RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
CPNE1-214ENST00000435747 PRKCZQ05513 592 aa13.46□□□□□ -0.25
CPNE1-214ENST00000435747 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
CPNE1-214ENST00000435747 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
CPNE1-214ENST00000435747 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
CPNE1-214ENST00000435747 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
CPNE1-214ENST00000435747 CFAP100Q494V2 611 aa13.45□□□□□ -0.26
CPNE1-214ENST00000435747 ZBTB38Q8NAP3 1195 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-214ENST00000435747 MAFAQ8NHW3 353 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-214ENST00000435747 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 TNFRSF10AO00220 468 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 PDE8AO60658 829 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 HOXD11P31277 338 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-214ENST00000435747 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
CPNE1-214ENST00000435747 SNAPC2Q13487 334 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 TNFAIP1Q13829 316 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
CPNE1-214ENST00000435747 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 CCDC184Q52MB2 194 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
CPNE1-214ENST00000435747 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
CPNE1-214ENST00000435747 PRMT6Q96LA8 375 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-214ENST00000435747 CDC5LQ99459 802 aaKnown RBP13.44□□□□□ -0.26
CPNE1-214ENST00000435747 ADGRA2Q96PE1 1338 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 SPDYE5A6NIY4 337 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 F8W031 263 aaPredicted RBP13.43□□□□□ -0.26
CPNE1-214ENST00000435747 ADCY3O60266 1144 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 INHAP05111 366 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 ZNF853P0CG23 659 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 FCGRTP55899 365 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 ZNF697Q5TEC3 545 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.43□□□□□ -0.26
CPNE1-214ENST00000435747 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 BDP1A6H8Y1 2624 aa13.43□□□□□ -0.26
CPNE1-214ENST00000435747 TMEM265A0A087WTH1 108 aa13.42□□□□□ -0.26
CPNE1-214ENST00000435747 RBM5P52756 815 aaKnown RBP eCLIP13.42□□□□□ -0.26
CPNE1-214ENST00000435747 CRISPLD2Q9H0B8 497 aa13.42□□□□□ -0.26
CPNE1-214ENST00000435747 PAK6Q9NQU5 681 aaPredicted RBP13.42□□□□□ -0.26
CPNE1-214ENST00000435747 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
CPNE1-214ENST00000435747 LEMD3Q9Y2U8 911 aa13.42□□□□□ -0.26
CPNE1-214ENST00000435747 AOX1Q06278 1338 aa13.41□□□□□ -0.26
CPNE1-214ENST00000435747 CDH23Q9H251 3354 aa13.41□□□□□ -0.26
CPNE1-214ENST00000435747 IRF6O14896 467 aa13.41□□□□□ -0.26
CPNE1-214ENST00000435747 ELNP15502 786 aa13.41□□□□□ -0.26
CPNE1-214ENST00000435747 ZEB1P37275 1124 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-214ENST00000435747 ERO1BQ86YB8 467 aa13.41□□□□□ -0.26
CPNE1-214ENST00000435747 CERS5Q8N5B7 392 aa13.41□□□□□ -0.26
CPNE1-214ENST00000435747 CDX2Q99626 313 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-214ENST00000435747 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
CPNE1-214ENST00000435747 GABRQQ9UN88 632 aa13.41□□□□□ -0.26
CPNE1-214ENST00000435747 DOCK3Q8IZD9 2030 aa13.4□□□□□ -0.26
CPNE1-214ENST00000435747 APAF1O14727 1248 aa13.4□□□□□ -0.26
CPNE1-214ENST00000435747 HOXB7P09629 217 aa13.4□□□□□ -0.26
CPNE1-214ENST00000435747 ANKLE1Q8NAG6 615 aa13.4□□□□□ -0.26
CPNE1-214ENST00000435747 ARAP2Q8WZ64 1704 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 MYH3P11055 1940 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 PDHXO00330 501 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 KLRK1P26718 216 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 PPIL2Q13356 520 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 CDAN1Q8IWY9 1227 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 TEPSINQ96N21 525 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 NBPF3Q9H094 633 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 SNCAIPQ9Y6H5 919 aa13.39□□□□□ -0.27
CPNE1-214ENST00000435747 DDX60LQ5H9U9 1706 aaKnown RBP13.39□□□□□ -0.27
CPNE1-214ENST00000435747 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-214ENST00000435747 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-214ENST00000435747 FLT3LGP49771 235 aa13.38□□□□□ -0.27
CPNE1-214ENST00000435747 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
CPNE1-214ENST00000435747 TJAP1Q5JTD0 557 aa13.38□□□□□ -0.27
CPNE1-214ENST00000435747 ANKRD23Q86SG2 305 aa13.38□□□□□ -0.27
CPNE1-214ENST00000435747 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-214ENST00000435747 C11orf49Q9H6J7 331 aa13.38□□□□□ -0.27
CPNE1-214ENST00000435747 CD209Q9NNX6 404 aa13.38□□□□□ -0.27
CPNE1-214ENST00000435747 ZNF70Q9UC06 446 aaPredicted RBP13.38□□□□□ -0.27
CPNE1-214ENST00000435747 KCNJ4P48050 445 aa13.37□□□□□ -0.27
CPNE1-214ENST00000435747 TNNI2P48788 182 aa13.37□□□□□ -0.27
CPNE1-214ENST00000435747 MDM2Q00987 491 aaPredicted RBP13.37□□□□□ -0.27
CPNE1-214ENST00000435747 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
CPNE1-214ENST00000435747 HDGFL1Q5TGJ6 251 aa13.37□□□□□ -0.27
CPNE1-214ENST00000435747 RIC3Q7Z5B4 369 aa13.37□□□□□ -0.27
CPNE1-214ENST00000435747 TMEM39BQ9GZU3 492 aa13.37□□□□□ -0.27
CPNE1-214ENST00000435747 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.37□□□□□ -0.274e-13■□□□□ 8
CPNE1-214ENST00000435747 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
CPNE1-214ENST00000435747 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
CPNE1-214ENST00000435747 CTSWP56202 376 aa13.36□□□□□ -0.27
CPNE1-214ENST00000435747 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-214ENST00000435747 CCDC191Q8NCU4 936 aa13.36□□□□□ -0.27
CPNE1-214ENST00000435747 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
CPNE1-214ENST00000435747 PARK7Q99497 189 aaKnown RBP13.36□□□□□ -0.27
CPNE1-214ENST00000435747 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
CPNE1-214ENST00000435747 TDRD3Q9H7E2 651 aaKnown RBP13.36□□□□□ -0.27
CPNE1-214ENST00000435747 IFT57Q9NWB7 429 aa13.36□□□□□ -0.27
CPNE1-214ENST00000435747 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
CPNE1-214ENST00000435747 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
CPNE1-214ENST00000435747 BCRP11274 1271 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 FOSL2P15408 326 aa13.35□□□□□ -0.27
CPNE1-214ENST00000435747 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms