RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 FAM84BQ96KN1 310 aaPredicted RBP14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 RBBP6Q7Z6E9 1792 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 CCL15-CCL14A0A0B4J2E2 113 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 CRKP46108 304 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 TNNI2P48788 182 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 MAP3K9P80192 1104 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 ARHGEF6Q15052 776 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 CCL15Q16663 113 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 SLC4A10Q6U841 1118 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 WDR63Q8IWG1 891 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 TEPSINQ96N21 525 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 PUS3Q9BZE2 481 aaKnown RBP14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 TMEM39BQ9GZU3 492 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 ZFYVE28Q9HCC9 887 aa14.68□□□□□ -0.06
CHRNA1-207ENST00000435083 GTF2A2P52657 109 aa14.67□□□□□ -0.06
CHRNA1-207ENST00000435083 VGLL4Q14135 290 aa14.67□□□□□ -0.06
CHRNA1-207ENST00000435083 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
CHRNA1-207ENST00000435083 CSADQ9Y600 493 aa14.67□□□□□ -0.06
CHRNA1-207ENST00000435083 CHAF1AQ13111 956 aaPredicted RBP14.66□□□□□ -0.06
CHRNA1-207ENST00000435083 VPS37DQ86XT2 251 aa14.66□□□□□ -0.06
CHRNA1-207ENST00000435083 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHRNA1-207ENST00000435083 IQSEC3Q9UPP2 1182 aaPredicted RBP14.66□□□□□ -0.06
CHRNA1-207ENST00000435083 PTCH2Q9Y6C5 1203 aa14.66□□□□□ -0.06
CHRNA1-207ENST00000435083 FRAT2O75474 233 aaPredicted RBP14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 ALDH1L1O75891 902 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 GRIK5Q16478 980 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 SLC9C1Q4G0N8 1177 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 FAM43AQ8N2R8 423 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 SUCLG2Q96I99 432 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 ZNF333Q96JL9 665 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 SRCIN1Q9C0H9 1055 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 MRS2Q9HD23 443 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 ARAP2Q8WZ64 1704 aa14.65□□□□□ -0.06
CHRNA1-207ENST00000435083 WDHD1O75717 1129 aaPredicted RBP14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 MYCP01106 439 aaPredicted RBP14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 SLC4A8Q2Y0W8 1093 aa14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 KIAA0100Q14667 2235 aaKnown RBP14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 MROH5Q6ZUA9 1318 aa14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 CACNB3P54284 484 aa14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 SPINK5Q9NQ38 1064 aaPredicted RBP14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 RIPOR2Q9Y4F9 1068 aa14.64□□□□□ -0.07
CHRNA1-207ENST00000435083 HDLBPQ00341 1268 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-207ENST00000435083 CAVIN4Q5BKX8 364 aa14.63□□□□□ -0.07
CHRNA1-207ENST00000435083 FBXO33Q7Z6M2 555 aa14.63□□□□□ -0.07
CHRNA1-207ENST00000435083 TEKT1Q969V4 418 aa14.63□□□□□ -0.07
CHRNA1-207ENST00000435083 KAZALD1Q96I82 304 aa14.63□□□□□ -0.07
CHRNA1-207ENST00000435083 TMOD2Q9NZR1 351 aa14.63□□□□□ -0.07
CHRNA1-207ENST00000435083 SPDYE5A6NIY4 337 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 CETPP11597 493 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 KIF22Q14807 665 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 METTL24Q5JXM2 366 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 ERO1BQ86YB8 467 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 TBC1D22AQ8WUA7 517 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 ZKSCAN4Q969J2 545 aaPredicted RBP14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 WRNIP1Q96S55 665 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 SNCAIPQ9Y6H5 919 aa14.62□□□□□ -0.07
CHRNA1-207ENST00000435083 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
CHRNA1-207ENST00000435083 NBPF7P0C2Y1 421 aaPredicted RBP14.61□□□□□ -0.07
CHRNA1-207ENST00000435083 LRRC24Q50LG9 513 aa14.61□□□□□ -0.07
CHRNA1-207ENST00000435083 SH3TC2Q8TF17 1288 aa14.61□□□□□ -0.07
CHRNA1-207ENST00000435083 ARHGAP39Q9C0H5 1083 aa14.61□□□□□ -0.07
CHRNA1-207ENST00000435083 BTBD19C9JJ37 291 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 TLR2O60603 784 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 SNAPC2Q13487 334 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 BICC1Q9H694 974 aaKnown RBP14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 ZSWIM8A7E2V4 1837 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 IRF6O14896 467 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 BCAMP50895 628 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 LACTBP83111 547 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 HOOK2Q96ED9 719 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 ZDHHC15Q96MV8 337 aa14.6□□□□□ -0.07
CHRNA1-207ENST00000435083 PDE8BO95263 885 aa14.59□□□□□ -0.07
CHRNA1-207ENST00000435083 FXR1P51114 621 aaKnown RBP eCLIP14.59□□□□□ -0.07
CHRNA1-207ENST00000435083 FAM83AQ86UY5 434 aa14.59□□□□□ -0.07
CHRNA1-207ENST00000435083 ZCCHC17Q9NP64 241 aaKnown RBP14.59□□□□□ -0.07
CHRNA1-207ENST00000435083 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
CHRNA1-207ENST00000435083 UTYO14607 1347 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 MAST3O60307 1309 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 HTTP42858 3142 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 PPIL2Q13356 520 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 FKBP1CQ5VVH2 108 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 DCAF15Q66K64 600 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 APOBEC3HQ6NTF7 200 aaKnown RBP14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 MIGA2Q7L4E1 593 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 MRIQ9BWK5 157 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 ZNF341Q9BYN7 854 aa14.58□□□□□ -0.08
CHRNA1-207ENST00000435083 RABL6Q3YEC7 729 aaPredicted RBP14.57□□□□□ -0.08
CHRNA1-207ENST00000435083 ANKRD44Q8N8A2 993 aa14.57□□□□□ -0.08
CHRNA1-207ENST00000435083 VGLL2Q8N8G2 317 aa14.57□□□□□ -0.08
CHRNA1-207ENST00000435083 KLHDC4Q8TBB5 520 aa14.57□□□□□ -0.08
CHRNA1-207ENST00000435083 GNRH1P01148 92 aa14.56□□□□□ -0.08
CHRNA1-207ENST00000435083 IFIT1P09914 478 aaKnown RBP14.56□□□□□ -0.08
CHRNA1-207ENST00000435083 INPP5BP32019 993 aa14.56□□□□□ -0.08
CHRNA1-207ENST00000435083 PRMT2P55345 433 aa14.56□□□□□ -0.08
CHRNA1-207ENST00000435083 PPATQ06203 517 aa14.56□□□□□ -0.08
CHRNA1-207ENST00000435083 HHIPL2Q6UWX4 724 aa14.56□□□□□ -0.08
CHRNA1-207ENST00000435083 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.56□□□□□ -0.08
CHRNA1-207ENST00000435083 CPA4Q9UI42 421 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms