RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 PTPN12Q05209 780 aaKnown RBP9.05□□□□□ -0.96
RFX3-206ENST00000442560 ARMC9Q7Z3E5 817 aa9.05□□□□□ -0.96
RFX3-206ENST00000442560 APOBEC3FQ8IUX4 373 aaKnown RBP9.05□□□□□ -0.96
RFX3-206ENST00000442560 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
RFX3-206ENST00000442560 ZSWIM6Q9HCJ5 1215 aa9.05□□□□□ -0.96
RFX3-206ENST00000442560 MRS2Q9HD23 443 aa9.05□□□□□ -0.96
RFX3-206ENST00000442560 FZD1Q9UP38 647 aa9.05□□□□□ -0.96
RFX3-206ENST00000442560 F8W031 263 aaPredicted RBP9.04□□□□□ -0.96
RFX3-206ENST00000442560 PLIN1O60240 522 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 TM4SF4P48230 202 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 MMP14P50281 582 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 IFIT5Q13325 482 aaKnown RBP9.04□□□□□ -0.96
RFX3-206ENST00000442560 DLGAP5Q15398 846 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 LMBR1LQ6UX01 489 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 WDR63Q8IWG1 891 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 CERS5Q8N5B7 392 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 ZNF296Q8WUU4 475 aaPredicted RBP9.04□□□□□ -0.96
RFX3-206ENST00000442560 ZBED3Q96IU2 234 aaPredicted RBP9.04□□□□□ -0.96
RFX3-206ENST00000442560 ZNF594Q96JF6 807 aaPredicted RBP9.04□□□□□ -0.96
RFX3-206ENST00000442560 ANGEL1Q9UNK9 670 aaKnown RBP9.04□□□□□ -0.96
RFX3-206ENST00000442560 JAG2Q9Y219 1238 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 PCDHAC2Q9Y5I4 1007 aa9.04□□□□□ -0.96
RFX3-206ENST00000442560 GPR25O00155 361 aa9.03□□□□□ -0.96
RFX3-206ENST00000442560 TAF7LQ5H9L4 462 aa9.03□□□□□ -0.96
RFX3-206ENST00000442560 EPHA10Q5JZY3 1008 aa9.03□□□□□ -0.96
RFX3-206ENST00000442560 DEFB129Q9H1M3 183 aa9.03□□□□□ -0.96
RFX3-206ENST00000442560 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
RFX3-206ENST00000442560 IRS2Q9Y4H2 1338 aa9.03□□□□□ -0.96
RFX3-206ENST00000442560 PAPPA2Q9BXP8 1791 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 CLRN2A0PK11 232 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 ANP32CO43423 234 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 SLC34A2O95436 690 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 SREBF2Q12772 1141 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 CCDC57Q2TAC2 916 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 CFAP100Q494V2 611 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 LDLRAD1Q5T700 205 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 LDHAL6AQ6ZMR3 332 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 C15orf52Q6ZUT6 534 aaKnown RBP9.02□□□□□ -0.97
RFX3-206ENST00000442560 ZNF804AQ7Z570 1209 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 RNF25Q96BH1 459 aaPredicted RBP9.02□□□□□ -0.97
RFX3-206ENST00000442560 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 R3HDMLQ9H3Y0 253 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 CASP8AP2Q9UKL3 1982 aa9.02□□□□□ -0.97
RFX3-206ENST00000442560 ZNF316A6NFI3 1004 aaPredicted RBP9.01□□□□□ -0.97
RFX3-206ENST00000442560 IL1R1P14778 569 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 RBM5P52756 815 aaKnown RBP eCLIP9.01□□□□□ -0.97
RFX3-206ENST00000442560 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 SLC4A10Q6U841 1118 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 MTMR14Q8NCE2 650 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 CLMNQ96JQ2 1002 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 PRMT6Q96LA8 375 aaPredicted RBP9.01□□□□□ -0.97
RFX3-206ENST00000442560 VEZTQ9HBM0 779 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 CNNM1Q9NRU3 951 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 C9orf78Q9NZ63 289 aaPredicted RBP9.01□□□□□ -0.97
RFX3-206ENST00000442560 AOX1Q06278 1338 aa9.01□□□□□ -0.97
RFX3-206ENST00000442560 GRM8O00222 908 aa9□□□□□ -0.97
RFX3-206ENST00000442560 MYO1BO43795 1136 aa9□□□□□ -0.97
RFX3-206ENST00000442560 FKTNO75072 461 aa9□□□□□ -0.97
RFX3-206ENST00000442560 FKBP1AP62942 108 aaKnown RBP9□□□□□ -0.97
RFX3-206ENST00000442560 LSM11P83369 360 aaKnown RBP eCLIP9□□□□□ -0.97
RFX3-206ENST00000442560 PKN2Q16513 984 aaKnown RBP9□□□□□ -0.97
RFX3-206ENST00000442560 MAP3K11Q16584 847 aa9□□□□□ -0.97
RFX3-206ENST00000442560 NBPF12Q5TAG4 269 aaPredicted RBP9□□□□□ -0.97
RFX3-206ENST00000442560 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
RFX3-206ENST00000442560 PUS3Q9BZE2 481 aaKnown RBP9□□□□□ -0.97
RFX3-206ENST00000442560 PPP2R3BQ9Y5P8 575 aa9□□□□□ -0.97
RFX3-206ENST00000442560 POLR2AP24928 1970 aaKnown RBP8.99□□□□□ -0.97
RFX3-206ENST00000442560 MANSC4A6NHS7 340 aaPredicted RBP8.99□□□□□ -0.97
RFX3-206ENST00000442560 PPP1R12BO60237 982 aaPredicted RBP8.99□□□□□ -0.97
RFX3-206ENST00000442560 USP2O75604 605 aaPredicted RBP8.99□□□□□ -0.97
RFX3-206ENST00000442560 ALDH1L1O75891 902 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 NUDT7P0C024 238 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 GYG1P46976 350 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 RASA3Q14644 834 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 SUPT20HL1Q3ZLR7 823 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 NOM1Q5C9Z4 860 aaKnown RBP8.99□□□□□ -0.97
RFX3-206ENST00000442560 FBXO46Q6PJ61 603 aaPredicted RBP8.99□□□□□ -0.97
RFX3-206ENST00000442560 SUCLG2Q96I99 432 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 WNK4Q96J92 1243 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 CFHR5Q9BXR6 569 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 SRCIN1Q9C0H9 1055 aa8.99□□□□□ -0.97
RFX3-206ENST00000442560 COL1A1P02452 1464 aaPredicted RBP8.98□□□□□ -0.97
RFX3-206ENST00000442560 RIOK3O14730 519 aaKnown RBP8.98□□□□□ -0.97
RFX3-206ENST00000442560 ALDH1A1P00352 501 aa8.98□□□□□ -0.97
RFX3-206ENST00000442560 HIBADHP31937 336 aaKnown RBP8.98□□□□□ -0.97
RFX3-206ENST00000442560 INHBEP58166 350 aa8.98□□□□□ -0.97
RFX3-206ENST00000442560 UBE4AQ14139 1066 aa8.98□□□□□ -0.97
RFX3-206ENST00000442560 TDRD7Q8NHU6 1098 aaKnown RBP8.98□□□□□ -0.97
RFX3-206ENST00000442560 KAZALD1Q96I82 304 aa8.98□□□□□ -0.97
RFX3-206ENST00000442560 FAM84BQ96KN1 310 aaPredicted RBP8.98□□□□□ -0.97
RFX3-206ENST00000442560 TDRD3Q9H7E2 651 aaKnown RBP8.98□□□□□ -0.97
RFX3-206ENST00000442560 TTF2Q9UNY4 1162 aaKnown RBP8.98□□□□□ -0.97
RFX3-206ENST00000442560 FAM205AQ6ZU69 1335 aa8.98□□□□□ -0.97
RFX3-206ENST00000442560 SSC5DA1L4H1 1573 aa8.98□□□□□ -0.97
RFX3-206ENST00000442560 PSME4Q14997 1843 aa8.97□□□□□ -0.97
RFX3-206ENST00000442560 IGF2BP3O00425 579 aaKnown RBP eCLIP8.97□□□□□ -0.97
RFX3-206ENST00000442560 NBPF7P0C2Y1 421 aaPredicted RBP8.97□□□□□ -0.97
RFX3-206ENST00000442560 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
RFX3-206ENST00000442560 GJA5P36382 358 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms