RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
HLA-DQB3-203ENST00000425319 TEKT1Q969V4 418 aa15.43■□□□□ 0.06
HLA-DQB3-203ENST00000425319 CCL15-CCL14A0A0B4J2E2 113 aa15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 GNRH1P01148 92 aa15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 HOXD10P28358 340 aa15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 CCL15Q16663 113 aa15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 SLC9C1Q4G0N8 1177 aa15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 METTL24Q5JXM2 366 aa15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 FAM84BQ96KN1 310 aaPredicted RBP15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 MRIQ9BWK5 157 aa15.42■□□□□ 0.06
HLA-DQB3-203ENST00000425319 IFIT1P09914 478 aaKnown RBP15.41■□□□□ 0.06
HLA-DQB3-203ENST00000425319 PRMT2P55345 433 aa15.41■□□□□ 0.06
HLA-DQB3-203ENST00000425319 CHAF1AQ13111 956 aaPredicted RBP15.41■□□□□ 0.06
HLA-DQB3-203ENST00000425319 PSME4Q14997 1843 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 SNAPC2Q13487 334 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 ERO1BQ86YB8 467 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 ARMC5Q96C12 935 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 ZCCHC17Q9NP64 241 aaKnown RBP15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 SUGT1Q9Y2Z0 365 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 PCDHAC2Q9Y5I4 1007 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 IRS2Q9Y4H2 1338 aa15.4■□□□□ 0.06
HLA-DQB3-203ENST00000425319 EPHA10Q5JZY3 1008 aa15.38■□□□□ 0.05
HLA-DQB3-203ENST00000425319 FAM83AQ86UY5 434 aa15.38■□□□□ 0.05
HLA-DQB3-203ENST00000425319 MS4A4AQ96JQ5 239 aa15.38■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PTPN18Q99952 460 aa15.38■□□□□ 0.05
HLA-DQB3-203ENST00000425319 TMEM39BQ9GZU3 492 aa15.38■□□□□ 0.05
HLA-DQB3-203ENST00000425319 GNL3LQ9NVN8 582 aaKnown RBP15.38■□□□□ 0.05
HLA-DQB3-203ENST00000425319 RIPOR2Q9Y4F9 1068 aa15.38■□□□□ 0.05
HLA-DQB3-203ENST00000425319 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 TLR2O60603 784 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PDE8BO95263 885 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 GJA5P36382 358 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 VGLL4Q14135 290 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 CCDC184Q52MB2 194 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 HABP4Q5JVS0 413 aaKnown RBP15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 FKBP1CQ5VVH2 108 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 WDR66Q8TBY9 1149 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 WRNIP1Q96S55 665 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 ZNF341Q9BYN7 854 aa15.37■□□□□ 0.05
HLA-DQB3-203ENST00000425319 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 EN2P19622 333 aaPredicted RBP15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 NKX2-3Q8TAU0 364 aa15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 BRI3BPQ8WY22 251 aa15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 SUCLG2Q96I99 432 aa15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 ZDHHC15Q96MV8 337 aa15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PUS3Q9BZE2 481 aaKnown RBP15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 IQSEC3Q9UPP2 1182 aaPredicted RBP15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 MYH3P11055 1940 aa15.36■□□□□ 0.05
HLA-DQB3-203ENST00000425319 SLC5A1P13866 664 aa15.35■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PPATQ06203 517 aa15.35■□□□□ 0.05
HLA-DQB3-203ENST00000425319 HHIPL2Q6UWX4 724 aa15.35■□□□□ 0.05
HLA-DQB3-203ENST00000425319 FAM9BQ8IZU0 186 aa15.35■□□□□ 0.05
HLA-DQB3-203ENST00000425319 TEPSINQ96N21 525 aa15.35■□□□□ 0.05
HLA-DQB3-203ENST00000425319 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PPIL2Q13356 520 aa15.34■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PUM3Q15397 648 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB3-203ENST00000425319 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
HLA-DQB3-203ENST00000425319 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
HLA-DQB3-203ENST00000425319 PTPRCP08575 1304 aa15.34■□□□□ 0.05
HLA-DQB3-203ENST00000425319 FMNL1O95466 1100 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB3-203ENST00000425319 FAM43AQ8N2R8 423 aa15.33■□□□□ 0.04
HLA-DQB3-203ENST00000425319 RAET1EQ8TD07 263 aa15.33■□□□□ 0.04
HLA-DQB3-203ENST00000425319 TRIM47Q96LD4 638 aa15.33■□□□□ 0.04
HLA-DQB3-203ENST00000425319 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB3-203ENST00000425319 PTCH2Q9Y6C5 1203 aa15.33■□□□□ 0.04
HLA-DQB3-203ENST00000425319 BCAMP50895 628 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 UBXN2AP68543 259 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 RABL6Q3YEC7 729 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 FAM151AQ8WW52 585 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 LPIN2Q92539 896 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 ZKSCAN4Q969J2 545 aaPredicted RBP15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 UTYO14607 1347 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SSC5DA1L4H1 1573 aa15.32■□□□□ 0.04
HLA-DQB3-203ENST00000425319 BTBD19C9JJ37 291 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 IRF6O14896 467 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 MYCP01106 439 aaPredicted RBP15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 CAPN2P17655 700 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 CACNB3P54284 484 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 ANKRD23Q86SG2 305 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 ZGPATQ8N5A5 531 aaKnown RBP15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 DPF3Q92784 378 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 HTATIP2Q9BUP3 242 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 CEP126Q9P2H0 1117 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 PDE4DIPQ5VU43 2346 aa15.31■□□□□ 0.04
HLA-DQB3-203ENST00000425319 LDHBP07195 334 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB3-203ENST00000425319 PSMC4P43686 418 aa15.3■□□□□ 0.04
HLA-DQB3-203ENST00000425319 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
HLA-DQB3-203ENST00000425319 FASTKD5Q7L8L6 764 aaKnown RBP15.3■□□□□ 0.04
HLA-DQB3-203ENST00000425319 FBXO3Q9UK99 471 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms