RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 MAST3O60307 1309 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 MYO3BQ8WXR4 1341 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZNF541Q9H0D2 1346 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 YY1P25490 414 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 ADD2P35612 726 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 FKBP1AP62942 108 aaKnown RBP9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 CXCL9Q07325 125 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 UBE3CQ15386 1083 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 DIXDC1Q155Q3 683 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 TICAM2Q86XR7 235 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 KIAA0825Q8IV33 1275 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 ESYT1Q9BSJ8 1104 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 SUGT1Q9Y2Z0 365 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 RAD50Q92878 1312 aa9.53□□□□□ -0.88
HMGA1P4-201ENST00000428643 M0R2C6 588 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 FZD9O00144 591 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 MBD4O95243 580 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 VIL1P09327 827 aaKnown RBP9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 SCNN1DP51172 638 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 SLF2Q8IX21 1173 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 MIGA1Q8NAN2 632 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 NSUN4Q96CB9 384 aaKnown RBP9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 HELLSQ9NRZ9 838 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 ZBTB12Q9Y330 459 aaPredicted RBP9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 MAST2Q6P0Q8 1798 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 MROH7-TTC4A0A0A0MT08 1334 aa9.52□□□□□ -0.89
HMGA1P4-201ENST00000428643 MAGEB6P1A0A0J9YX57 407 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 TCRBV5S4A2TA0A5A2 114 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 SGSM2O43147 1006 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 IGSF3O75054 1194 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 LDHCP07864 332 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 RPS12P25398 132 aaKnown RBP9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 GMPSP49915 693 aaPredicted RBP9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 RBM5P52756 815 aaKnown RBP eCLIP9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 MFAP1P55081 439 aaKnown RBP9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 MCMDC2Q4G0Z9 681 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 TMED8Q6PL24 325 aaPredicted RBP9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 CCDC129Q6ZRS4 1044 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 KIAA1211Q6ZU35 1233 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 ADGRA1Q86SQ6 560 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 AGBL3Q8NEM8 1001 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 ZNF384Q8TF68 577 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 TEKT1Q969V4 418 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 AIDAQ96BJ3 306 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 ANO2Q9NQ90 1003 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 HDAC9Q9UKV0 1011 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 CCDC171Q6TFL3 1326 aa9.51□□□□□ -0.89
HMGA1P4-201ENST00000428643 AKAP11Q9UKA4 1901 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 GPAA1O43292 621 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 EIF5BO60841 1220 aaKnown RBP9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 REC8O95072 547 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 BAG3O95817 575 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 USP17L8P0C7I0 530 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 BTDP43251 543 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 CRKP46108 304 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 ZNF589Q86UQ0 364 aaPredicted RBP9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 GPC2Q8N158 579 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 OSBP2Q969R2 916 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 PUS7LQ9H0K6 701 aaKnown RBP9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 IL25Q9H293 177 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 ARMT1Q9H993 441 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 UPF2Q9HAU5 1272 aaKnown RBP9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 AATFQ9NY61 560 aaKnown RBP eCLIP9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 DAGLAQ9Y4D2 1042 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 MYH13Q9UKX3 1938 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 TIAM2Q8IVF5 1701 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 GAKO14976 1311 aa9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 ZC3H4Q9UPT8 1303 aaKnown RBP9.5□□□□□ -0.89
HMGA1P4-201ENST00000428643 DYNLL1P63167 89 aaKnown RBP9.49□□□□□ -0.89
HMGA1P4-201ENST00000428643 LCORLQ8N3X6 602 aa9.49□□□□□ -0.89
HMGA1P4-201ENST00000428643 GMLQ99445 158 aa9.49□□□□□ -0.89
HMGA1P4-201ENST00000428643 BACH2Q9BYV9 841 aa9.49□□□□□ -0.89
HMGA1P4-201ENST00000428643 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
HMGA1P4-201ENST00000428643 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
HMGA1P4-201ENST00000428643 SCN9AQ15858 1988 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 DDNO94850 711 aaPredicted RBP9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 APPP05067 770 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 PLCG2P16885 1265 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 DLGAP5Q15398 846 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 CFAP100Q494V2 611 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 HHIPL2Q6UWX4 724 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 MICALL2Q8IY33 904 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 TEX11Q8IYF3 940 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 ZDHHC15Q96MV8 337 aa9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 RIOK1Q9BRS2 568 aaKnown RBP9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 CRNKL1Q9BZJ0 848 aaKnown RBP9.48□□□□□ -0.89
HMGA1P4-201ENST00000428643 GPR75-ASB3A0A0A6YYF3 556 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 SHTN1A0MZ66 631 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 SEC24BO95487 1268 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 GNAT2P19087 354 aa9.47□□□□□ -0.89
HMGA1P4-201ENST00000428643 USP5P45974 858 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms