RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 UTRNP46939 3433 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 HMMRO75330 724 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TAF5LO75529 589 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 IGHDP01880 384 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ATP2B4P23634 1241 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 RASSF7Q02833 373 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 PTGDRQ13258 359 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 G3BP1Q13283 466 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 DPP8Q6V1X1 898 aaPredicted RBP8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 C15orf52Q6ZUT6 534 aaKnown RBP8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 VPS33BQ9H267 617 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 DCTPP1Q9H773 170 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SPEF2Q9C093 1822 aa8.75□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TFCP2Q12800 502 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 UBE4AQ14139 1066 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 METTL24Q5JXM2 366 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 NUDT18Q6ZVK8 323 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TATDN2Q93075 761 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 GPR101Q96P66 508 aaPredicted RBP8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TMX4Q9H1E5 349 aaPredicted RBP8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 GPR108Q9NPR9 543 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ANKIB1Q9P2G1 1089 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 CEP126Q9P2H0 1117 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 GGA1Q9UJY5 639 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 EXOC6BQ9Y2D4 811 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ZNF804BA4D1E1 1349 aa8.74□□□□□ -1.01
CHCHD3P1-201ENST00000425516 A0A1B0GUL6 1792 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 C6orf229H3BNL8 230 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 GPR37O15354 613 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 RAB11FIP3O75154 756 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 UFL1O94874 794 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 KLRK1P26718 216 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 KIAA2012Q0VF49 1180 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 HSP90AB4PQ58FF6 505 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ERICH6BQ5W0A0 696 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 LAPTM4BQ86VI4 370 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TXNRD3Q86VQ6 643 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SMC5Q8IY18 1101 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SUPT20HQ8NEM7 779 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 RHPN1Q8TCX5 695 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TAOK3Q9H2K8 898 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ZNF277Q9NRM2 450 aaPredicted RBP8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 PNMA3Q9UL41 463 aa8.73□□□□□ -1.01
CHCHD3P1-201ENST00000425516 COL4A5P29400 1685 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SOWAHBA6NEL2 793 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 LMNB1P20700 586 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 FECHP22830 423 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 IARSP41252 1262 aaKnown RBP8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 TIMM10P62072 90 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 PUM3Q15397 648 aaKnown RBP8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 AOC3Q16853 763 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 WASHC4Q2M389 1173 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 FBXO33Q7Z6M2 555 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 ERC1Q8IUD2 1116 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 LPIN2Q92539 896 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 EAF2Q96CJ1 260 aaPredicted RBP8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 KIF1BPQ96EK5 621 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 FAM84BQ96KN1 310 aaPredicted RBP8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 EYA3Q99504 573 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 RWDD1Q9H446 243 aaPredicted RBP8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 SBF1O95248 1867 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 MED23Q9ULK4 1368 aa8.72□□□□□ -1.01
CHCHD3P1-201ENST00000425516 NEFLP07196 543 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ATP2B3Q16720 1220 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 TNNI3KQ59H18 835 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ANKK1Q8NFD2 765 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 GCC1Q96CN9 775 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZC3H12CQ9C0D7 883 aaKnown RBP8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 WBP1LQ9NX94 342 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 AKAP2Q9Y2D5 859 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 FPGT-TNNI3KV9GXZ4 949 aa8.71□□□□□ -1.02
CHCHD3P1-201ENST00000425516 A0A1B0GUL7 405 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 YDJCA8MPS7 323 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 FZD9O00144 591 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 PPIP5K2O43314 1243 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 IFIT1P09914 478 aaKnown RBP8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ADORA1P30542 326 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 OS9Q13438 667 aaPredicted RBP8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 C9orf131Q5VYM1 1079 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 LRRCC1Q9C099 1032 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 IL1RAPL2Q9NP60 686 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 RBM27Q9P2N5 1060 aaKnown RBP8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZNF609O15014 1411 aa8.7□□□□□ -1.02
CHCHD3P1-201ENST00000425516 APBB1O00213 710 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 SMARCA5O60264 1052 aaPredicted RBP8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 SLC5A1P13866 664 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 IL1R1P14778 569 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 GYG1P46976 350 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 KCNJ4P48050 445 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 PODNQ7Z5L7 613 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 TDRD7Q8NHU6 1098 aaKnown RBP8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 XAGE2Q96GT9 111 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 COA1Q9GZY4 146 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CD209Q9NNX6 404 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 KCNQ5Q9NR82 932 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms