE5 535 aa25.47■■□□□ 1.67
CTDSPL-206ENST00000443503 OGFOD1Q8N543 542 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms