RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 SREBF2Q12772 1141 aa12□□□□□ -0.49
RFC4-207ENST00000433496 ATP2B3Q16720 1220 aa12□□□□□ -0.49
RFC4-207ENST00000433496 TEKT1Q969V4 418 aa12□□□□□ -0.49
RFC4-207ENST00000433496 ABHD8Q96I13 439 aa12□□□□□ -0.49
RFC4-207ENST00000433496 PRMT6Q96LA8 375 aaPredicted RBP12□□□□□ -0.49
RFC4-207ENST00000433496 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
RFC4-207ENST00000433496 RNF186Q9NXI6 227 aa12□□□□□ -0.49
RFC4-207ENST00000433496 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
RFC4-207ENST00000433496 PCDHAC2Q9Y5I4 1007 aa12□□□□□ -0.49
RFC4-207ENST00000433496 LAMB1P07942 1786 aa12□□□□□ -0.49
RFC4-207ENST00000433496 IL15P40933 162 aaPredicted RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 IREB2P48200 963 aaKnown RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 RFX5P48382 616 aaPredicted RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
RFC4-207ENST00000433496 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 DZIP1LQ8IYY4 767 aaKnown RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 MIER1Q8N108 512 aa11.99□□□□□ -0.49
RFC4-207ENST00000433496 CSRNP1Q96S65 589 aa11.99□□□□□ -0.49
RFC4-207ENST00000433496 MEIS3Q99687 375 aa11.99□□□□□ -0.49
RFC4-207ENST00000433496 TDRD3Q9H7E2 651 aaKnown RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 ZNF70Q9UC06 446 aaPredicted RBP11.99□□□□□ -0.49
RFC4-207ENST00000433496 FGFR2P21802 821 aa11.98□□□□□ -0.49
RFC4-207ENST00000433496 HDLBPQ00341 1268 aaKnown RBP11.98□□□□□ -0.49
RFC4-207ENST00000433496 DGKZQ13574 1117 aa11.98□□□□□ -0.49
RFC4-207ENST00000433496 RASA3Q14644 834 aa11.98□□□□□ -0.49
RFC4-207ENST00000433496 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
RFC4-207ENST00000433496 WDR66Q8TBY9 1149 aa11.98□□□□□ -0.49
RFC4-207ENST00000433496 SLC10A4Q96EP9 437 aa11.98□□□□□ -0.49
RFC4-207ENST00000433496 SUGT1Q9Y2Z0 365 aa11.98□□□□□ -0.49
RFC4-207ENST00000433496 SSC5DA1L4H1 1573 aa11.97□□□□□ -0.49
RFC4-207ENST00000433496 TCP10L2B9ZVM9 353 aa11.97□□□□□ -0.49
RFC4-207ENST00000433496 SRGAP3O43295 1099 aa11.97□□□□□ -0.49
RFC4-207ENST00000433496 TRIM27P14373 513 aa11.97□□□□□ -0.49
RFC4-207ENST00000433496 ATG9AQ7Z3C6 839 aa11.97□□□□□ -0.49
RFC4-207ENST00000433496 MYH2Q9UKX2 1941 aa11.97□□□□□ -0.49
RFC4-207ENST00000433496 UNCXA6NJT0 531 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 CCDC85CA6NKD9 419 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 SEMA3EO15041 775 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 BCAR3O75815 825 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 GNAI2P04899 355 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 MAP3K11Q16584 847 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 LDLRAD1Q5T700 205 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 NBPF12Q5TAG4 269 aaPredicted RBP11.96□□□□□ -0.49
RFC4-207ENST00000433496 SPRYD7Q5W111 196 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 FTSJ3Q8IY81 847 aaKnown RBP11.96□□□□□ -0.49
RFC4-207ENST00000433496 ANKRD13AQ8IZ07 590 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 CLUAP1Q96AJ1 413 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 HOOK2Q96ED9 719 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 COPRSQ9NQ92 184 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 PA2G4Q9UQ80 394 aaKnown RBP11.96□□□□□ -0.49
RFC4-207ENST00000433496 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.49
RFC4-207ENST00000433496 AOX1Q06278 1338 aa11.95□□□□□ -0.5
RFC4-207ENST00000433496 MANSC4A6NHS7 340 aaPredicted RBP11.95□□□□□ -0.5
RFC4-207ENST00000433496 ALDH1A1P00352 501 aa11.95□□□□□ -0.5
RFC4-207ENST00000433496 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
RFC4-207ENST00000433496 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
RFC4-207ENST00000433496 DENND2AQ9ULE3 1009 aa11.95□□□□□ -0.5
RFC4-207ENST00000433496 FZD1Q9UP38 647 aa11.95□□□□□ -0.5
RFC4-207ENST00000433496 ZBTB22O15209 634 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 LDHBP07195 334 aaKnown RBP11.94□□□□□ -0.5
RFC4-207ENST00000433496 TM4SF4P48230 202 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 INHBEP58166 350 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 GRIK5Q16478 980 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 OTUD7BQ6GQQ9 843 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 HHIPL2Q6UWX4 724 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 ZGPATQ8N5A5 531 aaKnown RBP11.94□□□□□ -0.5
RFC4-207ENST00000433496 WNK4Q96J92 1243 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 CLMNQ96JQ2 1002 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 MRIQ9BWK5 157 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 RNF39Q9H2S5 420 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 CSADQ9Y600 493 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 DOCK2Q92608 1830 aa11.94□□□□□ -0.5
RFC4-207ENST00000433496 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
RFC4-207ENST00000433496 CACNB3P54284 484 aa11.93□□□□□ -0.5
RFC4-207ENST00000433496 MTX1Q13505 466 aa11.93□□□□□ -0.5
RFC4-207ENST00000433496 MVPQ14764 893 aaKnown RBP11.93□□□□□ -0.5
RFC4-207ENST00000433496 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
RFC4-207ENST00000433496 CTU1Q7Z7A3 348 aaKnown RBP11.93□□□□□ -0.5
RFC4-207ENST00000433496 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 SALL1Q9NSC2 1324 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 USP2O75604 605 aaPredicted RBP11.92□□□□□ -0.5
RFC4-207ENST00000433496 PHKA1P46020 1223 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 TFCP2Q12800 502 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.5
RFC4-207ENST00000433496 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
RFC4-207ENST00000433496 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 DCAF15Q66K64 600 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 CCDC102BQ68D86 513 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 FAM83AQ86UY5 434 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 DZIP1Q86YF9 867 aaKnown RBP11.92□□□□□ -0.5
RFC4-207ENST00000433496 ITPRIPQ8IWB1 547 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 SLF2Q8IX21 1173 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 NEUROD6Q96NK8 337 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 ELP3Q9H9T3 547 aa11.92□□□□□ -0.5
RFC4-207ENST00000433496 RPAP1Q9BWH6 1393 aaPredicted RBP11.92□□□□□ -0.5
RFC4-207ENST00000433496 A0A1B0GUL7 405 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms