RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SUPT20HL1Q3ZLR7 823 aa10.58□□□□□ -0.72
CDH13-203ENST00000431540 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
CDH13-203ENST00000431540 FBXO46Q6PJ61 603 aaPredicted RBP10.58□□□□□ -0.72
CDH13-203ENST00000431540 GCC1Q96CN9 775 aa10.58□□□□□ -0.72
CDH13-203ENST00000431540 GREM2Q9H772 168 aa10.58□□□□□ -0.72
CDH13-203ENST00000431540 RBBP6Q7Z6E9 1792 aaKnown RBP10.57□□□□□ -0.72
CDH13-203ENST00000431540 ELL2O00472 640 aaPredicted RBP10.57□□□□□ -0.72
CDH13-203ENST00000431540 MYO1BO43795 1136 aa10.57□□□□□ -0.72
CDH13-203ENST00000431540 FKTNO75072 461 aa10.57□□□□□ -0.72
CDH13-203ENST00000431540 IL1R1P14778 569 aa10.57□□□□□ -0.72
CDH13-203ENST00000431540 PRPF38BQ5VTL8 546 aaKnown RBP10.57□□□□□ -0.72
CDH13-203ENST00000431540 DLK2Q6UY11 383 aa10.57□□□□□ -0.72
CDH13-203ENST00000431540 SPOCK2Q92563 424 aa10.57□□□□□ -0.72
CDH13-203ENST00000431540 PCDHGA4Q9Y5G9 962 aa10.57□□□□□ -0.72
CDH13-203ENST00000431540 ANKRD18BA2A2Z9 1011 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 ITGA6P23229 1130 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 CASP7P55210 303 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 ARHGEF6Q15052 776 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 TWISTNBQ3B726 338 aaPredicted RBP10.56□□□□□ -0.72
CDH13-203ENST00000431540 SPRYD7Q5W111 196 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 WDR63Q8IWG1 891 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 ZNF296Q8WUU4 475 aaPredicted RBP10.56□□□□□ -0.72
CDH13-203ENST00000431540 SLC10A4Q96EP9 437 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 CD209Q9NNX6 404 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 HPS5Q9UPZ3 1129 aa10.56□□□□□ -0.72
CDH13-203ENST00000431540 ASTN2O75129 1339 aaPredicted RBP10.56□□□□□ -0.72
CDH13-203ENST00000431540 KIAA0100Q14667 2235 aaKnown RBP10.56□□□□□ -0.72
CDH13-203ENST00000431540 UBE2Q2LH0YL09 131 aa10.55□□□□□ -0.72
CDH13-203ENST00000431540 SASH1O94885 1247 aa10.55□□□□□ -0.72
CDH13-203ENST00000431540 TTLL12Q14166 644 aaPredicted RBP10.55□□□□□ -0.72
CDH13-203ENST00000431540 DLGAP5Q15398 846 aa10.55□□□□□ -0.72
CDH13-203ENST00000431540 UBE3BQ7Z3V4 1068 aa10.55□□□□□ -0.72
CDH13-203ENST00000431540 TSPYL6Q8N831 410 aa10.55□□□□□ -0.72
CDH13-203ENST00000431540 DNAAF4Q8WXU2 420 aa10.55□□□□□ -0.72
CDH13-203ENST00000431540 MRIQ9BWK5 157 aa10.55□□□□□ -0.72
CDH13-203ENST00000431540 A0A1B0GUL6 1792 aa10.54□□□□□ -0.72
CDH13-203ENST00000431540 TESPA1A2RU30 521 aaPredicted RBP10.54□□□□□ -0.72
CDH13-203ENST00000431540 PTPN12Q05209 780 aaKnown RBP10.54□□□□□ -0.72
CDH13-203ENST00000431540 CHRNDQ07001 517 aa10.54□□□□□ -0.72
CDH13-203ENST00000431540 FLIIQ13045 1269 aa10.54□□□□□ -0.72
CDH13-203ENST00000431540 IFIT5Q13325 482 aaKnown RBP10.54□□□□□ -0.72
CDH13-203ENST00000431540 TNFAIP1Q13829 316 aa10.54□□□□□ -0.72
CDH13-203ENST00000431540 ZNF804AQ7Z570 1209 aa10.54□□□□□ -0.72
CDH13-203ENST00000431540 DEFB129Q9H1M3 183 aa10.54□□□□□ -0.72
CDH13-203ENST00000431540 IRS2Q9Y4H2 1338 aa10.54□□□□□ -0.72
CDH13-203ENST00000431540 KCNJ4P48050 445 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 IREB2P48200 963 aaKnown RBP10.53□□□□□ -0.72
CDH13-203ENST00000431540 GTF2IP78347 998 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 HDLBPQ00341 1268 aaKnown RBP10.53□□□□□ -0.72
CDH13-203ENST00000431540 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 CWF19L2Q2TBE0 894 aaKnown RBP10.53□□□□□ -0.72
CDH13-203ENST00000431540 DMRTA1Q5VZB9 504 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 TXNRD3Q86VQ6 643 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 ANKRD13AQ8IZ07 590 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 ERO1AQ96HE7 468 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 SERPINA10Q9UK55 444 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 FAM205AQ6ZU69 1335 aa10.53□□□□□ -0.72
CDH13-203ENST00000431540 VAMP4O75379 141 aa10.52□□□□□ -0.73
CDH13-203ENST00000431540 ALDH1L1O75891 902 aa10.52□□□□□ -0.73
CDH13-203ENST00000431540 TBC1D8O95759 1140 aa10.52□□□□□ -0.73
CDH13-203ENST00000431540 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
CDH13-203ENST00000431540 KIAA0825Q8IV33 1275 aa10.52□□□□□ -0.73
CDH13-203ENST00000431540 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
CDH13-203ENST00000431540 ZCCHC17Q9NP64 241 aaKnown RBP10.52□□□□□ -0.73
CDH13-203ENST00000431540 ANGEL1Q9UNK9 670 aaKnown RBP10.52□□□□□ -0.73
CDH13-203ENST00000431540 GNRH1P01148 92 aa10.51□□□□□ -0.73
CDH13-203ENST00000431540 CAPN2P17655 700 aa10.51□□□□□ -0.73
CDH13-203ENST00000431540 FOXO4P98177 505 aa10.51□□□□□ -0.73
CDH13-203ENST00000431540 CCDC57Q2TAC2 916 aa10.51□□□□□ -0.73
CDH13-203ENST00000431540 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
CDH13-203ENST00000431540 ZNF428Q96B54 188 aa10.51□□□□□ -0.73
CDH13-203ENST00000431540 HOOK2Q96ED9 719 aa10.51□□□□□ -0.73
CDH13-203ENST00000431540 C2orf72A6NCS6 295 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 WTIPA6NIX2 430 aaPredicted RBP10.5□□□□□ -0.73
CDH13-203ENST00000431540 WDHD1O75717 1129 aaPredicted RBP10.5□□□□□ -0.73
CDH13-203ENST00000431540 PSEN2P49810 448 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 SOX10P56693 466 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 BEND3Q5T5X7 828 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 FKBP1CQ5VVH2 108 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 LDHAL6AQ6ZMR3 332 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 MOB2Q70IA6 237 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 G2E3Q7L622 706 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 TDRD7Q8NHU6 1098 aaKnown RBP10.5□□□□□ -0.73
CDH13-203ENST00000431540 WNK4Q96J92 1243 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 SUGT1Q9Y2Z0 365 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 ARAP2Q8WZ64 1704 aa10.5□□□□□ -0.73
CDH13-203ENST00000431540 USP2O75604 605 aaPredicted RBP10.49□□□□□ -0.73
CDH13-203ENST00000431540 TNNI2P48788 182 aa10.49□□□□□ -0.73
CDH13-203ENST00000431540 CFAP100Q494V2 611 aa10.49□□□□□ -0.73
CDH13-203ENST00000431540 PRAMEF18Q5VWM3 479 aa10.49□□□□□ -0.73
CDH13-203ENST00000431540 NBPF11Q86T75 865 aa10.49□□□□□ -0.73
CDH13-203ENST00000431540 TBC1D22AQ8WUA7 517 aa10.49□□□□□ -0.73
CDH13-203ENST00000431540 ARMC5Q96C12 935 aa10.49□□□□□ -0.73
CDH13-203ENST00000431540 PRMT6Q96LA8 375 aaPredicted RBP10.49□□□□□ -0.73
CDH13-203ENST00000431540 PTPN22Q9Y2R2 807 aa10.49□□□□□ -0.73
CDH13-203ENST00000431540 GRM8O00222 908 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 PTPN5P54829 565 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 PRMT2P55345 433 aa10.48□□□□□ -0.73
CDH13-203ENST00000431540 SP3Q02447 781 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms