RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 PNMA6EA0A0J9YXQ4 647 aa11.08□□□□□ -0.64
TPM3P4-201ENST00000425942 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
TPM3P4-201ENST00000425942 ATG9AQ7Z3C6 839 aa11.08□□□□□ -0.64
TPM3P4-201ENST00000425942 LPIN2Q92539 896 aa11.08□□□□□ -0.64
TPM3P4-201ENST00000425942 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
TPM3P4-201ENST00000425942 AKAP2Q9Y2D5 859 aa11.08□□□□□ -0.64
TPM3P4-201ENST00000425942 NOP58Q9Y2X3 529 aaKnown RBP11.08□□□□□ -0.64
TPM3P4-201ENST00000425942 MYH7P12883 1935 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 ECE2O60344 883 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 IFIT1P09914 478 aaKnown RBP11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 SLC5A1P13866 664 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 MMP14P50281 582 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 TNIP1Q15025 636 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 LRRC24Q50LG9 513 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 DDX12PQ92771 950 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 FBXW7Q969H0 707 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 C1orf115Q9H7X2 142 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 GPR108Q9NPR9 543 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 CEP126Q9P2H0 1117 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 AKAP11Q9UKA4 1901 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 ZNF541Q9H0D2 1346 aa11.07□□□□□ -0.64
TPM3P4-201ENST00000425942 CENPBP07199 599 aaPredicted RBP11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 FGFR2P21802 821 aa11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 CAVIN4Q5BKX8 364 aa11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 CIAPIN1Q6FI81 312 aa11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 KLHDC4Q8TBB5 520 aa11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 SLC4A5Q9BY07 1137 aa11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 PUS3Q9BZE2 481 aaKnown RBP11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 SIL1Q9H173 461 aa11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 GPBP1L1Q9HC44 474 aaPredicted RBP11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 PDS5AQ29RF7 1337 aaKnown RBP11.06□□□□□ -0.64
TPM3P4-201ENST00000425942 TAF5LO75529 589 aa11.05□□□□□ -0.64
TPM3P4-201ENST00000425942 IL1R1P14778 569 aa11.05□□□□□ -0.64
TPM3P4-201ENST00000425942 COL9A1P20849 921 aa11.05□□□□□ -0.64
TPM3P4-201ENST00000425942 FKBP1AP62942 108 aaKnown RBP11.05□□□□□ -0.64
TPM3P4-201ENST00000425942 ATP2B3Q16720 1220 aa11.05□□□□□ -0.64
TPM3P4-201ENST00000425942 DBNDD1Q9H9R9 158 aa11.05□□□□□ -0.64
TPM3P4-201ENST00000425942 PA2G4Q9UQ80 394 aaKnown RBP11.05□□□□□ -0.64
TPM3P4-201ENST00000425942 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 PPP1R3GB7ZBB8 358 aa11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 SEMA3EO15041 775 aa11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 RAB11FIP3O75154 756 aa11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 STRIP1Q5VSL9 837 aa11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 ZNF784Q8NCA9 323 aaPredicted RBP11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 EPAS1Q99814 870 aa11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
TPM3P4-201ENST00000425942 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 SPDYE16A6NNV3 312 aaPredicted RBP11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 SURF6O75683 361 aaKnown RBP11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 HIBADHP31937 336 aaKnown RBP11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 USP17L1Q7RTZ2 530 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 VPS37DQ86XT2 251 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 AGBL3Q8NEM8 1001 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 HELBQ8NG08 1087 aaPredicted RBP11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 DPF2Q92785 391 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 KIF1BPQ96EK5 621 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 CD209Q9NNX6 404 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 GNL3LQ9NVN8 582 aaKnown RBP11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 SUPT16HQ9Y5B9 1047 aaKnown RBP11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 FAM205AQ6ZU69 1335 aa11.03□□□□□ -0.64
TPM3P4-201ENST00000425942 AK9Q5TCS8 1911 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 MYH2Q9UKX2 1941 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 A0A1B0GUL7 405 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 IGSF3O75054 1194 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 VIL1P09327 827 aaKnown RBP11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 VEGFAP15692 232 aaPredicted RBP11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 KLRK1P26718 216 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 CXCL9Q07325 125 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 TBC1D22AQ8WUA7 517 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 GPR101Q96P66 508 aaPredicted RBP11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 HACL1Q9UJ83 578 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 FOCADQ5VW36 1801 aa11.02□□□□□ -0.65
TPM3P4-201ENST00000425942 COL1A1P02452 1464 aaPredicted RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 PSMD14O00487 310 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 DDNO94850 711 aaPredicted RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 TFCP2Q12800 502 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 HDAC1Q13547 482 aaPredicted RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 NBR1Q14596 966 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 RSBN1LQ6PCB5 846 aaPredicted RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 FBXO33Q7Z6M2 555 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 TXNRD3Q86VQ6 643 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 ZGPATQ8N5A5 531 aaKnown RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 TDRD7Q8NHU6 1098 aaKnown RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 FAM84BQ96KN1 310 aaPredicted RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 SUGT1Q9Y2Z0 365 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 MYO5AQ9Y4I1 1855 aaKnown RBP11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 MAST3O60307 1309 aa11.01□□□□□ -0.65
TPM3P4-201ENST00000425942 RAD17O75943 681 aa11□□□□□ -0.65
TPM3P4-201ENST00000425942 SASH1O94885 1247 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms