RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 MECOMQ03112 1051 aa31.86■■■□□ 2.69
TMEM248-205ENST00000433271 OSBP2Q969R2 916 aa31.86■■■□□ 2.69
TMEM248-205ENST00000433271 NSUN4Q96CB9 384 aaKnown RBP31.86■■■□□ 2.69
TMEM248-205ENST00000433271 SEC62Q99442 399 aaKnown RBP31.86■■■□□ 2.69
TMEM248-205ENST00000433271 SCN9AQ15858 1988 aa31.86■■■□□ 2.69
TMEM248-205ENST00000433271 GRIK5Q16478 980 aa31.85■■■□□ 2.69
TMEM248-205ENST00000433271 DACT2Q5SW24 774 aa31.85■■■□□ 2.69
TMEM248-205ENST00000433271 NAA16Q6N069 864 aaPredicted RBP31.85■■■□□ 2.69
TMEM248-205ENST00000433271 DZIP1Q86YF9 867 aaKnown RBP31.85■■■□□ 2.69
TMEM248-205ENST00000433271 ZNF384Q8TF68 577 aa31.85■■■□□ 2.69
TMEM248-205ENST00000433271 CERS5Q8N5B7 392 aa31.84■■■□□ 2.69
TMEM248-205ENST00000433271 UPF2Q9HAU5 1272 aaKnown RBP31.84■■■□□ 2.69
TMEM248-205ENST00000433271 CYP7A1P22680 504 aa31.83■■■□□ 2.69
TMEM248-205ENST00000433271 PRELPP51888 382 aa31.83■■■□□ 2.69
TMEM248-205ENST00000433271 PUS7LQ9H0K6 701 aaKnown RBP31.83■■■□□ 2.69
TMEM248-205ENST00000433271 MAST3O60307 1309 aa31.83■■■□□ 2.69
TMEM248-205ENST00000433271 KIAA1211Q6ZU35 1233 aa31.82■■■□□ 2.69
TMEM248-205ENST00000433271 ZNF589Q86UQ0 364 aaPredicted RBP31.82■■■□□ 2.69
TMEM248-205ENST00000433271 M0R2C6 588 aa31.82■■■□□ 2.68
TMEM248-205ENST00000433271 GSTO1P78417 241 aa31.82■■■□□ 2.68
TMEM248-205ENST00000433271 ANO2Q9NQ90 1003 aa31.82■■■□□ 2.68
TMEM248-205ENST00000433271 CCDC88AQ3V6T2 1871 aa31.81■■■□□ 2.68
TMEM248-205ENST00000433271 CCDC171Q6TFL3 1326 aa31.81■■■□□ 2.68
TMEM248-205ENST00000433271 MXD3Q9BW11 206 aa31.81■■■□□ 2.68
TMEM248-205ENST00000433271 LMNB1P20700 586 aa31.8■■■□□ 2.68
TMEM248-205ENST00000433271 RAD17O75943 681 aa31.79■■■□□ 2.68
TMEM248-205ENST00000433271 CCDC129Q6ZRS4 1044 aa31.79■■■□□ 2.68
TMEM248-205ENST00000433271 ADGRA1Q86SQ6 560 aa31.79■■■□□ 2.68
TMEM248-205ENST00000433271 USP26Q9BXU7 913 aa31.79■■■□□ 2.68
TMEM248-205ENST00000433271 MAST2Q6P0Q8 1798 aa31.79■■■□□ 2.68
TMEM248-205ENST00000433271 EPB41L2O43491 1005 aaKnown RBP31.78■■■□□ 2.68
TMEM248-205ENST00000433271 VIL1P09327 827 aaKnown RBP31.78■■■□□ 2.68
TMEM248-205ENST00000433271 LSG1Q9H089 658 aaKnown RBP31.78■■■□□ 2.68
TMEM248-205ENST00000433271 LDHCP07864 332 aa31.78■■■□□ 2.68
TMEM248-205ENST00000433271 SLF2Q8IX21 1173 aa31.78■■■□□ 2.68
TMEM248-205ENST00000433271 AIDAQ96BJ3 306 aa31.78■■■□□ 2.68
TMEM248-205ENST00000433271 ZNF646O15015 1829 aaPredicted RBP31.78■■■□□ 2.68
TMEM248-205ENST00000433271 PSME4Q14997 1843 aa31.78■■■□□ 2.68
TMEM248-205ENST00000433271 PSMD14O00487 310 aa31.77■■■□□ 2.68
TMEM248-205ENST00000433271 GPAA1O43292 621 aa31.77■■■□□ 2.68
TMEM248-205ENST00000433271 CXCL9Q07325 125 aa31.77■■■□□ 2.68
TMEM248-205ENST00000433271 GPR162Q16538 588 aa31.77■■■□□ 2.68
TMEM248-205ENST00000433271 MYO3BQ8WXR4 1341 aa31.76■■■□□ 2.68
TMEM248-205ENST00000433271 FAM163AQ96GL9 167 aaPredicted RBP31.76■■■□□ 2.67
TMEM248-205ENST00000433271 TTF2Q9UNY4 1162 aaKnown RBP31.76■■■□□ 2.67
TMEM248-205ENST00000433271 FZD9O00144 591 aa31.75■■■□□ 2.67
TMEM248-205ENST00000433271 DIXDC1Q155Q3 683 aa31.75■■■□□ 2.67
TMEM248-205ENST00000433271 RSBN1LQ6PCB5 846 aaPredicted RBP31.75■■■□□ 2.67
TMEM248-205ENST00000433271 CIAPIN1Q6FI81 312 aa31.75■■■□□ 2.67
TMEM248-205ENST00000433271 MIGA1Q8NAN2 632 aa31.75■■■□□ 2.67
TMEM248-205ENST00000433271 STRBPQ96SI9 672 aaKnown RBP31.75■■■□□ 2.67
TMEM248-205ENST00000433271 MAGEB6P1A0A0J9YX57 407 aa31.74■■■□□ 2.67
TMEM248-205ENST00000433271 MBD4O95243 580 aa31.74■■■□□ 2.67
TMEM248-205ENST00000433271 PTH1RQ03431 593 aa31.74■■■□□ 2.67
TMEM248-205ENST00000433271 TNIP1Q15025 636 aa31.74■■■□□ 2.67
TMEM248-205ENST00000433271 MROH7-TTC4A0A0A0MT08 1334 aa31.73■■■□□ 2.67
TMEM248-205ENST00000433271 F8W031 263 aaPredicted RBP31.73■■■□□ 2.67
TMEM248-205ENST00000433271 GRIN3BO60391 1043 aa31.73■■■□□ 2.67
TMEM248-205ENST00000433271 MAP4K1Q92918 833 aa31.73■■■□□ 2.67
TMEM248-205ENST00000433271 RIOK1Q9BRS2 568 aaKnown RBP31.73■■■□□ 2.67
TMEM248-205ENST00000433271 MRIQ9BWK5 157 aa31.73■■■□□ 2.67
TMEM248-205ENST00000433271 C22orf23Q9BZE7 217 aa31.73■■■□□ 2.67
TMEM248-205ENST00000433271 KIAA0825Q8IV33 1275 aa31.72■■■□□ 2.67
TMEM248-205ENST00000433271 TSHZ2Q9NRE2 1034 aa31.72■■■□□ 2.67
TMEM248-205ENST00000433271 HSPD1P10809 573 aaKnown RBP31.71■■■□□ 2.67
TMEM248-205ENST00000433271 EIF6P56537 245 aaKnown RBP31.71■■■□□ 2.67
TMEM248-205ENST00000433271 GMLQ99445 158 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 DSCC1Q9BVC3 393 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 ARMT1Q9H993 441 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 SBF1O95248 1867 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 GAKO14976 1311 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 HDLBPQ00341 1268 aaKnown RBP31.71■■■□□ 2.67
TMEM248-205ENST00000433271 VPS53Q5VIR6 699 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 LCORLQ8N3X6 602 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 AGBL3Q8NEM8 1001 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 TBC1D32Q96NH3 1257 aa31.71■■■□□ 2.67
TMEM248-205ENST00000433271 MYH2Q9UKX2 1941 aa31.7■■■□□ 2.67
TMEM248-205ENST00000433271 DICER1Q9UPY3 1922 aaKnown RBP31.7■■■□□ 2.67
TMEM248-205ENST00000433271 GNAT2P19087 354 aa31.7■■■□□ 2.66
TMEM248-205ENST00000433271 PPP4CP60510 307 aa31.7■■■□□ 2.66
TMEM248-205ENST00000433271 HHIPL2Q6UWX4 724 aa31.7■■■□□ 2.66
TMEM248-205ENST00000433271 GPR75-ASB3A0A0A6YYF3 556 aa31.69■■■□□ 2.66
TMEM248-205ENST00000433271 BAG3O95817 575 aa31.69■■■□□ 2.66
TMEM248-205ENST00000433271 NOL10Q9BSC4 688 aaKnown RBP31.69■■■□□ 2.66
TMEM248-205ENST00000433271 AATFQ9NY61 560 aaKnown RBP eCLIP31.69■■■□□ 2.661e-6■■■■□ 24.3
TMEM248-205ENST00000433271 SCNN1DP51172 638 aa31.68■■■□□ 2.66
TMEM248-205ENST00000433271 DYNLL1P63167 89 aaKnown RBP31.68■■■□□ 2.66
TMEM248-205ENST00000433271 CERS3Q8IU89 383 aa31.68■■■□□ 2.66
TMEM248-205ENST00000433271 TEKT1Q969V4 418 aa31.68■■■□□ 2.66
TMEM248-205ENST00000433271 RBM25P49756 843 aaKnown RBP31.67■■■□□ 2.66
TMEM248-205ENST00000433271 SERPINA10Q9UK55 444 aa31.67■■■□□ 2.66
TMEM248-205ENST00000433271 ZBTB12Q9Y330 459 aaPredicted RBP31.67■■■□□ 2.66
TMEM248-205ENST00000433271 DAGLAQ9Y4D2 1042 aa31.67■■■□□ 2.66
TMEM248-205ENST00000433271 FOXP2O15409 715 aa31.67■■■□□ 2.66
TMEM248-205ENST00000433271 RNF181Q9P0P0 153 aa31.67■■■□□ 2.66
TMEM248-205ENST00000433271 PATL2C9JE40 543 aaKnown RBP31.66■■■□□ 2.66
TMEM248-205ENST00000433271 CRKP46108 304 aa31.66■■■□□ 2.66
TMEM248-205ENST00000433271 RBM8AQ9Y5S9 174 aaKnown RBP31.66■■■□□ 2.66
TMEM248-205ENST00000433271 U3KPZ7 1027 aaPredicted RBP31.66■■■□□ 2.66
TMEM248-205ENST00000433271 MCCP23508 829 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms