RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.19□□□□□ -0.3
RIMKLA-202ENST00000431473 PCK1P35558 622 aa13.19□□□□□ -0.3
RIMKLA-202ENST00000431473 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
RIMKLA-202ENST00000431473 NDUFAB1O14561 156 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 ATP2B3Q16720 1220 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 CEP85Q6P2H3 762 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 MAPK8IP1Q9UQF2 711 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 MAGEB6P1A0A0J9YX57 407 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 UQCRFS1P1P0C7P4 283 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 ATP2A2P16615 1042 aaKnown RBP13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 NDC80O14777 642 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 BRAPQ7Z569 592 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 RTL9Q8NET4 1388 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 ADGRL1O94910 1474 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 ATP8B2P98198 1209 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 VPS16Q9H269 839 aa13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 ERCC5P28715 1186 aaPredicted RBP13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
RIMKLA-202ENST00000431473 KDM5AP29375 1690 aaKnown RBP13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 KRT5P13647 590 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 NAA16Q6N069 864 aaPredicted RBP13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 MYL5Q02045 173 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 SEL1L2Q5TEA6 688 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 WDR66Q8TBY9 1149 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 IFT140Q96RY7 1462 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 CIB2O75838 187 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 CA8P35219 290 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 CCDC26Q8TAB7 109 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 JAKMIP2Q96AA8 810 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 PSMB7Q99436 277 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 C8orf74Q6P047 294 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 LRRC45Q96CN5 670 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 PPANQ9NQ55 473 aaKnown RBP13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 POLR2DO15514 142 aaKnown RBP13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 INPP5BP32019 993 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 GBP1P32455 592 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 MYRIPQ8NFW9 859 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 SYNRGQ9UMZ2 1314 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 PLB1Q6P1J6 1458 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 CYP26C1Q6V0L0 522 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
RIMKLA-202ENST00000431473 WDHD1O75717 1129 aaPredicted RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 LDHCP07864 332 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 IRX5P78411 483 aaPredicted RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 NKIRAS1Q9NYS0 192 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 CHMLP26374 656 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 TMCO4Q5TGY1 634 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 SMARCC2Q8TAQ2 1214 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 NOC4LQ9BVI4 516 aaKnown RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 SLC39A6Q13433 755 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 ZNF174Q15697 407 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 EPSTI1Q96J88 318 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 CCNT1O60563 726 aaKnown RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 CALML3P27482 149 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 CLNS1AP54105 237 aaKnown RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 TFCP2Q12800 502 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 NBPF5PQ86XG9 351 aaPredicted RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 MIPOL1Q8TD10 442 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 IFT74Q96LB3 600 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 FRMD4BQ9Y2L6 1034 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 TNNI2P48788 182 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.16□□□□□ -0.3
RIMKLA-202ENST00000431473 CARD6Q9BX69 1037 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 MTUS1Q9ULD2 1270 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 ARFGAP2Q8N6H7 521 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 TRIM31Q9BZY9 425 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 JAG2Q9Y219 1238 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 TCHPQ9BT92 498 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 GOLGA6BA6NDN3 693 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 ATP5DP30049 168 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 GKAP1Q5VSY0 366 aaPredicted RBP13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 KRT79Q5XKE5 535 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 LMBR1LQ6UX01 489 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 ARHGEF2Q92974 986 aaKnown RBP13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 ZNF131P52739 623 aa13.15□□□□□ -0.3
RIMKLA-202ENST00000431473 IQUBQ8NA54 791 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms