RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 CDHR2Q9BYE9 1310 aa9.41□□□□□ -0.9
HMGB2-202ENST00000438704 PCCAP05165 728 aaPredicted RBP9.41□□□□□ -0.9
HMGB2-202ENST00000438704 PIP4K2AP48426 406 aaPredicted RBP9.41□□□□□ -0.9
HMGB2-202ENST00000438704 AGERQ15109 404 aa9.41□□□□□ -0.9
HMGB2-202ENST00000438704 TTC22Q5TAA0 569 aa9.41□□□□□ -0.9
HMGB2-202ENST00000438704 SYTL4Q96C24 671 aaPredicted RBP9.41□□□□□ -0.9
HMGB2-202ENST00000438704 BICC1Q9H694 974 aaKnown RBP9.41□□□□□ -0.9
HMGB2-202ENST00000438704 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
HMGB2-202ENST00000438704 ZBTB1Q9Y2K1 713 aa9.41□□□□□ -0.9
HMGB2-202ENST00000438704 AFDNP55196 1824 aaKnown RBP9.4□□□□□ -0.9
HMGB2-202ENST00000438704 A0A087WZG4 1122 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 KCNQ2O43526 872 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 LILRB3O75022 631 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 ZIC2O95409 532 aaPredicted RBP9.4□□□□□ -0.9
HMGB2-202ENST00000438704 HMGB2P26583 209 aaKnown RBP9.4□□□□□ -0.9
HMGB2-202ENST00000438704 CRKLP46109 303 aaKnown RBP9.4□□□□□ -0.9
HMGB2-202ENST00000438704 RFX5P48382 616 aaPredicted RBP9.4□□□□□ -0.9
HMGB2-202ENST00000438704 PDE1AP54750 535 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 ITPK1Q13572 414 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 ARID5BQ14865 1188 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 HELBQ8NG08 1087 aaPredicted RBP9.4□□□□□ -0.9
HMGB2-202ENST00000438704 RHPN1Q8TCX5 695 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 ACSBG1Q96GR2 724 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 C1QTNF2Q9BXJ5 285 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 EXOC6BQ9Y2D4 811 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 MAP4K5Q9Y4K4 846 aa9.4□□□□□ -0.9
HMGB2-202ENST00000438704 MYH14Q7Z406 1995 aaKnown RBP9.4□□□□□ -0.9
HMGB2-202ENST00000438704 SBF2Q86WG5 1849 aa9.4□□□□□ -0.91
HMGB2-202ENST00000438704 SURF6O75683 361 aaKnown RBP9.39□□□□□ -0.91
HMGB2-202ENST00000438704 FOXO4P98177 505 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 QPCTQ16769 361 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 EPHA10Q5JZY3 1008 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 ZNF772Q68DY9 489 aaPredicted RBP9.39□□□□□ -0.91
HMGB2-202ENST00000438704 CLEC4GQ6UXB4 293 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 UBE3BQ7Z3V4 1068 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 ZNF34Q8IZ26 560 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 ZBTB38Q8NAP3 1195 aaPredicted RBP9.39□□□□□ -0.91
HMGB2-202ENST00000438704 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 QTRT2Q9H974 415 aaKnown RBP9.39□□□□□ -0.91
HMGB2-202ENST00000438704 BTAF1O14981 1849 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 ANKRD36CQ5JPF3 1778 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 LY75O60449 1722 aa9.39□□□□□ -0.91
HMGB2-202ENST00000438704 TTC41PQ6P2S7 1318 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 ATP5J2-PTCD1G3V325 749 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 CAMTA2O94983 1202 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 CSF1RP07333 972 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 NR3C2P08235 984 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 VSIG8P0DPA2 414 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 GSPT1P15170 499 aaKnown RBP9.38□□□□□ -0.91
HMGB2-202ENST00000438704 MX1P20591 662 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 GRM5P41594 1212 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 VEGFBP49765 207 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 NLRP10Q86W26 655 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 DZIP3Q86Y13 1208 aaKnown RBP9.38□□□□□ -0.91
HMGB2-202ENST00000438704 TRMT44Q8IYL2 757 aaKnown RBP9.38□□□□□ -0.91
HMGB2-202ENST00000438704 TSC1Q92574 1164 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 GPKOWQ92917 476 aaPredicted RBP eCLIP9.38□□□□□ -0.91
HMGB2-202ENST00000438704 ITPKCQ96DU7 683 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 TUBGCP6Q96RT7 1819 aa9.38□□□□□ -0.91
HMGB2-202ENST00000438704 SMARCA5O60264 1052 aaPredicted RBP9.37□□□□□ -0.91
HMGB2-202ENST00000438704 CDC45O75419 566 aa9.37□□□□□ -0.91
HMGB2-202ENST00000438704 CIAO1O76071 339 aa9.37□□□□□ -0.91
HMGB2-202ENST00000438704 LORP23490 312 aaPredicted RBP9.37□□□□□ -0.91
HMGB2-202ENST00000438704 ANP32AP39687 249 aaKnown RBP9.37□□□□□ -0.91
HMGB2-202ENST00000438704 RBM6P78332 1123 aaKnown RBP9.37□□□□□ -0.91
HMGB2-202ENST00000438704 PTPN12Q05209 780 aaKnown RBP9.37□□□□□ -0.91
HMGB2-202ENST00000438704 PARP10Q53GL7 1025 aa9.37□□□□□ -0.91
HMGB2-202ENST00000438704 FAM196AQ6ZSG2 479 aa9.37□□□□□ -0.91
HMGB2-202ENST00000438704 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
HMGB2-202ENST00000438704 OTUD7AQ8TE49 926 aaPredicted RBP9.37□□□□□ -0.91
HMGB2-202ENST00000438704 GPR108Q9NPR9 543 aa9.37□□□□□ -0.91
HMGB2-202ENST00000438704 NUP98P52948 1817 aa9.37□□□□□ -0.91
HMGB2-202ENST00000438704 CLK2P49760 499 aaKnown RBP9.36□□□□□ -0.91
HMGB2-202ENST00000438704 G3BP1Q13283 466 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGB2-202ENST00000438704 HLFQ16534 295 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 SH3BP5LQ7L8J4 393 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 NPM2Q86SE8 214 aaKnown RBP9.36□□□□□ -0.91
HMGB2-202ENST00000438704 TICAM2Q86XR7 235 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 CLASRPQ8N2M8 674 aaKnown RBP9.36□□□□□ -0.91
HMGB2-202ENST00000438704 MEIOBQ8N635 442 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 LINC00116Q8NCU8 138 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 TBC1D32Q96NH3 1257 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 ZFAND3Q9H8U3 227 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 BCORQ6W2J9 1755 aa9.36□□□□□ -0.91
HMGB2-202ENST00000438704 EPB41L2O43491 1005 aaKnown RBP9.35□□□□□ -0.91
HMGB2-202ENST00000438704 RPS6KA4O75676 772 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 SASH1O94885 1247 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 UPP2O95045 317 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 HSP90B1P14625 803 aaKnown RBP9.35□□□□□ -0.91
HMGB2-202ENST00000438704 SLC27A3Q5K4L6 730 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 LMBR1LQ6UX01 489 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 PI4K2BQ8TCG2 481 aa9.35□□□□□ -0.91
HMGB2-202ENST00000438704 IPO9Q96P70 1041 aaKnown RBP9.35□□□□□ -0.91
HMGB2-202ENST00000438704 UPF2Q9HAU5 1272 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms