RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TTF2Q9UNY4 1162 aaKnown RBP12.66□□□□□ -0.38
GACAT3-201ENST00000426539 GJA5P36382 358 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 SOX10P56693 466 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 SLC10A4Q96EP9 437 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 TEPSINQ96N21 525 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 TDRD3Q9H7E2 651 aaKnown RBP12.65□□□□□ -0.38
GACAT3-201ENST00000426539 SERPINA10Q9UK55 444 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 IQSEC3Q9UPP2 1182 aaPredicted RBP12.65□□□□□ -0.38
GACAT3-201ENST00000426539 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
GACAT3-201ENST00000426539 IGF2BP3O00425 579 aaKnown RBP eCLIP12.64□□□□□ -0.39
GACAT3-201ENST00000426539 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
GACAT3-201ENST00000426539 PDE8BO95263 885 aa12.64□□□□□ -0.39
GACAT3-201ENST00000426539 CRKP46108 304 aa12.64□□□□□ -0.39
GACAT3-201ENST00000426539 RFX5P48382 616 aaPredicted RBP12.64□□□□□ -0.39
GACAT3-201ENST00000426539 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
GACAT3-201ENST00000426539 METTL24Q5JXM2 366 aa12.64□□□□□ -0.39
GACAT3-201ENST00000426539 DZIP1LQ8IYY4 767 aaKnown RBP12.64□□□□□ -0.39
GACAT3-201ENST00000426539 TRMT2AQ8IZ69 625 aaKnown RBP12.64□□□□□ -0.39
GACAT3-201ENST00000426539 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
GACAT3-201ENST00000426539 MANSC4A6NHS7 340 aaPredicted RBP12.63□□□□□ -0.39
GACAT3-201ENST00000426539 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
GACAT3-201ENST00000426539 FGFR2P21802 821 aa12.63□□□□□ -0.39
GACAT3-201ENST00000426539 BCAMP50895 628 aa12.63□□□□□ -0.39
GACAT3-201ENST00000426539 CHAF1AQ13111 956 aaPredicted RBP12.63□□□□□ -0.39
GACAT3-201ENST00000426539 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
GACAT3-201ENST00000426539 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
GACAT3-201ENST00000426539 TCP10L2B9ZVM9 353 aa12.62□□□□□ -0.39
GACAT3-201ENST00000426539 IREB2P48200 963 aaKnown RBP12.62□□□□□ -0.39
GACAT3-201ENST00000426539 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
GACAT3-201ENST00000426539 ALDH1L2Q3SY69 923 aa12.62□□□□□ -0.39
GACAT3-201ENST00000426539 TMEM39BQ9GZU3 492 aa12.62□□□□□ -0.39
GACAT3-201ENST00000426539 ECM29Q5VYK3 1845 aa12.62□□□□□ -0.39
GACAT3-201ENST00000426539 FKTNO75072 461 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 INHBEP58166 350 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 TNFAIP1Q13829 316 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 CAVIN4Q5BKX8 364 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 VPS37DQ86XT2 251 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 ANKRD13AQ8IZ07 590 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 PTPN18Q99952 460 aa12.61□□□□□ -0.39
GACAT3-201ENST00000426539 TESPA1A2RU30 521 aaPredicted RBP12.6□□□□□ -0.39
GACAT3-201ENST00000426539 EYA2O00167 538 aa12.6□□□□□ -0.39
GACAT3-201ENST00000426539 CACNB3P54284 484 aa12.6□□□□□ -0.39
GACAT3-201ENST00000426539 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
GACAT3-201ENST00000426539 PUM3Q15397 648 aaKnown RBP12.6□□□□□ -0.39
GACAT3-201ENST00000426539 FBXO46Q6PJ61 603 aaPredicted RBP12.6□□□□□ -0.39
GACAT3-201ENST00000426539 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.6□□□□□ -0.39
GACAT3-201ENST00000426539 ATG9AQ7Z3C6 839 aa12.6□□□□□ -0.39
GACAT3-201ENST00000426539 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
GACAT3-201ENST00000426539 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
GACAT3-201ENST00000426539 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
GACAT3-201ENST00000426539 KIF16BQ96L93 1317 aa12.6□□□□□ -0.39
GACAT3-201ENST00000426539 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
GACAT3-201ENST00000426539 CAP1Q01518 475 aa12.59□□□□□ -0.39
GACAT3-201ENST00000426539 APOBEC3HQ6NTF7 200 aaKnown RBP12.59□□□□□ -0.39
GACAT3-201ENST00000426539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.59□□□□□ -0.39
GACAT3-201ENST00000426539 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
GACAT3-201ENST00000426539 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
GACAT3-201ENST00000426539 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
GACAT3-201ENST00000426539 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
GACAT3-201ENST00000426539 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.4
GACAT3-201ENST00000426539 IFIT1P09914 478 aaKnown RBP12.58□□□□□ -0.4
GACAT3-201ENST00000426539 CRHR2Q13324 411 aa12.58□□□□□ -0.4
GACAT3-201ENST00000426539 VGLL4Q14135 290 aa12.58□□□□□ -0.4
GACAT3-201ENST00000426539 TEKT1Q969V4 418 aa12.58□□□□□ -0.4
GACAT3-201ENST00000426539 NOB1Q9ULX3 412 aaKnown RBP12.58□□□□□ -0.4
GACAT3-201ENST00000426539 LAMB1P07942 1786 aa12.57□□□□□ -0.4
GACAT3-201ENST00000426539 TNNI2P48788 182 aa12.57□□□□□ -0.4
GACAT3-201ENST00000426539 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
GACAT3-201ENST00000426539 OTOP1Q7RTM1 612 aa12.57□□□□□ -0.4
GACAT3-201ENST00000426539 BRI3BPQ8WY22 251 aa12.57□□□□□ -0.4
GACAT3-201ENST00000426539 LPIN2Q92539 896 aa12.57□□□□□ -0.4
GACAT3-201ENST00000426539 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
GACAT3-201ENST00000426539 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 PITPNM1O00562 1244 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 CIAO1O76071 339 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 SLC34A2O95436 690 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
GACAT3-201ENST00000426539 SLC5A1P13866 664 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 HHIPL2Q6UWX4 724 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 SIL1Q9H173 461 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 TRIM17Q9Y577 477 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 SNCAIPQ9Y6H5 919 aa12.56□□□□□ -0.4
GACAT3-201ENST00000426539 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
GACAT3-201ENST00000426539 FKBP1CQ5VVH2 108 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 FAM83AQ86UY5 434 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 CD99L2Q8TCZ2 262 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 OTUD5Q96G74 571 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 MEIS3Q99687 375 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 PA2G4Q9UQ80 394 aaKnown RBP12.55□□□□□ -0.4
GACAT3-201ENST00000426539 LRRFIP2Q9Y608 721 aaKnown RBP12.55□□□□□ -0.4
GACAT3-201ENST00000426539 MAST3O60307 1309 aa12.55□□□□□ -0.4
GACAT3-201ENST00000426539 CCL15-CCL14A0A0B4J2E2 113 aa12.54□□□□□ -0.4
GACAT3-201ENST00000426539 PRDX5P30044 214 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms