RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 DZIP1LQ8IYY4 767 aaKnown RBP16.87■□□□□ 0.29
CDC42EP1-204ENST00000434728 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
CDC42EP1-204ENST00000434728 TMOD2Q9NZR1 351 aa16.87■□□□□ 0.29
CDC42EP1-204ENST00000434728 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP1-204ENST00000434728 AOX1Q06278 1338 aa16.87■□□□□ 0.29
CDC42EP1-204ENST00000434728 CRKP46108 304 aa16.86■□□□□ 0.29
CDC42EP1-204ENST00000434728 SP3Q02447 781 aa16.86■□□□□ 0.29
CDC42EP1-204ENST00000434728 ARHGEF6Q15052 776 aa16.86■□□□□ 0.29
CDC42EP1-204ENST00000434728 SUCLG2Q96I99 432 aa16.86■□□□□ 0.29
CDC42EP1-204ENST00000434728 FAM84BQ96KN1 310 aaPredicted RBP16.86■□□□□ 0.29
CDC42EP1-204ENST00000434728 PUS3Q9BZE2 481 aaKnown RBP16.86■□□□□ 0.29
CDC42EP1-204ENST00000434728 KIAA0100Q14667 2235 aaKnown RBP16.86■□□□□ 0.29
CDC42EP1-204ENST00000434728 GJA5P36382 358 aa16.85■□□□□ 0.29
CDC42EP1-204ENST00000434728 TAF1CQ15572 869 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP1-204ENST00000434728 TBC1D22AQ8WUA7 517 aa16.85■□□□□ 0.29
CDC42EP1-204ENST00000434728 GCC1Q96CN9 775 aa16.85■□□□□ 0.29
CDC42EP1-204ENST00000434728 TMEM39BQ9GZU3 492 aa16.85■□□□□ 0.29
CDC42EP1-204ENST00000434728 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP1-204ENST00000434728 PTPN22Q9Y2R2 807 aa16.85■□□□□ 0.29
CDC42EP1-204ENST00000434728 HTTP42858 3142 aa16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 CCL15-CCL14A0A0B4J2E2 113 aa16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 GTF2A2P52657 109 aa16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 CCL15Q16663 113 aa16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 TEKT1Q969V4 418 aa16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 OTUD5Q96G74 571 aa16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 ZFYVE28Q9HCC9 887 aa16.84■□□□□ 0.29
CDC42EP1-204ENST00000434728 NBPF7P0C2Y1 421 aaPredicted RBP16.83■□□□□ 0.28
CDC42EP1-204ENST00000434728 CENPFP49454 3210 aa16.83■□□□□ 0.28
CDC42EP1-204ENST00000434728 MAP3K9P80192 1104 aa16.83■□□□□ 0.28
CDC42EP1-204ENST00000434728 VGLL4Q14135 290 aa16.83■□□□□ 0.28
CDC42EP1-204ENST00000434728 HOOK2Q96ED9 719 aa16.83■□□□□ 0.28
CDC42EP1-204ENST00000434728 MAST3O60307 1309 aa16.82■□□□□ 0.28
CDC42EP1-204ENST00000434728 POTEFA5A3E0 1075 aa16.82■□□□□ 0.28
CDC42EP1-204ENST00000434728 PTPN18Q99952 460 aa16.82■□□□□ 0.28
CDC42EP1-204ENST00000434728 TMEM106CQ9BVX2 250 aa16.82■□□□□ 0.28
CDC42EP1-204ENST00000434728 RIPOR2Q9Y4F9 1068 aa16.82■□□□□ 0.28
CDC42EP1-204ENST00000434728 TESPA1A2RU30 521 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 CACNB3P54284 484 aa16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 KIF22Q14807 665 aa16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 SLC9C1Q4G0N8 1177 aa16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 NBPF11Q86T75 865 aa16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
CDC42EP1-204ENST00000434728 MYH13Q9UKX3 1938 aa16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 IFIT1P09914 478 aaKnown RBP16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 HDLBPQ00341 1268 aaKnown RBP16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 LRRC24Q50LG9 513 aa16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 FBXO33Q7Z6M2 555 aa16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 BRI3BPQ8WY22 251 aa16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 TEPSINQ96N21 525 aa16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 WRNIP1Q96S55 665 aa16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 AK9Q5TCS8 1911 aa16.8■□□□□ 0.28
CDC42EP1-204ENST00000434728 RBBP6Q7Z6E9 1792 aaKnown RBP16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 PDE8BO95263 885 aa16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 CETPP11597 493 aa16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 SLC4A8Q2Y0W8 1093 aa16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 DCAF15Q66K64 600 aa16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 MS4A4AQ96JQ5 239 aa16.79■□□□□ 0.28
CDC42EP1-204ENST00000434728 UTYO14607 1347 aa16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 BCAMP50895 628 aa16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 GRIK5Q16478 980 aa16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 RABL6Q3YEC7 729 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 ERO1BQ86YB8 467 aa16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 ARMC5Q96C12 935 aa16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 MKI67P46013 3256 aaKnown RBP16.78■□□□□ 0.28
CDC42EP1-204ENST00000434728 PTPRCP08575 1304 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 SPDYE5A6NIY4 337 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 MYCP01106 439 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 SLC5A1P13866 664 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 MIER1Q8N108 512 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 FAM43AQ8N2R8 423 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 ANKRD44Q8N8A2 993 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 ZDHHC15Q96MV8 337 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 SUGT1Q9Y2Z0 365 aa16.77■□□□□ 0.28
CDC42EP1-204ENST00000434728 EN2P19622 333 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP1-204ENST00000434728 FAM83AQ86UY5 434 aa16.76■□□□□ 0.27
CDC42EP1-204ENST00000434728 ZKSCAN4Q969J2 545 aaPredicted RBP16.76■□□□□ 0.27
CDC42EP1-204ENST00000434728 PTCH2Q9Y6C5 1203 aa16.76■□□□□ 0.27
CDC42EP1-204ENST00000434728 FKBP1CQ5VVH2 108 aa16.75■□□□□ 0.27
CDC42EP1-204ENST00000434728 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
CDC42EP1-204ENST00000434728 WDR66Q8TBY9 1149 aa16.75■□□□□ 0.27
CDC42EP1-204ENST00000434728 ZNF333Q96JL9 665 aa16.75■□□□□ 0.27
CDC42EP1-204ENST00000434728 ZNF341Q9BYN7 854 aa16.75■□□□□ 0.27
CDC42EP1-204ENST00000434728 SNCAIPQ9Y6H5 919 aa16.75■□□□□ 0.27
CDC42EP1-204ENST00000434728 KIF16BQ96L93 1317 aa16.74■□□□□ 0.27
CDC42EP1-204ENST00000434728 TLR2O60603 784 aa16.74■□□□□ 0.27
CDC42EP1-204ENST00000434728 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP1-204ENST00000434728 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
CDC42EP1-204ENST00000434728 PPIL2Q13356 520 aa16.74■□□□□ 0.27
CDC42EP1-204ENST00000434728 VGLL2Q8N8G2 317 aa16.74■□□□□ 0.27
CDC42EP1-204ENST00000434728 MRIQ9BWK5 157 aa16.74■□□□□ 0.27
CDC42EP1-204ENST00000434728 BTBD19C9JJ37 291 aa16.73■□□□□ 0.27
CDC42EP1-204ENST00000434728 IRF6O14896 467 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms