RNA–Protein interactions for RNA: ENST00000433028.6

CHEK2-213, Transcript of checkpoint kinase 2, humanhuman

TSL 5

Gene CHEK2, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-213ENST00000433028 TBC1D8O95759 1140 aa16.7■□□□□ 0.26
CHEK2-213ENST00000433028 ZBTB48P10074 688 aaPredicted RBP16.7■□□□□ 0.26
CHEK2-213ENST00000433028 HDLBPQ00341 1268 aaKnown RBP16.7■□□□□ 0.26
CHEK2-213ENST00000433028 PUM3Q15397 648 aaKnown RBP16.7■□□□□ 0.26
CHEK2-213ENST00000433028 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
CHEK2-213ENST00000433028 TDRD3Q9H7E2 651 aaKnown RBP16.7■□□□□ 0.26
CHEK2-213ENST00000433028 IQSEC3Q9UPP2 1182 aaPredicted RBP16.7■□□□□ 0.26
CHEK2-213ENST00000433028 MANSC4A6NHS7 340 aaPredicted RBP16.69■□□□□ 0.26
CHEK2-213ENST00000433028 EYA2O00167 538 aa16.69■□□□□ 0.26
CHEK2-213ENST00000433028 CRKP46108 304 aa16.69■□□□□ 0.26
CHEK2-213ENST00000433028 INHBEP58166 350 aa16.69■□□□□ 0.26
CHEK2-213ENST00000433028 MLLT1Q03111 559 aaPredicted RBP16.69■□□□□ 0.26
CHEK2-213ENST00000433028 GRIK5Q16478 980 aa16.69■□□□□ 0.26
CHEK2-213ENST00000433028 ZNF296Q8WUU4 475 aaPredicted RBP16.69■□□□□ 0.26
CHEK2-213ENST00000433028 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
CHEK2-213ENST00000433028 USP2O75604 605 aaPredicted RBP16.68■□□□□ 0.26
CHEK2-213ENST00000433028 IFIT1P09914 478 aaKnown RBP16.68■□□□□ 0.26
CHEK2-213ENST00000433028 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
CHEK2-213ENST00000433028 BCAMP50895 628 aa16.68■□□□□ 0.26
CHEK2-213ENST00000433028 WNK4Q96J92 1243 aa16.68■□□□□ 0.26
CHEK2-213ENST00000433028 TEPSINQ96N21 525 aa16.68■□□□□ 0.26
CHEK2-213ENST00000433028 MRIQ9BWK5 157 aa16.68■□□□□ 0.26
CHEK2-213ENST00000433028 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
CHEK2-213ENST00000433028 NOB1Q9ULX3 412 aaKnown RBP16.68■□□□□ 0.26
CHEK2-213ENST00000433028 GPR25O00155 361 aa16.67■□□□□ 0.26
CHEK2-213ENST00000433028 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
CHEK2-213ENST00000433028 ALDH1A1P00352 501 aa16.67■□□□□ 0.26
CHEK2-213ENST00000433028 UBTFL1P0CB47 393 aaPredicted RBP16.67■□□□□ 0.26
CHEK2-213ENST00000433028 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
CHEK2-213ENST00000433028 PKN2Q16513 984 aaKnown RBP16.67■□□□□ 0.26
CHEK2-213ENST00000433028 ATG9AQ7Z3C6 839 aa16.67■□□□□ 0.26
CHEK2-213ENST00000433028 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
CHEK2-213ENST00000433028 API5Q9BZZ5 524 aaKnown RBP16.67■□□□□ 0.26
CHEK2-213ENST00000433028 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
CHEK2-213ENST00000433028 PDE4DIPQ5VU43 2346 aa16.66■□□□□ 0.26
CHEK2-213ENST00000433028 LPIN2Q92539 896 aa16.66■□□□□ 0.26
CHEK2-213ENST00000433028 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
CHEK2-213ENST00000433028 ZDHHC15Q96MV8 337 aa16.66■□□□□ 0.26
CHEK2-213ENST00000433028 TNRC18O15417 2968 aaPredicted RBP16.65■□□□□ 0.26
CHEK2-213ENST00000433028 MAST3O60307 1309 aa16.65■□□□□ 0.26
CHEK2-213ENST00000433028 CIAO1O76071 339 aa16.65■□□□□ 0.26
CHEK2-213ENST00000433028 SLC5A1P13866 664 aa16.65■□□□□ 0.26
CHEK2-213ENST00000433028 TNNI2P48788 182 aa16.65■□□□□ 0.26
CHEK2-213ENST00000433028 IFNL1Q8IU54 200 aa16.65■□□□□ 0.26
CHEK2-213ENST00000433028 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
CHEK2-213ENST00000433028 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
CHEK2-213ENST00000433028 RARSP54136 660 aaKnown RBP16.64■□□□□ 0.25
CHEK2-213ENST00000433028 FKBP1CQ5VVH2 108 aa16.64■□□□□ 0.25
CHEK2-213ENST00000433028 CDAN1Q8IWY9 1227 aa16.64■□□□□ 0.25
CHEK2-213ENST00000433028 TMEM39BQ9GZU3 492 aa16.64■□□□□ 0.25
CHEK2-213ENST00000433028 R3HDMLQ9H3Y0 253 aa16.64■□□□□ 0.25
CHEK2-213ENST00000433028 IGF2BP3O00425 579 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHEK2-213ENST00000433028 FKTNO75072 461 aa16.63■□□□□ 0.25
CHEK2-213ENST00000433028 GJA5P36382 358 aa16.63■□□□□ 0.25
CHEK2-213ENST00000433028 HHIPL2Q6UWX4 724 aa16.63■□□□□ 0.25
CHEK2-213ENST00000433028 WDR66Q8TBY9 1149 aa16.63■□□□□ 0.25
CHEK2-213ENST00000433028 ARHGAP45Q92619 1136 aa16.63■□□□□ 0.25
CHEK2-213ENST00000433028 AK9Q5TCS8 1911 aa16.62■□□□□ 0.25
CHEK2-213ENST00000433028 TESPA1A2RU30 521 aaPredicted RBP16.62■□□□□ 0.25
CHEK2-213ENST00000433028 APOBEC3HQ6NTF7 200 aaKnown RBP16.62■□□□□ 0.25
CHEK2-213ENST00000433028 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.62■□□□□ 0.25
CHEK2-213ENST00000433028 FAM83AQ86UY5 434 aa16.62■□□□□ 0.25
CHEK2-213ENST00000433028 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
CHEK2-213ENST00000433028 HPS5Q9UPZ3 1129 aa16.62■□□□□ 0.25
CHEK2-213ENST00000433028 LRRFIP2Q9Y608 721 aaKnown RBP16.62■□□□□ 0.25
CHEK2-213ENST00000433028 HTTP42858 3142 aa16.62■□□□□ 0.25
CHEK2-213ENST00000433028 MYH2Q9UKX2 1941 aa16.61■□□□□ 0.25
CHEK2-213ENST00000433028 ZBTB22O15209 634 aa16.61■□□□□ 0.25
CHEK2-213ENST00000433028 IL15P40933 162 aaPredicted RBP16.61■□□□□ 0.25
CHEK2-213ENST00000433028 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
CHEK2-213ENST00000433028 ATP2B3Q16720 1220 aa16.61■□□□□ 0.25
CHEK2-213ENST00000433028 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
CHEK2-213ENST00000433028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.61■□□□□ 0.25
CHEK2-213ENST00000433028 MEIS3Q99687 375 aa16.61■□□□□ 0.25
CHEK2-213ENST00000433028 SIL1Q9H173 461 aa16.61■□□□□ 0.25
CHEK2-213ENST00000433028 COPRSQ9NQ92 184 aa16.61■□□□□ 0.25
CHEK2-213ENST00000433028 TMOD2Q9NZR1 351 aa16.61■□□□□ 0.25
CHEK2-213ENST00000433028 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.61■□□□□ 0.25
CHEK2-213ENST00000433028 RPAP1Q9BWH6 1393 aaPredicted RBP16.61■□□□□ 0.25
CHEK2-213ENST00000433028 CACNB3P54284 484 aa16.6■□□□□ 0.25
CHEK2-213ENST00000433028 MAP3K9P80192 1104 aa16.6■□□□□ 0.25
CHEK2-213ENST00000433028 OTUD7BQ6GQQ9 843 aa16.6■□□□□ 0.25
CHEK2-213ENST00000433028 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
CHEK2-213ENST00000433028 OPTNQ96CV9 577 aa16.6■□□□□ 0.25
CHEK2-213ENST00000433028 ELP3Q9H9T3 547 aa16.6■□□□□ 0.25
CHEK2-213ENST00000433028 CENPFP49454 3210 aa16.59■□□□□ 0.25
CHEK2-213ENST00000433028 VGLL4Q14135 290 aa16.59■□□□□ 0.25
CHEK2-213ENST00000433028 MS4A4AQ96JQ5 239 aa16.59■□□□□ 0.25
CHEK2-213ENST00000433028 PTPN18Q99952 460 aa16.59■□□□□ 0.25
CHEK2-213ENST00000433028 SALL1Q9NSC2 1324 aa16.58■□□□□ 0.25
CHEK2-213ENST00000433028 SEMA3EO15041 775 aa16.58■□□□□ 0.24
CHEK2-213ENST00000433028 SOX10P56693 466 aa16.58■□□□□ 0.24
CHEK2-213ENST00000433028 HOOK2Q96ED9 719 aa16.58■□□□□ 0.24
CHEK2-213ENST00000433028 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
CHEK2-213ENST00000433028 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.24
CHEK2-213ENST00000433028 CSADQ9Y600 493 aa16.58■□□□□ 0.24
CHEK2-213ENST00000433028 GNAI3P08754 354 aa16.57■□□□□ 0.24
CHEK2-213ENST00000433028 CRHR2Q13324 411 aa16.57■□□□□ 0.24
CHEK2-213ENST00000433028 MTX1Q13505 466 aa16.57■□□□□ 0.24
CHEK2-213ENST00000433028 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms