RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-203ENST00000429738 ARHGAP45Q92619 1136 aa22.2■■□□□ 1.14
MRPL28-203ENST00000429738 PRMT6Q96LA8 375 aaPredicted RBP22.2■■□□□ 1.14
MRPL28-203ENST00000429738 IGF2BP3O00425 579 aaKnown RBP eCLIP22.19■■□□□ 1.14
MRPL28-203ENST00000429738 UBTFL1P0CB47 393 aaPredicted RBP22.19■■□□□ 1.14
MRPL28-203ENST00000429738 FGFR2P21802 821 aa22.19■■□□□ 1.14
MRPL28-203ENST00000429738 GCC1Q96CN9 775 aa22.19■■□□□ 1.14
MRPL28-203ENST00000429738 KIF16BQ96L93 1317 aa22.19■■□□□ 1.14
MRPL28-203ENST00000429738 AOX1Q06278 1338 aa22.18■■□□□ 1.14
MRPL28-203ENST00000429738 EYA2O00167 538 aa22.18■■□□□ 1.14
MRPL28-203ENST00000429738 SSC5DA1L4H1 1573 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 CLRN2A0PK11 232 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 USP2O75604 605 aaPredicted RBP22.17■■□□□ 1.14
MRPL28-203ENST00000429738 IREB2P48200 963 aaKnown RBP22.17■■□□□ 1.14
MRPL28-203ENST00000429738 CAVIN4Q5BKX8 364 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 NBPF12Q5TAG4 269 aaPredicted RBP22.17■■□□□ 1.14
MRPL28-203ENST00000429738 OTUD7BQ6GQQ9 843 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 ATG9AQ7Z3C6 839 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 MIER1Q8N108 512 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 ERO1AQ96HE7 468 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 SERPINA10Q9UK55 444 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 FBXO3Q9UK99 471 aa22.17■■□□□ 1.14
MRPL28-203ENST00000429738 PUM3Q15397 648 aaKnown RBP22.16■■□□□ 1.14
MRPL28-203ENST00000429738 VPS37DQ86XT2 251 aa22.16■■□□□ 1.14
MRPL28-203ENST00000429738 VEZTQ9HBM0 779 aa22.16■■□□□ 1.14
MRPL28-203ENST00000429738 TTF2Q9UNY4 1162 aaKnown RBP22.16■■□□□ 1.14
MRPL28-203ENST00000429738 POTEFA5A3E0 1075 aa22.15■■□□□ 1.14
MRPL28-203ENST00000429738 MEIS3Q99687 375 aa22.15■■□□□ 1.14
MRPL28-203ENST00000429738 PTPN22Q9Y2R2 807 aa22.15■■□□□ 1.14
MRPL28-203ENST00000429738 MYH13Q9UKX3 1938 aa22.14■■□□□ 1.14
MRPL28-203ENST00000429738 CIAO1O76071 339 aa22.14■■□□□ 1.13
MRPL28-203ENST00000429738 GJA5P36382 358 aa22.14■■□□□ 1.13
MRPL28-203ENST00000429738 BCAMP50895 628 aa22.14■■□□□ 1.13
MRPL28-203ENST00000429738 RBM5P52756 815 aaKnown RBP eCLIP22.14■■□□□ 1.13
MRPL28-203ENST00000429738 CRHR2Q13324 411 aa22.14■■□□□ 1.13
MRPL28-203ENST00000429738 RASA3Q14644 834 aa22.14■■□□□ 1.13
MRPL28-203ENST00000429738 DIEXFQ68CQ4 756 aaKnown RBP22.14■■□□□ 1.13
MRPL28-203ENST00000429738 ANKRD13AQ8IZ07 590 aa22.14■■□□□ 1.13
MRPL28-203ENST00000429738 IQSEC3Q9UPP2 1182 aaPredicted RBP22.14■■□□□ 1.13
MRPL28-203ENST00000429738 HDAC5Q9UQL6 1122 aa22.14■■□□□ 1.13
MRPL28-203ENST00000429738 LRRFIP2Q9Y608 721 aaKnown RBP22.14■■□□□ 1.13
MRPL28-203ENST00000429738 HTTP42858 3142 aa22.13■■□□□ 1.13
MRPL28-203ENST00000429738 TESPA1A2RU30 521 aaPredicted RBP22.13■■□□□ 1.13
MRPL28-203ENST00000429738 IFIT1P09914 478 aaKnown RBP22.13■■□□□ 1.13
MRPL28-203ENST00000429738 GRIK5Q16478 980 aa22.13■■□□□ 1.13
MRPL28-203ENST00000429738 CD99L2Q8TCZ2 262 aa22.13■■□□□ 1.13
MRPL28-203ENST00000429738 TBC1D22AQ8WUA7 517 aa22.13■■□□□ 1.13
MRPL28-203ENST00000429738 PTPN18Q99952 460 aa22.13■■□□□ 1.13
MRPL28-203ENST00000429738 EFCC1Q9HA90 598 aa22.13■■□□□ 1.13
MRPL28-203ENST00000429738 LAMB1P07942 1786 aa22.12■■□□□ 1.13
MRPL28-203ENST00000429738 SPDYE2Q495Y8 402 aa22.12■■□□□ 1.13
MRPL28-203ENST00000429738 LPIN2Q92539 896 aa22.12■■□□□ 1.13
MRPL28-203ENST00000429738 MKI67P46013 3256 aaKnown RBP22.12■■□□□ 1.13
MRPL28-203ENST00000429738 TRIM27P14373 513 aa22.11■■□□□ 1.13
MRPL28-203ENST00000429738 CRKP46108 304 aa22.11■■□□□ 1.13
MRPL28-203ENST00000429738 HDLBPQ00341 1268 aaKnown RBP22.11■■□□□ 1.13
MRPL28-203ENST00000429738 SP3Q02447 781 aa22.11■■□□□ 1.13
MRPL28-203ENST00000429738 CHAF1AQ13111 956 aaPredicted RBP22.11■■□□□ 1.13
MRPL28-203ENST00000429738 TNFAIP1Q13829 316 aa22.11■■□□□ 1.13
MRPL28-203ENST00000429738 DZIP1LQ8IYY4 767 aaKnown RBP22.11■■□□□ 1.13
MRPL28-203ENST00000429738 ARMC5Q96C12 935 aa22.11■■□□□ 1.13
MRPL28-203ENST00000429738 COPRSQ9NQ92 184 aa22.11■■□□□ 1.13
MRPL28-203ENST00000429738 FRAT2O75474 233 aaPredicted RBP22.1■■□□□ 1.13
MRPL28-203ENST00000429738 BCAR3O75815 825 aa22.1■■□□□ 1.13
MRPL28-203ENST00000429738 SLC5A1P13866 664 aa22.1■■□□□ 1.13
MRPL28-203ENST00000429738 SIL1Q9H173 461 aa22.1■■□□□ 1.13
MRPL28-203ENST00000429738 ZNF70Q9UC06 446 aaPredicted RBP22.1■■□□□ 1.13
MRPL28-203ENST00000429738 CENPFP49454 3210 aa22.1■■□□□ 1.13
MRPL28-203ENST00000429738 IPO8O15397 1037 aaKnown RBP22.09■■□□□ 1.13
MRPL28-203ENST00000429738 GNAI3P08754 354 aa22.09■■□□□ 1.13
MRPL28-203ENST00000429738 HABP4Q5JVS0 413 aaKnown RBP22.09■■□□□ 1.13
MRPL28-203ENST00000429738 ATF7IPQ6VMQ6 1270 aa22.09■■□□□ 1.13
MRPL28-203ENST00000429738 MRIQ9BWK5 157 aa22.09■■□□□ 1.13
MRPL28-203ENST00000429738 TDRD3Q9H7E2 651 aaKnown RBP22.09■■□□□ 1.13
MRPL28-203ENST00000429738 SUGT1Q9Y2Z0 365 aa22.09■■□□□ 1.13
MRPL28-203ENST00000429738 IL15P40933 162 aaPredicted RBP22.08■■□□□ 1.13
MRPL28-203ENST00000429738 HNRNPUQ00839 825 aaKnown RBP eCLIP22.08■■□□□ 1.13
MRPL28-203ENST00000429738 MTX1Q13505 466 aa22.08■■□□□ 1.13
MRPL28-203ENST00000429738 OPTNQ96CV9 577 aa22.08■■□□□ 1.13
MRPL28-203ENST00000429738 MS4A4AQ96JQ5 239 aa22.08■■□□□ 1.13
MRPL28-203ENST00000429738 ELP3Q9H9T3 547 aa22.08■■□□□ 1.13
MRPL28-203ENST00000429738 CEP126Q9P2H0 1117 aa22.08■■□□□ 1.13
MRPL28-203ENST00000429738 PA2G4Q9UQ80 394 aaKnown RBP22.08■■□□□ 1.13
MRPL28-203ENST00000429738 TNNQ9UQP3 1299 aa22.08■■□□□ 1.13
MRPL28-203ENST00000429738 ZBTB22O15209 634 aa22.07■■□□□ 1.12
MRPL28-203ENST00000429738 ATP2B3Q16720 1220 aa22.07■■□□□ 1.12
MRPL28-203ENST00000429738 EN2P19622 333 aaPredicted RBP22.06■■□□□ 1.12
MRPL28-203ENST00000429738 CAP1Q01518 475 aa22.06■■□□□ 1.12
MRPL28-203ENST00000429738 ARHGEF6Q15052 776 aa22.06■■□□□ 1.12
MRPL28-203ENST00000429738 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.06■■□□□ 1.12
MRPL28-203ENST00000429738 TEPSINQ96N21 525 aa22.06■■□□□ 1.12
MRPL28-203ENST00000429738 OTOFQ9HC10 1997 aa22.06■■□□□ 1.12
MRPL28-203ENST00000429738 RBBP6Q7Z6E9 1792 aaKnown RBP22.05■■□□□ 1.12
MRPL28-203ENST00000429738 MAP3K9P80192 1104 aa22.05■■□□□ 1.12
MRPL28-203ENST00000429738 WDR66Q8TBY9 1149 aa22.05■■□□□ 1.12
MRPL28-203ENST00000429738 FRAT1Q92837 279 aaPredicted RBP22.05■■□□□ 1.12
MRPL28-203ENST00000429738 TEKT1Q969V4 418 aa22.05■■□□□ 1.12
MRPL28-203ENST00000429738 ZDHHC15Q96MV8 337 aa22.05■■□□□ 1.12
MRPL28-203ENST00000429738 TMEM106CQ9BVX2 250 aa22.05■■□□□ 1.12
MRPL28-203ENST00000429738 MAST3O60307 1309 aa22.05■■□□□ 1.12
MRPL28-203ENST00000429738 BRI3BPQ8WY22 251 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms