RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 WDR24Q96S15 920 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 MED23Q9ULK4 1368 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 TRIM66O15016 1216 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 ADD1P35611 737 aaKnown RBP10.39□□□□□ -0.75
COPB1-202ENST00000439561 AFMP43652 599 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 LONRF3Q496Y0 759 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 WWC2Q6AWC2 1192 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 NCOA7Q8NI08 942 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 SMARCC2Q8TAQ2 1214 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 NUP133Q8WUM0 1156 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 IP6K1Q92551 441 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 SLC26A6Q9BXS9 759 aa10.39□□□□□ -0.75
COPB1-202ENST00000439561 IRX2Q9BZI1 471 aaPredicted RBP10.39□□□□□ -0.75
COPB1-202ENST00000439561 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.39□□□□□ -0.75
COPB1-202ENST00000439561 WDHD1O75717 1129 aaPredicted RBP10.38□□□□□ -0.75
COPB1-202ENST00000439561 CHMP4BP1P59074 171 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 FBXO18Q8NFZ0 1043 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 HAUS7Q99871 368 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 RAI14Q9P0K7 980 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 RIMS1Q86UR5 1692 aaKnown RBP10.38□□□□□ -0.75
COPB1-202ENST00000439561 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 TNRQ92752 1358 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 RNF113AO15541 343 aaKnown RBP10.38□□□□□ -0.75
COPB1-202ENST00000439561 YEATS4O95619 227 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 TUBB4AP04350 444 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 AXDND1Q5T1B0 1012 aaPredicted RBP10.38□□□□□ -0.75
COPB1-202ENST00000439561 CC2D1AQ6P1N0 951 aaPredicted RBP10.38□□□□□ -0.75
COPB1-202ENST00000439561 BRAPQ7Z569 592 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 MPHOSPH8Q99549 860 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 PLEKHA4Q9H4M7 779 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 L2HGDHQ9H9P8 463 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 PDE11AQ9HCR9 933 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 PCDHA5Q9Y5H7 936 aa10.38□□□□□ -0.75
COPB1-202ENST00000439561 PHLPP2Q6ZVD8 1323 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 A0A1W2PQ27 194 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 A0A1W2PQ64 194 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 A0A1W2PQD8 194 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 GOLGA6L9A6NEM1 432 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 TADA3O75528 432 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 CCDC175P0C221 793 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 IARSP41252 1262 aaKnown RBP10.37□□□□□ -0.75
COPB1-202ENST00000439561 PTPN12Q05209 780 aaKnown RBP10.37□□□□□ -0.75
COPB1-202ENST00000439561 FILIP1LQ4L180 1135 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 TOGARAM2Q6ZUX3 1019 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 VPS37DQ86XT2 251 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 GPR161Q8N6U8 529 aaKnown RBP10.37□□□□□ -0.75
COPB1-202ENST00000439561 GDAP1L1Q96MZ0 367 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 RABEP2Q9H5N1 569 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 NRKQ7Z2Y5 1582 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 ZNF609O15014 1411 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 GOLGA8AA7E2F4 631 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 KCNA6P17658 529 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 LONRF2Q1L5Z9 754 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 CCDC57Q2TAC2 916 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 CAGE1Q8TC20 777 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 METTL22Q9BUU2 404 aaPredicted RBP10.37□□□□□ -0.75
COPB1-202ENST00000439561 NPHP4O75161 1426 aaPredicted RBP10.37□□□□□ -0.75
COPB1-202ENST00000439561 COBLO75128 1261 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 GRAMD1CQ8IYS0 662 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 ZNF274Q96GC6 653 aaPredicted RBP10.37□□□□□ -0.75
COPB1-202ENST00000439561 ACBD3Q9H3P7 528 aa10.37□□□□□ -0.75
COPB1-202ENST00000439561 DIP2CQ9Y2E4 1556 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 A0A1B0GUL7 405 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 POLR2DO15514 142 aaKnown RBP10.36□□□□□ -0.75
COPB1-202ENST00000439561 CDKL5O76039 1030 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 CMA1P23946 247 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 KRT40Q6A162 431 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 SIRT1Q96EB6 747 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 PCMTD1Q96MG8 357 aaPredicted RBP10.36□□□□□ -0.75
COPB1-202ENST00000439561 HELLSQ9NRZ9 838 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 DACH1Q9UI36 760 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 USP31Q70CQ4 1352 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 NEO1Q92859 1461 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 MAST3O60307 1309 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 KIF28PB7ZC32 967 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 MTF1Q14872 753 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 TSGA10IPQ3SY00 556 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 ZNF496Q96IT1 587 aaPredicted RBP10.36□□□□□ -0.75
COPB1-202ENST00000439561 ADAM21Q9UKJ8 722 aa10.36□□□□□ -0.75
COPB1-202ENST00000439561 FOXN1O15353 648 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 FDPSP14324 419 aaKnown RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 HINFPQ9BQA5 517 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 M0R2C6 588 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 MYO1CO00159 1063 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 CCT6AP40227 531 aaKnown RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 CABP4P57796 275 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 USPL1Q5W0Q7 1092 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 SPECC1LQ69YQ0 1117 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 ILDR1Q86SU0 546 aaPredicted RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 VSTM4Q8IW00 320 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 NUP88Q99567 741 aaPredicted RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 DSCC1Q9BVC3 393 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 ALDH8A1Q9H2A2 487 aaPredicted RBP10.35□□□□□ -0.75
COPB1-202ENST00000439561 COPRSQ9NQ92 184 aa10.35□□□□□ -0.75
COPB1-202ENST00000439561 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms