RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 FAM84BQ96KN1 310 aaPredicted RBP25.12■■□□□ 1.61
UBE2F-215ENST00000441728 AOX1Q06278 1338 aa25.12■■□□□ 1.61
UBE2F-215ENST00000441728 METTL24Q5JXM2 366 aa25.11■■□□□ 1.61
UBE2F-215ENST00000441728 TBC1D22AQ8WUA7 517 aa25.11■■□□□ 1.61
UBE2F-215ENST00000441728 PTPN22Q9Y2R2 807 aa25.11■■□□□ 1.61
UBE2F-215ENST00000441728 GJA5P36382 358 aa25.1■■□□□ 1.61
UBE2F-215ENST00000441728 FAM9BQ8IZU0 186 aa25.1■■□□□ 1.61
UBE2F-215ENST00000441728 PUS3Q9BZE2 481 aaKnown RBP25.1■■□□□ 1.61
UBE2F-215ENST00000441728 ZFYVE28Q9HCC9 887 aa25.1■■□□□ 1.61
UBE2F-215ENST00000441728 IQSEC3Q9UPP2 1182 aaPredicted RBP25.1■■□□□ 1.61
UBE2F-215ENST00000441728 GTF2A2P52657 109 aa25.09■■□□□ 1.61
UBE2F-215ENST00000441728 MAP3K9P80192 1104 aa25.09■■□□□ 1.61
UBE2F-215ENST00000441728 TAF1CQ15572 869 aaPredicted RBP25.09■■□□□ 1.61
UBE2F-215ENST00000441728 CCL15-CCL14A0A0B4J2E2 113 aa25.08■■□□□ 1.61
UBE2F-215ENST00000441728 TESPA1A2RU30 521 aaPredicted RBP25.08■■□□□ 1.61
UBE2F-215ENST00000441728 CCL15Q16663 113 aa25.08■■□□□ 1.61
UBE2F-215ENST00000441728 TEKT1Q969V4 418 aa25.08■■□□□ 1.61
UBE2F-215ENST00000441728 HOOK2Q96ED9 719 aa25.08■■□□□ 1.61
UBE2F-215ENST00000441728 TMEM106CQ9BVX2 250 aa25.08■■□□□ 1.61
UBE2F-215ENST00000441728 TMEM39BQ9GZU3 492 aa25.08■■□□□ 1.61
UBE2F-215ENST00000441728 SPINK5Q9NQ38 1064 aaPredicted RBP25.08■■□□□ 1.61
UBE2F-215ENST00000441728 ARAP2Q8WZ64 1704 aa25.07■■□□□ 1.6
UBE2F-215ENST00000441728 OTUD5Q96G74 571 aa25.07■■□□□ 1.6
UBE2F-215ENST00000441728 LAMB1P07942 1786 aa25.07■■□□□ 1.6
UBE2F-215ENST00000441728 NBPF7P0C2Y1 421 aaPredicted RBP25.06■■□□□ 1.6
UBE2F-215ENST00000441728 VGLL4Q14135 290 aa25.06■■□□□ 1.6
UBE2F-215ENST00000441728 PTPN18Q99952 460 aa25.06■■□□□ 1.6
UBE2F-215ENST00000441728 BICC1Q9H694 974 aaKnown RBP25.06■■□□□ 1.6
UBE2F-215ENST00000441728 RIPOR2Q9Y4F9 1068 aa25.06■■□□□ 1.6
UBE2F-215ENST00000441728 MAST3O60307 1309 aa25.06■■□□□ 1.6
UBE2F-215ENST00000441728 POTEFA5A3E0 1075 aa25.05■■□□□ 1.6
UBE2F-215ENST00000441728 HDLBPQ00341 1268 aaKnown RBP25.05■■□□□ 1.6
UBE2F-215ENST00000441728 NBPF11Q86T75 865 aa25.05■■□□□ 1.6
UBE2F-215ENST00000441728 OTOFQ9HC10 1997 aa25.05■■□□□ 1.6
UBE2F-215ENST00000441728 KIF22Q14807 665 aa25.04■■□□□ 1.6
UBE2F-215ENST00000441728 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.04■■□□□ 1.6
UBE2F-215ENST00000441728 FBXO33Q7Z6M2 555 aa25.04■■□□□ 1.6
UBE2F-215ENST00000441728 TEPSINQ96N21 525 aa25.04■■□□□ 1.6
UBE2F-215ENST00000441728 IFIT1P09914 478 aaKnown RBP25.03■■□□□ 1.6
UBE2F-215ENST00000441728 ZEB1P37275 1124 aaPredicted RBP25.03■■□□□ 1.6
UBE2F-215ENST00000441728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.03■■□□□ 1.6
UBE2F-215ENST00000441728 CNKSR2Q8WXI2 1034 aa25.03■■□□□ 1.6
UBE2F-215ENST00000441728 BRI3BPQ8WY22 251 aa25.03■■□□□ 1.6
UBE2F-215ENST00000441728 MS4A4AQ96JQ5 239 aa25.03■■□□□ 1.6
UBE2F-215ENST00000441728 PDE8BO95263 885 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 CACNB3P54284 484 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 SLC9C1Q4G0N8 1177 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 LRRC24Q50LG9 513 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 DCAF15Q66K64 600 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 CDAN1Q8IWY9 1227 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 ARMC5Q96C12 935 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 KAZALD1Q96I82 304 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 WRNIP1Q96S55 665 aa25.02■■□□□ 1.6
UBE2F-215ENST00000441728 CETPP11597 493 aa25.01■■□□□ 1.59
UBE2F-215ENST00000441728 UTYO14607 1347 aa25.01■■□□□ 1.59
UBE2F-215ENST00000441728 SPDYE5A6NIY4 337 aa25■■□□□ 1.59
UBE2F-215ENST00000441728 SLC4A8Q2Y0W8 1093 aa25■■□□□ 1.59
UBE2F-215ENST00000441728 RABL6Q3YEC7 729 aaPredicted RBP25■■□□□ 1.59
UBE2F-215ENST00000441728 ERO1BQ86YB8 467 aa25■■□□□ 1.59
UBE2F-215ENST00000441728 SUGT1Q9Y2Z0 365 aa25■■□□□ 1.59
UBE2F-215ENST00000441728 PTPRCP08575 1304 aa25■■□□□ 1.59
UBE2F-215ENST00000441728 BCAMP50895 628 aa24.99■■□□□ 1.59
UBE2F-215ENST00000441728 PUM3Q15397 648 aaKnown RBP24.99■■□□□ 1.59
UBE2F-215ENST00000441728 GRIK5Q16478 980 aa24.99■■□□□ 1.59
UBE2F-215ENST00000441728 FAM83AQ86UY5 434 aa24.99■■□□□ 1.59
UBE2F-215ENST00000441728 ZDHHC15Q96MV8 337 aa24.99■■□□□ 1.59
UBE2F-215ENST00000441728 EN2P19622 333 aaPredicted RBP24.98■■□□□ 1.59
UBE2F-215ENST00000441728 SNAPC2Q13487 334 aa24.98■■□□□ 1.59
UBE2F-215ENST00000441728 FAM43AQ8N2R8 423 aa24.98■■□□□ 1.59
UBE2F-215ENST00000441728 SLC5A1P13866 664 aa24.97■■□□□ 1.59
UBE2F-215ENST00000441728 PTCH2Q9Y6C5 1203 aa24.97■■□□□ 1.59
UBE2F-215ENST00000441728 FKBP1CQ5VVH2 108 aa24.96■■□□□ 1.59
UBE2F-215ENST00000441728 MRPL50Q8N5N7 158 aaKnown RBP24.96■■□□□ 1.59
UBE2F-215ENST00000441728 ANKRD44Q8N8A2 993 aa24.96■■□□□ 1.59
UBE2F-215ENST00000441728 KLHDC4Q8TBB5 520 aa24.96■■□□□ 1.59
UBE2F-215ENST00000441728 WDR66Q8TBY9 1149 aa24.96■■□□□ 1.59
UBE2F-215ENST00000441728 MRIQ9BWK5 157 aa24.96■■□□□ 1.59
UBE2F-215ENST00000441728 ZNF341Q9BYN7 854 aa24.96■■□□□ 1.59
UBE2F-215ENST00000441728 ZCCHC17Q9NP64 241 aaKnown RBP24.96■■□□□ 1.59
UBE2F-215ENST00000441728 RBBP6Q7Z6E9 1792 aaKnown RBP24.95■■□□□ 1.59
UBE2F-215ENST00000441728 ZNF316A6NFI3 1004 aaPredicted RBP24.95■■□□□ 1.58
UBE2F-215ENST00000441728 ZKSCAN4Q969J2 545 aaPredicted RBP24.95■■□□□ 1.58
UBE2F-215ENST00000441728 ZNF333Q96JL9 665 aa24.95■■□□□ 1.58
UBE2F-215ENST00000441728 SNCAIPQ9Y6H5 919 aa24.95■■□□□ 1.58
UBE2F-215ENST00000441728 KIF16BQ96L93 1317 aa24.94■■□□□ 1.58
UBE2F-215ENST00000441728 TLR2O60603 784 aa24.94■■□□□ 1.58
UBE2F-215ENST00000441728 MYCP01106 439 aaPredicted RBP24.94■■□□□ 1.58
UBE2F-215ENST00000441728 PPIL2Q13356 520 aa24.94■■□□□ 1.58
UBE2F-215ENST00000441728 HHIPL2Q6UWX4 724 aa24.94■■□□□ 1.58
UBE2F-215ENST00000441728 VGLL2Q8N8G2 317 aa24.94■■□□□ 1.58
UBE2F-215ENST00000441728 BTBD19C9JJ37 291 aa24.92■■□□□ 1.58
UBE2F-215ENST00000441728 IRF6O14896 467 aa24.92■■□□□ 1.58
UBE2F-215ENST00000441728 APOBEC3HQ6NTF7 200 aaKnown RBP24.92■■□□□ 1.58
UBE2F-215ENST00000441728 MIGA2Q7L4E1 593 aa24.92■■□□□ 1.58
UBE2F-215ENST00000441728 LPIN2Q92539 896 aa24.92■■□□□ 1.58
UBE2F-215ENST00000441728 GNL3LQ9NVN8 582 aaKnown RBP24.92■■□□□ 1.58
UBE2F-215ENST00000441728 RPAP1Q9BWH6 1393 aaPredicted RBP24.92■■□□□ 1.58
UBE2F-215ENST00000441728 EYA2O00167 538 aa24.91■■□□□ 1.58
UBE2F-215ENST00000441728 GNRH1P01148 92 aa24.91■■□□□ 1.58
UBE2F-215ENST00000441728 PPATQ06203 517 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms