RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
HLA-F-219ENST00000429294 SPINK5Q9NQ38 1064 aaPredicted RBP16.5■□□□□ 0.23
HLA-F-219ENST00000429294 TMOD2Q9NZR1 351 aa16.5■□□□□ 0.23
HLA-F-219ENST00000429294 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
HLA-F-219ENST00000429294 TESPA1A2RU30 521 aaPredicted RBP16.49■□□□□ 0.23
HLA-F-219ENST00000429294 GJA5P36382 358 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 GTF2A2P52657 109 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 MAP3K9P80192 1104 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
HLA-F-219ENST00000429294 CHAF1AQ13111 956 aaPredicted RBP16.49■□□□□ 0.23
HLA-F-219ENST00000429294 METTL24Q5JXM2 366 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 CD99L2Q8TCZ2 262 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 GCC1Q96CN9 775 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 PTPN22Q9Y2R2 807 aa16.49■□□□□ 0.23
HLA-F-219ENST00000429294 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
HLA-F-219ENST00000429294 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
HLA-F-219ENST00000429294 TEKT1Q969V4 418 aa16.48■□□□□ 0.23
HLA-F-219ENST00000429294 TMEM39BQ9GZU3 492 aa16.48■□□□□ 0.23
HLA-F-219ENST00000429294 ZFYVE28Q9HCC9 887 aa16.48■□□□□ 0.23
HLA-F-219ENST00000429294 CCL15-CCL14A0A0B4J2E2 113 aa16.47■□□□□ 0.23
HLA-F-219ENST00000429294 TAF1CQ15572 869 aaPredicted RBP16.47■□□□□ 0.23
HLA-F-219ENST00000429294 CCL15Q16663 113 aa16.47■□□□□ 0.23
HLA-F-219ENST00000429294 TEPSINQ96N21 525 aa16.47■□□□□ 0.23
HLA-F-219ENST00000429294 PTPN18Q99952 460 aa16.47■□□□□ 0.23
HLA-F-219ENST00000429294 BICC1Q9H694 974 aaKnown RBP16.47■□□□□ 0.23
HLA-F-219ENST00000429294 IQSEC3Q9UPP2 1182 aaPredicted RBP16.47■□□□□ 0.23
HLA-F-219ENST00000429294 UTYO14607 1347 aa16.46■□□□□ 0.23
HLA-F-219ENST00000429294 MAST3O60307 1309 aa16.46■□□□□ 0.23
HLA-F-219ENST00000429294 PDE8BO95263 885 aa16.46■□□□□ 0.23
HLA-F-219ENST00000429294 VGLL4Q14135 290 aa16.46■□□□□ 0.23
HLA-F-219ENST00000429294 RABL6Q3YEC7 729 aaPredicted RBP16.46■□□□□ 0.23
HLA-F-219ENST00000429294 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.23
HLA-F-219ENST00000429294 KAZALD1Q96I82 304 aa16.46■□□□□ 0.23
HLA-F-219ENST00000429294 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
HLA-F-219ENST00000429294 TMEM106CQ9BVX2 250 aa16.46■□□□□ 0.23
HLA-F-219ENST00000429294 HTTP42858 3142 aa16.45■□□□□ 0.22
HLA-F-219ENST00000429294 IFIT1P09914 478 aaKnown RBP16.45■□□□□ 0.22
HLA-F-219ENST00000429294 NBPF11Q86T75 865 aa16.45■□□□□ 0.22
HLA-F-219ENST00000429294 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.45■□□□□ 0.227e-9■■□□□ 12.7
HLA-F-219ENST00000429294 ARMC5Q96C12 935 aa16.45■□□□□ 0.22
HLA-F-219ENST00000429294 OTUD5Q96G74 571 aa16.45■□□□□ 0.22
HLA-F-219ENST00000429294 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
HLA-F-219ENST00000429294 SUGT1Q9Y2Z0 365 aa16.45■□□□□ 0.22
HLA-F-219ENST00000429294 PTPRCP08575 1304 aa16.45■□□□□ 0.22
HLA-F-219ENST00000429294 LAMB1P07942 1786 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
HLA-F-219ENST00000429294 KIF22Q14807 665 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 LRRC24Q50LG9 513 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 FKBP1CQ5VVH2 108 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 DCAF15Q66K64 600 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 FAM83AQ86UY5 434 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 CDAN1Q8IWY9 1227 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 BRI3BPQ8WY22 251 aa16.44■□□□□ 0.22
HLA-F-219ENST00000429294 CENPFP49454 3210 aa16.43■□□□□ 0.22
HLA-F-219ENST00000429294 POTEFA5A3E0 1075 aa16.43■□□□□ 0.22
HLA-F-219ENST00000429294 CETPP11597 493 aa16.43■□□□□ 0.22
HLA-F-219ENST00000429294 PUM3Q15397 648 aaKnown RBP16.43■□□□□ 0.22
HLA-F-219ENST00000429294 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
HLA-F-219ENST00000429294 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
HLA-F-219ENST00000429294 ZDHHC15Q96MV8 337 aa16.43■□□□□ 0.22
HLA-F-219ENST00000429294 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 ZNF316A6NFI3 1004 aaPredicted RBP16.42■□□□□ 0.22
HLA-F-219ENST00000429294 SPDYE5A6NIY4 337 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 BCAMP50895 628 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 CACNB3P54284 484 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 SNAPC2Q13487 334 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 GRIK5Q16478 980 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 SLC9C1Q4G0N8 1177 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 MRPL50Q8N5N7 158 aaKnown RBP16.42■□□□□ 0.22
HLA-F-219ENST00000429294 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 WRNIP1Q96S55 665 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 ZCCHC17Q9NP64 241 aaKnown RBP16.42■□□□□ 0.22
HLA-F-219ENST00000429294 KIF16BQ96L93 1317 aa16.42■□□□□ 0.22
HLA-F-219ENST00000429294 OTOFQ9HC10 1997 aa16.41■□□□□ 0.22
HLA-F-219ENST00000429294 SLC5A1P13866 664 aa16.41■□□□□ 0.22
HLA-F-219ENST00000429294 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
HLA-F-219ENST00000429294 VGLL2Q8N8G2 317 aa16.41■□□□□ 0.22
HLA-F-219ENST00000429294 WDR66Q8TBY9 1149 aa16.41■□□□□ 0.22
HLA-F-219ENST00000429294 MKI67P46013 3256 aaKnown RBP16.4■□□□□ 0.22
HLA-F-219ENST00000429294 SLC4A8Q2Y0W8 1093 aa16.4■□□□□ 0.22
HLA-F-219ENST00000429294 APOBEC3HQ6NTF7 200 aaKnown RBP16.4■□□□□ 0.22
HLA-F-219ENST00000429294 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
HLA-F-219ENST00000429294 KLHDC4Q8TBB5 520 aa16.4■□□□□ 0.22
HLA-F-219ENST00000429294 CEP290O15078 2479 aa16.4■□□□□ 0.22
HLA-F-219ENST00000429294 E9PSI1 815 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 TLR2O60603 784 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 GNRH1P01148 92 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
HLA-F-219ENST00000429294 PPIL2Q13356 520 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 LPIN2Q92539 896 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 ZKSCAN4Q969J2 545 aaPredicted RBP16.39■□□□□ 0.21
HLA-F-219ENST00000429294 ZNF333Q96JL9 665 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 ZNF341Q9BYN7 854 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 USP44Q9H0E7 712 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 GNL3LQ9NVN8 582 aaKnown RBP16.39■□□□□ 0.21
HLA-F-219ENST00000429294 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
HLA-F-219ENST00000429294 EYA2O00167 538 aa16.38■□□□□ 0.21
HLA-F-219ENST00000429294 IRF6O14896 467 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms