RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 HLFQ16534 295 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 STX1AQ16623 288 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 PHKBQ93100 1093 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 CCDC102AQ96A19 550 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 ADGRL3Q9HAR2 1447 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 FER1L4A9Z1Z3 1794 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 STARD3NLO95772 234 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 OAS2P29728 719 aaKnown RBP11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 EVCP57679 992 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 ZNF827Q17R98 1081 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 MPHOSPH8Q99549 860 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 CALCOCO1Q9P1Z2 691 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 RHOXF2BP0C7M4 288 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 ITGA6P23229 1130 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 RHOXF2Q9BQY4 288 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 PUS7LQ9H0K6 701 aaKnown RBP11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 GREM2Q9H772 168 aa11.48□□□□□ -0.57
CDC42SE1-202ENST00000439374 GABPB1Q06547 395 aaPredicted RBP11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 BMS1Q14692 1282 aaKnown RBP11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 MAST3O60307 1309 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 PIK3C2AO00443 1686 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 B4E1Z4 1266 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 FGAP02671 866 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 CAPN2P17655 700 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 ADD1P35611 737 aaKnown RBP11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 RFX5P48382 616 aaPredicted RBP11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 SMARCE1Q969G3 411 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 ARGLU1Q9NWB6 273 aaPredicted RBP11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 VPS18Q9P253 973 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 hCG_1642624A0A1W2PR95 340 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 ADKP55263 362 aaKnown RBP11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 FOXO4P98177 505 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 ERO1AQ96HE7 468 aa11.47□□□□□ -0.57
CDC42SE1-202ENST00000439374 TULP1O00294 542 aaPredicted RBP11.46□□□□□ -0.57
CDC42SE1-202ENST00000439374 IRS4O14654 1257 aaPredicted RBP11.46□□□□□ -0.57
CDC42SE1-202ENST00000439374 GPAA1O43292 621 aa11.46□□□□□ -0.57
CDC42SE1-202ENST00000439374 PNMA6AP0CW24 399 aaPredicted RBP11.46□□□□□ -0.57
CDC42SE1-202ENST00000439374 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.57
CDC42SE1-202ENST00000439374 PPP1R13BQ96KQ4 1090 aa11.46□□□□□ -0.57
CDC42SE1-202ENST00000439374 ANO10Q9NW15 660 aa11.46□□□□□ -0.57
CDC42SE1-202ENST00000439374 VPS37DQ86XT2 251 aa11.46□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZNF396Q96N95 335 aaPredicted RBP11.46□□□□□ -0.58
CDC42SE1-202ENST00000439374 SUGCTQ9HAC7 445 aa11.46□□□□□ -0.58
CDC42SE1-202ENST00000439374 POLD4Q9HCU8 107 aa11.46□□□□□ -0.58
CDC42SE1-202ENST00000439374 LCMT1Q9UIC8 334 aa11.46□□□□□ -0.58
CDC42SE1-202ENST00000439374 SETD1AO15047 1707 aaKnown RBP11.46□□□□□ -0.58
CDC42SE1-202ENST00000439374 ANKRD18BA2A2Z9 1011 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 TDO2P48775 406 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 NDUFA8P51970 172 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 RAD51AP2Q09MP3 1159 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 PLA2G4DQ86XP0 818 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 IPO4Q8TEX9 1081 aaKnown RBP11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 SLAIN2Q9P270 581 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 LRP2BPQ9P2M1 347 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZNF609O15014 1411 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 TMEM232C9JQI7 657 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 TRIM29Q14134 588 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 TMEM87AQ8NBN3 555 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 SLC3A2P08195 630 aaKnown RBP11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 STX17P56962 302 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 E2F4Q16254 413 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 BRINP3Q76B58 766 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 NSUN7Q8NE18 718 aaKnown RBP11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 ZBTB1Q9Y2K1 713 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 MEGF6O75095 1541 aa11.45□□□□□ -0.58
CDC42SE1-202ENST00000439374 PDIA3P30101 505 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 E4F1Q66K89 784 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 CCDC12Q8WUD4 166 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 PIGBQ92521 554 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 AKAP2Q9Y2D5 859 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 AKAP12Q02952 1782 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 PCDH11XQ9BZA7 1347 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 PCDH11YQ9BZA8 1340 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 KDM6AO15550 1401 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 H7C1W4 665 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 PHKA1P46020 1223 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 UBASH3AP57075 661 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 TPM4P67936 248 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 PIP4K2BP78356 416 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 CCZ1BP86790 482 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 TCIRG1Q13488 830 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 LRRFIP1Q32MZ4 808 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 DNAJC21Q5F1R6 531 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 DPF2Q92785 391 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 NAT10Q9H0A0 1025 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 CLIC4Q9Y696 253 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 MORC2Q9Y6X9 1032 aaPredicted RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 COL15A1P39059 1388 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 UBE2Q2LH0YL09 131 aa11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 IFIT3O14879 490 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 MRPS25P82663 173 aaKnown RBP11.44□□□□□ -0.58
CDC42SE1-202ENST00000439374 DHX8Q14562 1220 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms