RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 FBXO33Q7Z6M2 555 aa14.71□□□□□ -0.05
TTC28-203ENST00000442232 DZIP1LQ8IYY4 767 aaKnown RBP14.71□□□□□ -0.05
TTC28-203ENST00000442232 KLHDC4Q8TBB5 520 aa14.71□□□□□ -0.05
TTC28-203ENST00000442232 TEKT1Q969V4 418 aa14.71□□□□□ -0.05
TTC28-203ENST00000442232 TDRD3Q9H7E2 651 aaKnown RBP14.71□□□□□ -0.05
TTC28-203ENST00000442232 FZD1Q9UP38 647 aa14.71□□□□□ -0.05
TTC28-203ENST00000442232 EYA2O00167 538 aa14.7□□□□□ -0.06
TTC28-203ENST00000442232 PKN2Q16513 984 aaKnown RBP14.7□□□□□ -0.06
TTC28-203ENST00000442232 NBPF12Q5TAG4 269 aaPredicted RBP14.7□□□□□ -0.06
TTC28-203ENST00000442232 ANKRD13AQ8IZ07 590 aa14.7□□□□□ -0.06
TTC28-203ENST00000442232 VGLL2Q8N8G2 317 aa14.7□□□□□ -0.06
TTC28-203ENST00000442232 ZNF296Q8WUU4 475 aaPredicted RBP14.7□□□□□ -0.06
TTC28-203ENST00000442232 WNK4Q96J92 1243 aa14.7□□□□□ -0.06
TTC28-203ENST00000442232 TCP10L2B9ZVM9 353 aa14.69□□□□□ -0.06
TTC28-203ENST00000442232 BCAMP50895 628 aa14.69□□□□□ -0.06
TTC28-203ENST00000442232 HDLBPQ00341 1268 aaKnown RBP14.69□□□□□ -0.06
TTC28-203ENST00000442232 NOM1Q5C9Z4 860 aaKnown RBP14.69□□□□□ -0.06
TTC28-203ENST00000442232 OTUD7BQ6GQQ9 843 aa14.69□□□□□ -0.06
TTC28-203ENST00000442232 LPIN2Q92539 896 aa14.69□□□□□ -0.06
TTC28-203ENST00000442232 NOB1Q9ULX3 412 aaKnown RBP14.69□□□□□ -0.06
TTC28-203ENST00000442232 GPR25O00155 361 aa14.68□□□□□ -0.06
TTC28-203ENST00000442232 FKTNO75072 461 aa14.68□□□□□ -0.06
TTC28-203ENST00000442232 TRMT2AQ8IZ69 625 aaKnown RBP14.68□□□□□ -0.06
TTC28-203ENST00000442232 HOOK2Q96ED9 719 aa14.68□□□□□ -0.06
TTC28-203ENST00000442232 CLMNQ96JQ2 1002 aa14.68□□□□□ -0.06
TTC28-203ENST00000442232 SIL1Q9H173 461 aa14.68□□□□□ -0.06
TTC28-203ENST00000442232 GNL3LQ9NVN8 582 aaKnown RBP14.68□□□□□ -0.06
TTC28-203ENST00000442232 FBXO3Q9UK99 471 aa14.68□□□□□ -0.06
TTC28-203ENST00000442232 SUGT1Q9Y2Z0 365 aa14.68□□□□□ -0.06
TTC28-203ENST00000442232 AOX1Q06278 1338 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 AK9Q5TCS8 1911 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 RGS19P49795 217 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 ATP2B3Q16720 1220 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 IFNL1Q8IU54 200 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 WDR66Q8TBY9 1149 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 CFHR5Q9BXR6 569 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 CEP126Q9P2H0 1117 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 CSADQ9Y600 493 aa14.67□□□□□ -0.06
TTC28-203ENST00000442232 USP2O75604 605 aaPredicted RBP14.66□□□□□ -0.06
TTC28-203ENST00000442232 CIAO1O76071 339 aa14.66□□□□□ -0.06
TTC28-203ENST00000442232 FGFR2P21802 821 aa14.66□□□□□ -0.06
TTC28-203ENST00000442232 RFX5P48382 616 aaPredicted RBP14.66□□□□□ -0.06
TTC28-203ENST00000442232 TMEM39BQ9GZU3 492 aa14.66□□□□□ -0.06
TTC28-203ENST00000442232 ELP3Q9H9T3 547 aa14.66□□□□□ -0.06
TTC28-203ENST00000442232 SOX10P56693 466 aa14.65□□□□□ -0.06
TTC28-203ENST00000442232 GRIK5Q16478 980 aa14.65□□□□□ -0.06
TTC28-203ENST00000442232 OPTNQ96CV9 577 aa14.65□□□□□ -0.06
TTC28-203ENST00000442232 ZDHHC15Q96MV8 337 aa14.65□□□□□ -0.06
TTC28-203ENST00000442232 MRIQ9BWK5 157 aa14.65□□□□□ -0.06
TTC28-203ENST00000442232 HPS5Q9UPZ3 1129 aa14.65□□□□□ -0.06
TTC28-203ENST00000442232 LRRFIP2Q9Y608 721 aaKnown RBP14.65□□□□□ -0.06
TTC28-203ENST00000442232 IPO8O15397 1037 aaKnown RBP14.64□□□□□ -0.07
TTC28-203ENST00000442232 GNAI3P08754 354 aa14.64□□□□□ -0.07
TTC28-203ENST00000442232 IL15P40933 162 aaPredicted RBP14.64□□□□□ -0.07
TTC28-203ENST00000442232 RARSP54136 660 aaKnown RBP14.64□□□□□ -0.07
TTC28-203ENST00000442232 ATG9AQ7Z3C6 839 aa14.64□□□□□ -0.07
TTC28-203ENST00000442232 WDHD1O75717 1129 aaPredicted RBP14.63□□□□□ -0.07
TTC28-203ENST00000442232 CACNB3P54284 484 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 MAP3K9P80192 1104 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 FKBP1CQ5VVH2 108 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 DCAF15Q66K64 600 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 FBXO46Q6PJ61 603 aaPredicted RBP14.63□□□□□ -0.07
TTC28-203ENST00000442232 HHIPL2Q6UWX4 724 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 FAM83AQ86UY5 434 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 ARHGAP45Q92619 1136 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 TEPSINQ96N21 525 aa14.63□□□□□ -0.07
TTC28-203ENST00000442232 RPAP1Q9BWH6 1393 aaPredicted RBP14.62□□□□□ -0.07
TTC28-203ENST00000442232 IGF2BP3O00425 579 aaKnown RBP eCLIP14.62□□□□□ -0.07
TTC28-203ENST00000442232 SEMA3EO15041 775 aa14.62□□□□□ -0.07
TTC28-203ENST00000442232 LDHBP07195 334 aaKnown RBP14.62□□□□□ -0.07
TTC28-203ENST00000442232 ZGPATQ8N5A5 531 aaKnown RBP14.62□□□□□ -0.07
TTC28-203ENST00000442232 ERO1AQ96HE7 468 aa14.62□□□□□ -0.07
TTC28-203ENST00000442232 MEIS3Q99687 375 aa14.62□□□□□ -0.07
TTC28-203ENST00000442232 DENND2AQ9ULE3 1009 aa14.62□□□□□ -0.07
TTC28-203ENST00000442232 MYH2Q9UKX2 1941 aa14.61□□□□□ -0.07
TTC28-203ENST00000442232 GJA5P36382 358 aa14.61□□□□□ -0.07
TTC28-203ENST00000442232 GTF2A2P52657 109 aa14.61□□□□□ -0.07
TTC28-203ENST00000442232 VGLL4Q14135 290 aa14.61□□□□□ -0.07
TTC28-203ENST00000442232 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
TTC28-203ENST00000442232 OTUD5Q96G74 571 aa14.61□□□□□ -0.07
TTC28-203ENST00000442232 WRNIP1Q96S55 665 aa14.61□□□□□ -0.07
TTC28-203ENST00000442232 PA2G4Q9UQ80 394 aaKnown RBP14.61□□□□□ -0.07
TTC28-203ENST00000442232 CCL15-CCL14A0A0B4J2E2 113 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 SRGAP3O43295 1099 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 CRHR2Q13324 411 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 CCL15Q16663 113 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 INTS3Q68E01 1043 aaKnown RBP14.6□□□□□ -0.07
TTC28-203ENST00000442232 APOBEC3HQ6NTF7 200 aaKnown RBP14.6□□□□□ -0.07
TTC28-203ENST00000442232 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.6□□□□□ -0.07
TTC28-203ENST00000442232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.6□□□□□ -0.07
TTC28-203ENST00000442232 FRAT1Q92837 279 aaPredicted RBP14.6□□□□□ -0.07
TTC28-203ENST00000442232 R3HDMLQ9H3Y0 253 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 COPRSQ9NQ92 184 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 AKAP2Q9Y2D5 859 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 TRIM17Q9Y577 477 aa14.6□□□□□ -0.07
TTC28-203ENST00000442232 DOCK2Q92608 1830 aa14.59□□□□□ -0.07
TTC28-203ENST00000442232 TESPA1A2RU30 521 aaPredicted RBP14.59□□□□□ -0.07
TTC28-203ENST00000442232 ARHGEF6Q15052 776 aa14.59□□□□□ -0.07
TTC28-203ENST00000442232 TAF1CQ15572 869 aaPredicted RBP14.59□□□□□ -0.07
TTC28-203ENST00000442232 SLF2Q8IX21 1173 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms