RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 TTLL5Q6EMB2 1281 aa13.22□□□□□ -0.29
SYNC-204ENST00000426909 VPS37DQ86XT2 251 aa13.22□□□□□ -0.29
SYNC-204ENST00000426909 OGFOD1Q8N543 542 aa13.22□□□□□ -0.29
SYNC-204ENST00000426909 VGLL2Q8N8G2 317 aa13.22□□□□□ -0.29
SYNC-204ENST00000426909 ZC3H15Q8WU90 426 aaKnown RBP13.22□□□□□ -0.29
SYNC-204ENST00000426909 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
SYNC-204ENST00000426909 PSME4Q14997 1843 aa13.22□□□□□ -0.29
SYNC-204ENST00000426909 IFIT1P09914 478 aaKnown RBP13.21□□□□□ -0.29
SYNC-204ENST00000426909 HIBADHP31937 336 aaKnown RBP13.21□□□□□ -0.29
SYNC-204ENST00000426909 MMP14P50281 582 aa13.21□□□□□ -0.29
SYNC-204ENST00000426909 GTF2IP78347 998 aa13.21□□□□□ -0.29
SYNC-204ENST00000426909 ATG9AQ7Z3C6 839 aa13.21□□□□□ -0.29
SYNC-204ENST00000426909 GMLQ99445 158 aa13.21□□□□□ -0.29
SYNC-204ENST00000426909 CCDC8Q9H0W5 538 aaPredicted RBP13.21□□□□□ -0.29
SYNC-204ENST00000426909 CWC22Q9HCG8 908 aaKnown RBP13.21□□□□□ -0.29
SYNC-204ENST00000426909 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 SLC5A1P13866 664 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 GYG1P46976 350 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 ZNF280AP59817 542 aaPredicted RBP13.2□□□□□ -0.3
SYNC-204ENST00000426909 TFCP2Q12800 502 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 KIF4BQ2VIQ3 1234 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
SYNC-204ENST00000426909 SAMD7Q7Z3H4 446 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 TRPM4Q8TD43 1214 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 LPIN2Q92539 896 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
SYNC-204ENST00000426909 PASKQ96RG2 1323 aa13.19□□□□□ -0.3
SYNC-204ENST00000426909 CD2BP2O95400 341 aaKnown RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 ITGBL1O95965 494 aaPredicted RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 HIRAP54198 1017 aaPredicted RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 LSG1Q9H089 658 aaKnown RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 MYOZ2Q9NPC6 264 aa13.19□□□□□ -0.3
SYNC-204ENST00000426909 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
SYNC-204ENST00000426909 DBNLQ9UJU6 430 aaKnown RBP13.19□□□□□ -0.3
SYNC-204ENST00000426909 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
SYNC-204ENST00000426909 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
SYNC-204ENST00000426909 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
SYNC-204ENST00000426909 PTMSP20962 102 aa13.18□□□□□ -0.3
SYNC-204ENST00000426909 FGFR2P21802 821 aa13.18□□□□□ -0.3
SYNC-204ENST00000426909 FKBP1AP62942 108 aaKnown RBP13.18□□□□□ -0.3
SYNC-204ENST00000426909 ATP2B3Q16720 1220 aa13.18□□□□□ -0.3
SYNC-204ENST00000426909 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
SYNC-204ENST00000426909 FBXO33Q7Z6M2 555 aa13.18□□□□□ -0.3
SYNC-204ENST00000426909 TDRD7Q8NHU6 1098 aaKnown RBP13.18□□□□□ -0.3
SYNC-204ENST00000426909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYNC-204ENST00000426909 HAUS7Q99871 368 aa13.18□□□□□ -0.3
SYNC-204ENST00000426909 MXD3Q9BW11 206 aa13.18□□□□□ -0.3
SYNC-204ENST00000426909 TLR7Q9NYK1 1049 aaKnown RBP13.18□□□□□ -0.3
SYNC-204ENST00000426909 EGFRP00533 1210 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 NEK4P51957 841 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 NUCB2P80303 420 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 KIAA0825Q8IV33 1275 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 KCNB2Q92953 911 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 DCPSQ96C86 337 aaKnown RBP13.17□□□□□ -0.3
SYNC-204ENST00000426909 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 BOLA2Q9H3K6 86 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
SYNC-204ENST00000426909 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
SYNC-204ENST00000426909 ZNF646O15015 1829 aaPredicted RBP13.17□□□□□ -0.3
SYNC-204ENST00000426909 FAM205AQ6ZU69 1335 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 TMEM88BA6NKF7 163 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 BCAMP50895 628 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 SCARF1Q14162 830 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
SYNC-204ENST00000426909 CCDC171Q6TFL3 1326 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 MCM4P33991 863 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 HTRA3P83110 453 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
SYNC-204ENST00000426909 MFSD14BQ5SR56 506 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 RNF20Q5VTR2 975 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 CERS5Q8N5B7 392 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 TBC1D22AQ8WUA7 517 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
SYNC-204ENST00000426909 DBNDD2Q9BQY9 259 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 GNL3LQ9NVN8 582 aaKnown RBP13.15□□□□□ -0.3
SYNC-204ENST00000426909 PALD1Q9ULE6 856 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 JAG2Q9Y219 1238 aa13.15□□□□□ -0.3
SYNC-204ENST00000426909 TRAF5O00463 557 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 ZKSCAN1P17029 563 aaPredicted RBP13.14□□□□□ -0.31
SYNC-204ENST00000426909 CHAF1AQ13111 956 aaPredicted RBP13.14□□□□□ -0.31
SYNC-204ENST00000426909 CUL4AQ13619 759 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 KRT26Q7Z3Y9 468 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 SULF1Q8IWU6 871 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 MAP4K1Q92918 833 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 GLIS2Q9BZE0 524 aaPredicted RBP13.14□□□□□ -0.31
SYNC-204ENST00000426909 IL25Q9H293 177 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 GGA3Q9NZ52 723 aa13.14□□□□□ -0.31
SYNC-204ENST00000426909 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
SYNC-204ENST00000426909 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
SYNC-204ENST00000426909 A0A1B0GUL7 405 aa13.13□□□□□ -0.31
SYNC-204ENST00000426909 F8W031 263 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms