RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 C17orf99Q6UX52 265 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 RAET1EQ8TD07 263 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 CPA4Q9UI42 421 aa12.89□□□□□ -0.35
ATG4B-212ENST00000430617 TEPSINQ96N21 525 aa12.88□□□□□ -0.35
ATG4B-212ENST00000430617 GUCD1Q96NT3 240 aa12.88□□□□□ -0.35
ATG4B-212ENST00000430617 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-212ENST00000430617 RAPGEFL1Q9UHV5 662 aa12.88□□□□□ -0.35
ATG4B-212ENST00000430617 ZMYND8Q9ULU4 1186 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-212ENST00000430617 DNAH12Q6ZR08 3092 aa12.88□□□□□ -0.35
ATG4B-212ENST00000430617 PTPRFP10586 1907 aa12.88□□□□□ -0.35
ATG4B-212ENST00000430617 MYPNQ86TC9 1320 aa12.88□□□□□ -0.35
ATG4B-212ENST00000430617 NEFMP07197 916 aa12.87□□□□□ -0.35
ATG4B-212ENST00000430617 COL9A1P20849 921 aa12.87□□□□□ -0.35
ATG4B-212ENST00000430617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.35
ATG4B-212ENST00000430617 BSDC1Q9NW68 430 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-212ENST00000430617 RPTORQ8N122 1335 aa12.87□□□□□ -0.35
ATG4B-212ENST00000430617 MYO1BO43795 1136 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 PCCAP05165 728 aaPredicted RBP12.86□□□□□ -0.35
ATG4B-212ENST00000430617 SYN1P17600 705 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 RIPK4P57078 832 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 PRKCZQ05513 592 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 NEUROD2Q15784 382 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 C7orf61Q8IZ16 206 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 TRMT2AQ8IZ69 625 aaKnown RBP12.86□□□□□ -0.35
ATG4B-212ENST00000430617 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
ATG4B-212ENST00000430617 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 PAWRQ96IZ0 340 aaKnown RBP12.86□□□□□ -0.35
ATG4B-212ENST00000430617 GABRQQ9UN88 632 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 ADGRA2Q96PE1 1338 aa12.86□□□□□ -0.35
ATG4B-212ENST00000430617 FMNL1O95466 1100 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-212ENST00000430617 TFRCP02786 760 aaKnown RBP12.85□□□□□ -0.35
ATG4B-212ENST00000430617 CETPP11597 493 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 MAGEA10P43363 369 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-212ENST00000430617 UBXN2AP68543 259 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 SLFN5Q08AF3 891 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 LMOD3Q0VAK6 560 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 HDGFL1Q5TGJ6 251 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 CDC5LQ99459 802 aaKnown RBP12.85□□□□□ -0.35
ATG4B-212ENST00000430617 MYD88Q99836 296 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 GREM2Q9H772 168 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
ATG4B-212ENST00000430617 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-212ENST00000430617 BABAM1Q9NWV8 329 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 DBF4Q9UBU7 674 aaPredicted RBP12.85□□□□□ -0.35
ATG4B-212ENST00000430617 IL16Q14005 1332 aa12.85□□□□□ -0.35
ATG4B-212ENST00000430617 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 IRF6O14896 467 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 WDHD1O75717 1129 aaPredicted RBP12.84□□□□□ -0.35
ATG4B-212ENST00000430617 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
ATG4B-212ENST00000430617 HOXD10P28358 340 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 RIC3Q7Z5B4 369 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 TTLL11Q8NHH1 800 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 DEFB118Q96PH6 123 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 LEMD3Q9Y2U8 911 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 CSADQ9Y600 493 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 IRS2Q9Y4H2 1338 aa12.84□□□□□ -0.35
ATG4B-212ENST00000430617 E9PSI1 815 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 SNAP23O00161 211 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 ELNP15502 786 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 RBM5P52756 815 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATG4B-212ENST00000430617 CTSWP56202 376 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 HELBQ8NG08 1087 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-212ENST00000430617 FAM161BQ96MY7 647 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
ATG4B-212ENST00000430617 ZNF70Q9UC06 446 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-212ENST00000430617 JAG2Q9Y219 1238 aa12.83□□□□□ -0.36
ATG4B-212ENST00000430617 COL2A1P02458 1487 aaPredicted RBP12.83□□□□□ -0.36
ATG4B-212ENST00000430617 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
ATG4B-212ENST00000430617 ERO1BQ86YB8 467 aa12.82□□□□□ -0.36
ATG4B-212ENST00000430617 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
ATG4B-212ENST00000430617 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
ATG4B-212ENST00000430617 CRISPLD2Q9H0B8 497 aa12.82□□□□□ -0.36
ATG4B-212ENST00000430617 TDRD3Q9H7E2 651 aaKnown RBP12.82□□□□□ -0.36
ATG4B-212ENST00000430617 HYPKQ9NX55 129 aa12.82□□□□□ -0.36
ATG4B-212ENST00000430617 PLXNB2O15031 1838 aa12.82□□□□□ -0.36
ATG4B-212ENST00000430617 FRMPD3Q5JV73 1810 aa12.82□□□□□ -0.36
ATG4B-212ENST00000430617 PHIPQ8WWQ0 1821 aa12.81□□□□□ -0.36
ATG4B-212ENST00000430617 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
ATG4B-212ENST00000430617 CHL1O00533 1208 aa12.81□□□□□ -0.36
ATG4B-212ENST00000430617 ADCY3O60266 1144 aa12.81□□□□□ -0.36
ATG4B-212ENST00000430617 INHAP05111 366 aa12.81□□□□□ -0.36
ATG4B-212ENST00000430617 SNAPC2Q13487 334 aa12.81□□□□□ -0.36
ATG4B-212ENST00000430617 UBE2OQ9C0C9 1292 aaKnown RBP12.81□□□□□ -0.36
ATG4B-212ENST00000430617 PAK6Q9NQU5 681 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-212ENST00000430617 CWC25Q9NXE8 425 aaPredicted RBP12.81□□□□□ -0.36
ATG4B-212ENST00000430617 FANCIQ9NVI1 1328 aa12.81□□□□□ -0.36
ATG4B-212ENST00000430617 PDHXO00330 501 aa12.8□□□□□ -0.36
ATG4B-212ENST00000430617 TNFAIP1Q13829 316 aa12.8□□□□□ -0.36
ATG4B-212ENST00000430617 NECAB2Q7Z6G3 386 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms