RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 GLT8D2Q9H1C3 349 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 ZNF646O15015 1829 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 CCDC194A0A1B0GVG4 234 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 GOLGA8AA7E2F4 631 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 GOLGA8BA8MQT2 603 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 TTC22Q5TAA0 569 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 TSHZ3Q63HK5 1081 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 TMED8Q6PL24 325 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 FAM43AQ8N2R8 423 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 JARID2Q92833 1246 aaPredicted RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 IL17RAQ96F46 866 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 ZNHIT6Q9NWK9 470 aaKnown RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 DOCK2Q92608 1830 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 LTBP1Q14766 1721 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 NRXN2Q9P2S2 1712 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 CBFA2T2O43439 604 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 CASTP20810 708 aaKnown RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 ATP2B4P23634 1241 aa5.27□□□□□ -1.57
SCN3A-204ENST00000440431 PTPN12Q05209 780 aaKnown RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 PUM3Q15397 648 aaKnown RBP5.27□□□□□ -1.57
SCN3A-204ENST00000440431 HIBADHP31937 336 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 DDIT3P35638 169 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 IARSP41252 1262 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 ME1P48163 572 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 NT5C2P49902 561 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 EIF5P55010 431 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 RBM6P78332 1123 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 AMPD3Q01432 767 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 GSE1Q14687 1217 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 PRPF40BQ6NWY9 871 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 ATG9AQ7Z3C6 839 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 CEP57L1Q8IYX8 460 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 KLHDC4Q8TBB5 520 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 C8orf76Q96K31 380 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 NEK1Q96PY6 1258 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 ZNF219Q9P2Y4 722 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 PA2G4Q9UQ80 394 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 CLEC11AQ9Y240 323 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 MAGEB6P1A0A0J9YX57 407 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 CD2BP2O95400 341 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 MAP4K4O95819 1239 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 PDE1AP54750 535 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 TRIM28Q13263 835 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 COL9A3Q14050 684 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 PPP2R5BQ15173 497 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 TMEM67Q5HYA8 995 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 TBC1D9Q6ZT07 1266 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 LPIN2Q92539 896 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 NAP1L5Q96NT1 182 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 BCL2L12Q9HB09 334 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 RGS17Q9UGC6 210 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 ZBTB1Q9Y2K1 713 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 RGPD3A6NKT7 1758 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 RGPD4Q7Z3J3 1758 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 SMTNL1A8MU46 457 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 CTAGE5O15320 804 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 RNF113AO15541 343 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 CCDC192P0DO97 292 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 SDSP20132 328 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 CALML3P27482 149 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 TNFAIP1Q13829 316 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 WTAPQ15007 396 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 DPY19L2Q6NUT2 758 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 PAXIP1Q6ZW49 1069 aaPredicted RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 SMIM5Q71RC9 77 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 TICAM2Q86XR7 235 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 LINC00116Q8NCU8 138 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 HELLSQ9NRZ9 838 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 TLR7Q9NYK1 1049 aaKnown RBP5.26□□□□□ -1.57
SCN3A-204ENST00000440431 MYO6Q9UM54 1294 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 RIC1Q4ADV7 1423 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 RTL9Q8NET4 1388 aa5.26□□□□□ -1.57
SCN3A-204ENST00000440431 LOC102724428A0A0B4J2F2 783 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 A0A0U1RQG5 324 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-204ENST00000440431 ERVV-1B6SEH8 477 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 PCCAP05165 728 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-204ENST00000440431 ADRA2BP18089 450 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 RBM25P49756 843 aaKnown RBP5.25□□□□□ -1.57
SCN3A-204ENST00000440431 SIK1P57059 783 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 GPS2Q13227 327 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 KANK3Q6NY19 840 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 DPP8Q6V1X1 898 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-204ENST00000440431 PAG1Q9NWQ8 432 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 LAMA4Q16363 1823 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 IGSF3O75054 1194 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 CSF1RP07333 972 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 POTEJP0CG39 1038 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 TSPY3P0CV98 308 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 TSPY8P0CW00 308 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 NLRP5P59047 1200 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 RPS8P62241 208 aaKnown RBP5.25□□□□□ -1.57
SCN3A-204ENST00000440431 FOXD4L6Q3SYB3 417 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-204ENST00000440431 SLC9C2Q5TAH2 1124 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 FOXD4L3Q6VB84 417 aaPredicted RBP5.25□□□□□ -1.57
SCN3A-204ENST00000440431 NIM1KQ8IY84 436 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 ZNF34Q8IZ26 560 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 ERMNQ8TAM6 284 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 SPATA32Q96LK8 384 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 ANTXR1Q9H6X2 564 aa5.25□□□□□ -1.57
SCN3A-204ENST00000440431 SLC4A4Q9Y6R1 1079 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms