RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 VPS37DQ86XT2 251 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 TBC1D22AQ8WUA7 517 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 ARMC5Q96C12 935 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 MS4A4AQ96JQ5 239 aa22.14■■□□□ 1.13
CNOT9-204ENST00000432877 UTYO14607 1347 aa22.13■■□□□ 1.13
CNOT9-204ENST00000432877 CAVIN4Q5BKX8 364 aa22.13■■□□□ 1.13
CNOT9-204ENST00000432877 CD99L2Q8TCZ2 262 aa22.13■■□□□ 1.13
CNOT9-204ENST00000432877 ELP3Q9H9T3 547 aa22.13■■□□□ 1.13
CNOT9-204ENST00000432877 SPINK5Q9NQ38 1064 aaPredicted RBP22.13■■□□□ 1.13
CNOT9-204ENST00000432877 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.12■■□□□ 1.13
CNOT9-204ENST00000432877 KAZALD1Q96I82 304 aa22.12■■□□□ 1.13
CNOT9-204ENST00000432877 SUCLG2Q96I99 432 aa22.12■■□□□ 1.13
CNOT9-204ENST00000432877 PUS3Q9BZE2 481 aaKnown RBP22.12■■□□□ 1.13
CNOT9-204ENST00000432877 ZFYVE28Q9HCC9 887 aa22.12■■□□□ 1.13
CNOT9-204ENST00000432877 CSADQ9Y600 493 aa22.12■■□□□ 1.13
CNOT9-204ENST00000432877 TCP10L2B9ZVM9 353 aa22.11■■□□□ 1.13
CNOT9-204ENST00000432877 WDHD1O75717 1129 aaPredicted RBP22.11■■□□□ 1.13
CNOT9-204ENST00000432877 HOOK2Q96ED9 719 aa22.11■■□□□ 1.13
CNOT9-204ENST00000432877 RABL6Q3YEC7 729 aaPredicted RBP22.1■■□□□ 1.13
CNOT9-204ENST00000432877 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.1■■□□□ 1.13
CNOT9-204ENST00000432877 TMEM39BQ9GZU3 492 aa22.1■■□□□ 1.13
CNOT9-204ENST00000432877 SUGT1Q9Y2Z0 365 aa22.1■■□□□ 1.13
CNOT9-204ENST00000432877 POTEFA5A3E0 1075 aa22.09■■□□□ 1.13
CNOT9-204ENST00000432877 FRAT2O75474 233 aaPredicted RBP22.09■■□□□ 1.13
CNOT9-204ENST00000432877 NBPF7P0C2Y1 421 aaPredicted RBP22.09■■□□□ 1.13
CNOT9-204ENST00000432877 FKBP1CQ5VVH2 108 aa22.09■■□□□ 1.13
CNOT9-204ENST00000432877 TEKT1Q969V4 418 aa22.09■■□□□ 1.13
CNOT9-204ENST00000432877 CCL15-CCL14A0A0B4J2E2 113 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 PDE8BO95263 885 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 VGLL4Q14135 290 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 CCL15Q16663 113 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 METTL24Q5JXM2 366 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 NBPF11Q86T75 865 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 FAM83AQ86UY5 434 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 BRI3BPQ8WY22 251 aa22.08■■□□□ 1.13
CNOT9-204ENST00000432877 ZCCHC17Q9NP64 241 aaKnown RBP22.08■■□□□ 1.13
CNOT9-204ENST00000432877 TAF1CQ15572 869 aaPredicted RBP22.07■■□□□ 1.12
CNOT9-204ENST00000432877 ZDHHC15Q96MV8 337 aa22.07■■□□□ 1.12
CNOT9-204ENST00000432877 TMEM106CQ9BVX2 250 aa22.07■■□□□ 1.12
CNOT9-204ENST00000432877 BICC1Q9H694 974 aaKnown RBP22.07■■□□□ 1.12
CNOT9-204ENST00000432877 TMOD2Q9NZR1 351 aa22.07■■□□□ 1.12
CNOT9-204ENST00000432877 ECM29Q5VYK3 1845 aa22.07■■□□□ 1.12
CNOT9-204ENST00000432877 MAST3O60307 1309 aa22.06■■□□□ 1.12
CNOT9-204ENST00000432877 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
CNOT9-204ENST00000432877 CHAF1AQ13111 956 aaPredicted RBP22.06■■□□□ 1.12
CNOT9-204ENST00000432877 ERO1BQ86YB8 467 aa22.06■■□□□ 1.12
CNOT9-204ENST00000432877 SPDYE5A6NIY4 337 aa22.05■■□□□ 1.12
CNOT9-204ENST00000432877 CETPP11597 493 aa22.05■■□□□ 1.12
CNOT9-204ENST00000432877 LRRC24Q50LG9 513 aa22.05■■□□□ 1.12
CNOT9-204ENST00000432877 CDAN1Q8IWY9 1227 aa22.05■■□□□ 1.12
CNOT9-204ENST00000432877 VGLL2Q8N8G2 317 aa22.05■■□□□ 1.12
CNOT9-204ENST00000432877 GRIK5Q16478 980 aa22.04■■□□□ 1.12
CNOT9-204ENST00000432877 HHIPL2Q6UWX4 724 aa22.04■■□□□ 1.12
CNOT9-204ENST00000432877 ANKRD44Q8N8A2 993 aa22.04■■□□□ 1.12
CNOT9-204ENST00000432877 CNKSR2Q8WXI2 1034 aa22.04■■□□□ 1.12
CNOT9-204ENST00000432877 OTUD5Q96G74 571 aa22.04■■□□□ 1.12
CNOT9-204ENST00000432877 ZNF333Q96JL9 665 aa22.04■■□□□ 1.12
CNOT9-204ENST00000432877 PTPRCP08575 1304 aa22.04■■□□□ 1.12
CNOT9-204ENST00000432877 LAMB1P07942 1786 aa22.03■■□□□ 1.12
CNOT9-204ENST00000432877 TLR2O60603 784 aa22.03■■□□□ 1.12
CNOT9-204ENST00000432877 GNRH1P01148 92 aa22.03■■□□□ 1.12
CNOT9-204ENST00000432877 IFIT1P09914 478 aaKnown RBP22.03■■□□□ 1.12
CNOT9-204ENST00000432877 KIF22Q14807 665 aa22.03■■□□□ 1.12
CNOT9-204ENST00000432877 DCAF15Q66K64 600 aa22.03■■□□□ 1.12
CNOT9-204ENST00000432877 APOBEC3HQ6NTF7 200 aaKnown RBP22.03■■□□□ 1.12
CNOT9-204ENST00000432877 FAM43AQ8N2R8 423 aa22.03■■□□□ 1.12
CNOT9-204ENST00000432877 IQSEC3Q9UPP2 1182 aaPredicted RBP22.03■■□□□ 1.12
CNOT9-204ENST00000432877 EN2P19622 333 aaPredicted RBP22.02■■□□□ 1.12
CNOT9-204ENST00000432877 BCAMP50895 628 aa22.02■■□□□ 1.12
CNOT9-204ENST00000432877 SNAPC2Q13487 334 aa22.02■■□□□ 1.12
CNOT9-204ENST00000432877 PUM3Q15397 648 aaKnown RBP22.02■■□□□ 1.12
CNOT9-204ENST00000432877 SLC9C1Q4G0N8 1177 aa22.02■■□□□ 1.12
CNOT9-204ENST00000432877 MRPL50Q8N5N7 158 aaKnown RBP22.02■■□□□ 1.12
CNOT9-204ENST00000432877 A0A1B0GUL6 1792 aa22.02■■□□□ 1.11
CNOT9-204ENST00000432877 PRMT2P55345 433 aa22.01■■□□□ 1.11
CNOT9-204ENST00000432877 CAP1Q01518 475 aa22.01■■□□□ 1.11
CNOT9-204ENST00000432877 PPIL2Q13356 520 aa22.01■■□□□ 1.11
CNOT9-204ENST00000432877 HABP4Q5JVS0 413 aaKnown RBP22.01■■□□□ 1.11
CNOT9-204ENST00000432877 WDR66Q8TBY9 1149 aa22.01■■□□□ 1.11
CNOT9-204ENST00000432877 WRNIP1Q96S55 665 aa22.01■■□□□ 1.11
CNOT9-204ENST00000432877 SNCAIPQ9Y6H5 919 aa22.01■■□□□ 1.11
CNOT9-204ENST00000432877 HTTP42858 3142 aa22.01■■□□□ 1.11
CNOT9-204ENST00000432877 FGFR2P21802 821 aa22■■□□□ 1.11
CNOT9-204ENST00000432877 PPATQ06203 517 aa22■■□□□ 1.11
CNOT9-204ENST00000432877 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
CNOT9-204ENST00000432877 BTBD19C9JJ37 291 aa21.99■■□□□ 1.11
CNOT9-204ENST00000432877 CACNB3P54284 484 aa21.99■■□□□ 1.11
CNOT9-204ENST00000432877 ZNF341Q9BYN7 854 aa21.99■■□□□ 1.11
CNOT9-204ENST00000432877 USP44Q9H0E7 712 aa21.99■■□□□ 1.11
CNOT9-204ENST00000432877 PTCH2Q9Y6C5 1203 aa21.99■■□□□ 1.11
CNOT9-204ENST00000432877 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
CNOT9-204ENST00000432877 RPAP1Q9BWH6 1393 aaPredicted RBP21.99■■□□□ 1.11
CNOT9-204ENST00000432877 IRF6O14896 467 aa21.98■■□□□ 1.11
CNOT9-204ENST00000432877 SLC4A8Q2Y0W8 1093 aa21.98■■□□□ 1.11
CNOT9-204ENST00000432877 LPIN2Q92539 896 aa21.98■■□□□ 1.11
CNOT9-204ENST00000432877 ZKSCAN4Q969J2 545 aaPredicted RBP21.98■■□□□ 1.11
CNOT9-204ENST00000432877 SLC5A1P13866 664 aa21.97■■□□□ 1.11
CNOT9-204ENST00000432877 LACTBP83111 547 aaPredicted RBP21.97■■□□□ 1.11
CNOT9-204ENST00000432877 FAM151AQ8WW52 585 aa21.97■■□□□ 1.11
CNOT9-204ENST00000432877 EYA2O00167 538 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms