RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ZBTB22O15209 634 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 MYO1BO43795 1136 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 SLC10A3P09131 477 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 LBX1P52954 281 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 CCDC102BQ68D86 513 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 SSH3Q8TE77 659 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 VEZTQ9HBM0 779 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 FZD1Q9UP38 647 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 SUGT1Q9Y2Z0 365 aa22.75■■□□□ 1.23
SMARCAL1-205ENST00000425815 IFFO2Q5TF58 517 aa22.74■■□□□ 1.23
SMARCAL1-205ENST00000425815 RASAL3Q86YV0 1011 aa22.74■■□□□ 1.23
SMARCAL1-205ENST00000425815 A0A1B0GUL7 405 aa22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 KIF23Q02241 960 aaPredicted RBP22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 PRKG1Q13976 671 aa22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 RASA3Q14644 834 aa22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 APOBEC3HQ6NTF7 200 aaKnown RBP22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 WDR66Q8TBY9 1149 aa22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 XAGE2Q96GT9 111 aa22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 PRDM10Q9NQV6 1147 aa22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 PPP2R3BQ9Y5P8 575 aa22.73■■□□□ 1.23
SMARCAL1-205ENST00000425815 NF2P35240 595 aa22.72■■□□□ 1.23
SMARCAL1-205ENST00000425815 LDLRAD1Q5T700 205 aa22.72■■□□□ 1.23
SMARCAL1-205ENST00000425815 NBPF12Q5TAG4 269 aaPredicted RBP22.72■■□□□ 1.23
SMARCAL1-205ENST00000425815 ZDHHC15Q96MV8 337 aa22.72■■□□□ 1.23
SMARCAL1-205ENST00000425815 GNL3LQ9NVN8 582 aaKnown RBP22.72■■□□□ 1.23
SMARCAL1-205ENST00000425815 AKAP2Q9Y2D5 859 aa22.72■■□□□ 1.23
SMARCAL1-205ENST00000425815 G3BP1Q13283 466 aaKnown RBP eCLIP22.71■■□□□ 1.23
SMARCAL1-205ENST00000425815 TTLL12Q14166 644 aaPredicted RBP22.71■■□□□ 1.23
SMARCAL1-205ENST00000425815 TEKT1Q969V4 418 aa22.71■■□□□ 1.23
SMARCAL1-205ENST00000425815 TEPSINQ96N21 525 aa22.71■■□□□ 1.23
SMARCAL1-205ENST00000425815 DENND2AQ9ULE3 1009 aa22.71■■□□□ 1.23
SMARCAL1-205ENST00000425815 SSC5DA1L4H1 1573 aa22.71■■□□□ 1.23
SMARCAL1-205ENST00000425815 PAPPA2Q9BXP8 1791 aa22.71■■□□□ 1.23
SMARCAL1-205ENST00000425815 SEMA3EO15041 775 aa22.7■■□□□ 1.22
SMARCAL1-205ENST00000425815 PRDX5P30044 214 aa22.7■■□□□ 1.22
SMARCAL1-205ENST00000425815 HHIPL2Q6UWX4 724 aa22.7■■□□□ 1.22
SMARCAL1-205ENST00000425815 CDAN1Q8IWY9 1227 aa22.7■■□□□ 1.22
SMARCAL1-205ENST00000425815 CSRNP1Q96S65 589 aa22.7■■□□□ 1.22
SMARCAL1-205ENST00000425815 TSKSQ9UJT2 592 aa22.7■■□□□ 1.22
SMARCAL1-205ENST00000425815 RCAN3Q9UKA8 241 aa22.7■■□□□ 1.22
SMARCAL1-205ENST00000425815 SALL1Q9NSC2 1324 aa22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 TCP10L2B9ZVM9 353 aa22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 RASGRF1Q13972 1273 aa22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 MAP3K11Q16584 847 aa22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 ARMC9Q7Z3E5 817 aa22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 NEUROD6Q96NK8 337 aa22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 BEGAINQ9BUH8 593 aa22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 ANGEL1Q9UNK9 670 aaKnown RBP22.69■■□□□ 1.22
SMARCAL1-205ENST00000425815 CACNB3P54284 484 aa22.68■■□□□ 1.22
SMARCAL1-205ENST00000425815 CEP85Q6P2H3 762 aa22.68■■□□□ 1.22
SMARCAL1-205ENST00000425815 NOP58Q9Y2X3 529 aaKnown RBP22.68■■□□□ 1.22
SMARCAL1-205ENST00000425815 USP2O75604 605 aaPredicted RBP22.67■■□□□ 1.22
SMARCAL1-205ENST00000425815 SUPT20HL1Q3ZLR7 823 aa22.67■■□□□ 1.22
SMARCAL1-205ENST00000425815 TMEM39BQ9GZU3 492 aa22.67■■□□□ 1.22
SMARCAL1-205ENST00000425815 MAST3O60307 1309 aa22.66■■□□□ 1.22
SMARCAL1-205ENST00000425815 SURF6O75683 361 aaKnown RBP22.66■■□□□ 1.22
SMARCAL1-205ENST00000425815 TNFAIP1Q13829 316 aa22.66■■□□□ 1.22
SMARCAL1-205ENST00000425815 MVPQ14764 893 aaKnown RBP22.66■■□□□ 1.22
SMARCAL1-205ENST00000425815 DIXDC1Q155Q3 683 aa22.66■■□□□ 1.22
SMARCAL1-205ENST00000425815 TNS4Q8IZW8 715 aa22.66■■□□□ 1.22
SMARCAL1-205ENST00000425815 DAGLAQ9Y4D2 1042 aa22.66■■□□□ 1.22
SMARCAL1-205ENST00000425815 ARAP2Q8WZ64 1704 aa22.65■■□□□ 1.22
SMARCAL1-205ENST00000425815 CA12O43570 354 aa22.65■■□□□ 1.22
SMARCAL1-205ENST00000425815 LDHBP07195 334 aaKnown RBP22.65■■□□□ 1.22
SMARCAL1-205ENST00000425815 GPR108Q9NPR9 543 aa22.65■■□□□ 1.22
SMARCAL1-205ENST00000425815 COG6Q9Y2V7 657 aa22.65■■□□□ 1.22
SMARCAL1-205ENST00000425815 PDS5AQ29RF7 1337 aaKnown RBP22.64■■□□□ 1.22
SMARCAL1-205ENST00000425815 PPP1R12BO60237 982 aaPredicted RBP22.64■■□□□ 1.21
SMARCAL1-205ENST00000425815 MS4A1P11836 297 aa22.64■■□□□ 1.21
SMARCAL1-205ENST00000425815 RNF186Q9NXI6 227 aa22.64■■□□□ 1.21
SMARCAL1-205ENST00000425815 HMG20BQ9P0W2 317 aa22.64■■□□□ 1.21
SMARCAL1-205ENST00000425815 TNNI3KQ59H18 835 aa22.63■■□□□ 1.21
SMARCAL1-205ENST00000425815 C20orf194Q5TEA3 1177 aa22.63■■□□□ 1.21
SMARCAL1-205ENST00000425815 PI16Q6UXB8 463 aa22.63■■□□□ 1.21
SMARCAL1-205ENST00000425815 CLMNQ96JQ2 1002 aa22.63■■□□□ 1.21
SMARCAL1-205ENST00000425815 ZBTB40Q9NUA8 1239 aa22.63■■□□□ 1.21
SMARCAL1-205ENST00000425815 FPGT-TNNI3KV9GXZ4 949 aa22.63■■□□□ 1.21
SMARCAL1-205ENST00000425815 ARID4AP29374 1257 aaPredicted RBP22.62■■□□□ 1.21
SMARCAL1-205ENST00000425815 MKRN3Q13064 507 aaKnown RBP22.62■■□□□ 1.21
SMARCAL1-205ENST00000425815 FKBP1CQ5VVH2 108 aa22.62■■□□□ 1.21
SMARCAL1-205ENST00000425815 CDC42EP5Q6NZY7 148 aa22.62■■□□□ 1.21
SMARCAL1-205ENST00000425815 TNNI2P48788 182 aa22.61■■□□□ 1.21
SMARCAL1-205ENST00000425815 SPRYD7Q5W111 196 aa22.61■■□□□ 1.21
SMARCAL1-205ENST00000425815 FAM83AQ86UY5 434 aa22.61■■□□□ 1.21
SMARCAL1-205ENST00000425815 REM2Q8IYK8 340 aaPredicted RBP22.61■■□□□ 1.21
SMARCAL1-205ENST00000425815 ZNF384Q8TF68 577 aa22.61■■□□□ 1.21
SMARCAL1-205ENST00000425815 SLC10A4Q96EP9 437 aa22.61■■□□□ 1.21
SMARCAL1-205ENST00000425815 DBNDD2Q9BQY9 259 aa22.61■■□□□ 1.21
SMARCAL1-205ENST00000425815 ECM29Q5VYK3 1845 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 UNCXA6NJT0 531 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 TRPA1O75762 1119 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 MCAMP43121 646 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 TM4SF4P48230 202 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 OS9Q13438 667 aaPredicted RBP22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 SIRT2Q8IXJ6 389 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 ZGPATQ8N5A5 531 aaKnown RBP22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 SPATA5Q8NB90 893 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 FAM163AQ96GL9 167 aaPredicted RBP22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 SAGE1Q9NXZ1 904 aa22.6■■□□□ 1.21
SMARCAL1-205ENST00000425815 ABCF2Q9UG63 623 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms