RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 PRMT6Q96LA8 375 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-211ENST00000430454 CSRNP1Q96S65 589 aa11.33□□□□□ -0.6
HDAC9-211ENST00000430454 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
HDAC9-211ENST00000430454 RNF186Q9NXI6 227 aa11.33□□□□□ -0.6
HDAC9-211ENST00000430454 A0A1B0GUL6 1792 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 TRPA1O75762 1119 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 GNAI2P04899 355 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 FGFR2P21802 821 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 BCAMP50895 628 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 RASA3Q14644 834 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 OTUD7BQ6GQQ9 843 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 MIER1Q8N108 512 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 SIL1Q9H173 461 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 ZNF70Q9UC06 446 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-211ENST00000430454 TSKSQ9UJT2 592 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 DENND2AQ9ULE3 1009 aa11.32□□□□□ -0.6
HDAC9-211ENST00000430454 SCAF8Q9UPN6 1271 aaKnown RBP11.32□□□□□ -0.6
HDAC9-211ENST00000430454 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-211ENST00000430454 ZBTB48P10074 688 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-211ENST00000430454 TM4SF4P48230 202 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 PRKG1Q13976 671 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 MAP3K11Q16584 847 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 SLF2Q8IX21 1173 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 FTSJ3Q8IY81 847 aaKnown RBP11.31□□□□□ -0.6
HDAC9-211ENST00000430454 ANKRD13AQ8IZ07 590 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
HDAC9-211ENST00000430454 IQSEC3Q9UPP2 1182 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-211ENST00000430454 WDHD1O75717 1129 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-211ENST00000430454 MS4A1P11836 297 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 TRIM27P14373 513 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 MTX1Q13505 466 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 MVPQ14764 893 aaKnown RBP11.3□□□□□ -0.6
HDAC9-211ENST00000430454 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 SPTY2D1Q68D10 685 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-211ENST00000430454 HHIPL2Q6UWX4 724 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 MOB2Q70IA6 237 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 ABHD8Q96I13 439 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 ZIC5Q96T25 663 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 MEIS3Q99687 375 aa11.3□□□□□ -0.6
HDAC9-211ENST00000430454 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
HDAC9-211ENST00000430454 ZNF646O15015 1829 aaPredicted RBP11.3□□□□□ -0.6
HDAC9-211ENST00000430454 ZBTB22O15209 634 aa11.29□□□□□ -0.6
HDAC9-211ENST00000430454 LDHBP07195 334 aaKnown RBP11.29□□□□□ -0.6
HDAC9-211ENST00000430454 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
HDAC9-211ENST00000430454 DGKZQ13574 1117 aa11.29□□□□□ -0.6
HDAC9-211ENST00000430454 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
HDAC9-211ENST00000430454 SPRYD7Q5W111 196 aa11.29□□□□□ -0.6
HDAC9-211ENST00000430454 FAM83AQ86UY5 434 aa11.29□□□□□ -0.6
HDAC9-211ENST00000430454 CSADQ9Y600 493 aa11.29□□□□□ -0.6
HDAC9-211ENST00000430454 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
HDAC9-211ENST00000430454 BCAR3O75815 825 aa11.28□□□□□ -0.6
HDAC9-211ENST00000430454 PKN2Q16513 984 aaKnown RBP11.28□□□□□ -0.6
HDAC9-211ENST00000430454 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
HDAC9-211ENST00000430454 NBPF12Q5TAG4 269 aaPredicted RBP11.28□□□□□ -0.6
HDAC9-211ENST00000430454 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
HDAC9-211ENST00000430454 ZBED9Q6R2W3 1325 aa11.28□□□□□ -0.6
HDAC9-211ENST00000430454 SALL1Q9NSC2 1324 aa11.28□□□□□ -0.6
HDAC9-211ENST00000430454 ECM29Q5VYK3 1845 aa11.28□□□□□ -0.6
HDAC9-211ENST00000430454 AKAP11Q9UKA4 1901 aa11.27□□□□□ -0.6
HDAC9-211ENST00000430454 USP2O75604 605 aaPredicted RBP11.27□□□□□ -0.61
HDAC9-211ENST00000430454 MAP3K9P80192 1104 aa11.27□□□□□ -0.61
HDAC9-211ENST00000430454 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
HDAC9-211ENST00000430454 OS9Q13438 667 aaPredicted RBP11.27□□□□□ -0.61
HDAC9-211ENST00000430454 DZIP1Q86YF9 867 aaKnown RBP11.27□□□□□ -0.61
HDAC9-211ENST00000430454 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
HDAC9-211ENST00000430454 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
HDAC9-211ENST00000430454 PCDHAC2Q9Y5I4 1007 aa11.27□□□□□ -0.61
HDAC9-211ENST00000430454 PDS5AQ29RF7 1337 aaKnown RBP11.27□□□□□ -0.61
HDAC9-211ENST00000430454 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 GSTO1P78417 241 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 ARHGEF6Q15052 776 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 CCDC102BQ68D86 513 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 CTU1Q7Z7A3 348 aaKnown RBP11.26□□□□□ -0.61
HDAC9-211ENST00000430454 WNK4Q96J92 1243 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 NEUROD6Q96NK8 337 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 CFHR5Q9BXR6 569 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 MCOLN1Q9GZU1 580 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
HDAC9-211ENST00000430454 PA2G4Q9UQ80 394 aaKnown RBP11.26□□□□□ -0.61
HDAC9-211ENST00000430454 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
HDAC9-211ENST00000430454 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
HDAC9-211ENST00000430454 UQCRFS1P1P0C7P4 283 aa11.25□□□□□ -0.61
HDAC9-211ENST00000430454 TFCP2Q12800 502 aa11.25□□□□□ -0.61
HDAC9-211ENST00000430454 APOBEC3HQ6NTF7 200 aaKnown RBP11.25□□□□□ -0.61
HDAC9-211ENST00000430454 ITPRIPQ8IWB1 547 aa11.25□□□□□ -0.61
HDAC9-211ENST00000430454 TMEM57Q8N5G2 664 aa11.25□□□□□ -0.61
HDAC9-211ENST00000430454 TMEM39BQ9GZU3 492 aa11.25□□□□□ -0.61
HDAC9-211ENST00000430454 GPR25O00155 361 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 FKTNO75072 461 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 MAP4K4O95819 1239 aaPredicted RBP11.24□□□□□ -0.61
HDAC9-211ENST00000430454 LDHCP07864 332 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 PHKA1P46020 1223 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 GTF2A2P52657 109 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 TIMM10P62072 90 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 ERICH6Q7L0X2 663 aa11.24□□□□□ -0.61
HDAC9-211ENST00000430454 IFNL1Q8IU54 200 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms