RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 WDR33Q9C0J8 1336 aaKnown RBP16.86■□□□□ 0.29
SNX3-204ENST00000426155 MYH2Q9UKX2 1941 aa16.86■□□□□ 0.29
SNX3-204ENST00000426155 MYO5AQ9Y4I1 1855 aaKnown RBP16.85■□□□□ 0.29
SNX3-204ENST00000426155 CRKP46108 304 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 MMP14P50281 582 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 OS9Q13438 667 aaPredicted RBP16.85■□□□□ 0.29
SNX3-204ENST00000426155 MOB2Q70IA6 237 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 TBC1D22AQ8WUA7 517 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 CAPNS2Q96L46 248 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 DDX19BQ9UMR2 479 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 AKAP11Q9UKA4 1901 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 SSC5DA1L4H1 1573 aa16.85■□□□□ 0.29
SNX3-204ENST00000426155 AOC2O75106 756 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 HSPA1AP0DMV8 641 aaKnown RBP16.84■□□□□ 0.29
SNX3-204ENST00000426155 HSPA1BP0DMV9 641 aaKnown RBP16.84■□□□□ 0.29
SNX3-204ENST00000426155 HUNKP57058 714 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 RASGRF1Q13972 1273 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
SNX3-204ENST00000426155 VEZTQ9HBM0 779 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 SERPINA10Q9UK55 444 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 EXOC6BQ9Y2D4 811 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 OTOFQ9HC10 1997 aa16.84■□□□□ 0.29
SNX3-204ENST00000426155 PRDX5P30044 214 aa16.83■□□□□ 0.28
SNX3-204ENST00000426155 PI16Q6UXB8 463 aa16.83■□□□□ 0.28
SNX3-204ENST00000426155 TDRD3Q9H7E2 651 aaKnown RBP16.83■□□□□ 0.28
SNX3-204ENST00000426155 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
SNX3-204ENST00000426155 FZD1Q9UP38 647 aa16.83■□□□□ 0.28
SNX3-204ENST00000426155 SIRT2Q8IXJ6 389 aa16.82■□□□□ 0.28
SNX3-204ENST00000426155 C2orf69Q8N8R5 385 aa16.82■□□□□ 0.28
SNX3-204ENST00000426155 WDR66Q8TBY9 1149 aa16.82■□□□□ 0.28
SNX3-204ENST00000426155 GNL3LQ9NVN8 582 aaKnown RBP16.82■□□□□ 0.28
SNX3-204ENST00000426155 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
SNX3-204ENST00000426155 MYO1BO43795 1136 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 CACNB3P54284 484 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 PRKG1Q13976 671 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 DIXDC1Q155Q3 683 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.81■□□□□ 0.28
SNX3-204ENST00000426155 TEKT1Q969V4 418 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 DBNDD2Q9BQY9 259 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 DEFB129Q9H1M3 183 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
SNX3-204ENST00000426155 ZNF70Q9UC06 446 aaPredicted RBP16.81■□□□□ 0.28
SNX3-204ENST00000426155 DENND2AQ9ULE3 1009 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 FPGT-TNNI3KV9GXZ4 949 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
SNX3-204ENST00000426155 SEMA3EO15041 775 aa16.8■□□□□ 0.28
SNX3-204ENST00000426155 CDAN1Q8IWY9 1227 aa16.8■□□□□ 0.28
SNX3-204ENST00000426155 ZIC5Q96T25 663 aa16.8■□□□□ 0.28
SNX3-204ENST00000426155 MAST3O60307 1309 aa16.79■□□□□ 0.28
SNX3-204ENST00000426155 SALL1Q9NSC2 1324 aa16.79■□□□□ 0.28
SNX3-204ENST00000426155 ECE1P42892 770 aa16.79■□□□□ 0.28
SNX3-204ENST00000426155 GORABQ5T7V8 394 aa16.79■□□□□ 0.28
SNX3-204ENST00000426155 RGMBQ6NW40 437 aa16.79■□□□□ 0.28
SNX3-204ENST00000426155 HHIPL1Q96JK4 782 aa16.79■□□□□ 0.28
SNX3-204ENST00000426155 HMG20BQ9P0W2 317 aa16.79■□□□□ 0.28
SNX3-204ENST00000426155 TCP10L2B9ZVM9 353 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 APBB1O00213 710 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 LDHBP07195 334 aaKnown RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 ARID4AP29374 1257 aaPredicted RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 MCAMP43121 646 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 RRP1P56182 461 aaKnown RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 HDLBPQ00341 1268 aaKnown RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 TTLL12Q14166 644 aaPredicted RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 RASA3Q14644 834 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 APOBEC3HQ6NTF7 200 aaKnown RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 ZDHHC15Q96MV8 337 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 CCDC8Q9H0W5 538 aaPredicted RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 GPR108Q9NPR9 543 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 ABCF2Q9UG63 623 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 DBNLQ9UJU6 430 aaKnown RBP16.78■□□□□ 0.28
SNX3-204ENST00000426155 SUGT1Q9Y2Z0 365 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 DAGLAQ9Y4D2 1042 aa16.78■□□□□ 0.28
SNX3-204ENST00000426155 PDS5AQ29RF7 1337 aaKnown RBP16.77■□□□□ 0.28
SNX3-204ENST00000426155 AK9Q5TCS8 1911 aa16.77■□□□□ 0.28
SNX3-204ENST00000426155 FAM155AB1AL88 458 aaPredicted RBP16.77■□□□□ 0.28
SNX3-204ENST00000426155 ZNF157P51786 506 aaPredicted RBP16.77■□□□□ 0.28
SNX3-204ENST00000426155 NBPF12Q5TAG4 269 aaPredicted RBP16.77■□□□□ 0.28
SNX3-204ENST00000426155 TBC1D9Q6ZT07 1266 aa16.77■□□□□ 0.28
SNX3-204ENST00000426155 RPAP2Q8IXW5 612 aaPredicted RBP16.77■□□□□ 0.28
SNX3-204ENST00000426155 TMEM39BQ9GZU3 492 aa16.77■□□□□ 0.28
SNX3-204ENST00000426155 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
SNX3-204ENST00000426155 DOCK2Q92608 1830 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 FOXN1O15353 648 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 NF2P35240 595 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 HHIPL2Q6UWX4 724 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 SPATA5Q8NB90 893 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 BCL11AQ9H165 835 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 SNRKQ9NRH2 765 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 WBP1LQ9NX94 342 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 PPP2R3BQ9Y5P8 575 aa16.76■□□□□ 0.27
SNX3-204ENST00000426155 SLC10A3P09131 477 aa16.75■□□□□ 0.27
SNX3-204ENST00000426155 FKBP1BP68106 108 aa16.75■□□□□ 0.27
SNX3-204ENST00000426155 TTC39AQ5SRH9 613 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms