RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 VEZTQ9HBM0 779 aa16.32■□□□□ 0.2
VRK3-203ENST00000424804 IQSEC3Q9UPP2 1182 aaPredicted RBP16.32■□□□□ 0.2
VRK3-203ENST00000424804 PPP1R12BO60237 982 aaPredicted RBP16.31■□□□□ 0.2
VRK3-203ENST00000424804 ZBTB48P10074 688 aaPredicted RBP16.31■□□□□ 0.2
VRK3-203ENST00000424804 CRKP46108 304 aa16.31■□□□□ 0.2
VRK3-203ENST00000424804 BCAMP50895 628 aa16.31■□□□□ 0.2
VRK3-203ENST00000424804 CAP1Q01518 475 aa16.31■□□□□ 0.2
VRK3-203ENST00000424804 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
VRK3-203ENST00000424804 PTPN18Q99952 460 aa16.31■□□□□ 0.2
VRK3-203ENST00000424804 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
VRK3-203ENST00000424804 MANSC4A6NHS7 340 aaPredicted RBP16.3■□□□□ 0.2
VRK3-203ENST00000424804 MYO1BO43795 1136 aa16.3■□□□□ 0.2
VRK3-203ENST00000424804 RBM5P52756 815 aaKnown RBP eCLIP16.3■□□□□ 0.2
VRK3-203ENST00000424804 INHBEP58166 350 aa16.3■□□□□ 0.2
VRK3-203ENST00000424804 PKN2Q16513 984 aaKnown RBP16.3■□□□□ 0.2
VRK3-203ENST00000424804 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.3■□□□□ 0.2
VRK3-203ENST00000424804 FKTNO75072 461 aa16.29■□□□□ 0.2
VRK3-203ENST00000424804 METTL24Q5JXM2 366 aa16.29■□□□□ 0.2
VRK3-203ENST00000424804 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
VRK3-203ENST00000424804 MS4A4AQ96JQ5 239 aa16.29■□□□□ 0.2
VRK3-203ENST00000424804 MRIQ9BWK5 157 aa16.29■□□□□ 0.2
VRK3-203ENST00000424804 TMEM39BQ9GZU3 492 aa16.29■□□□□ 0.2
VRK3-203ENST00000424804 HDLBPQ00341 1268 aaKnown RBP16.28■□□□□ 0.2
VRK3-203ENST00000424804 ALDH1L2Q3SY69 923 aa16.28■□□□□ 0.2
VRK3-203ENST00000424804 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
VRK3-203ENST00000424804 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
VRK3-203ENST00000424804 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
VRK3-203ENST00000424804 KIF16BQ96L93 1317 aa16.27■□□□□ 0.2
VRK3-203ENST00000424804 TCP10L2B9ZVM9 353 aa16.27■□□□□ 0.2
VRK3-203ENST00000424804 ALDH1A1P00352 501 aa16.27■□□□□ 0.2
VRK3-203ENST00000424804 IREB2P48200 963 aaKnown RBP16.27■□□□□ 0.2
VRK3-203ENST00000424804 CHAF1AQ13111 956 aaPredicted RBP16.27■□□□□ 0.2
VRK3-203ENST00000424804 APOBEC3HQ6NTF7 200 aaKnown RBP16.27■□□□□ 0.2
VRK3-203ENST00000424804 FBXO46Q6PJ61 603 aaPredicted RBP16.27■□□□□ 0.2
VRK3-203ENST00000424804 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
VRK3-203ENST00000424804 CENPFP49454 3210 aa16.27■□□□□ 0.19
VRK3-203ENST00000424804 EYA2O00167 538 aa16.26■□□□□ 0.19
VRK3-203ENST00000424804 SLC34A2O95436 690 aa16.26■□□□□ 0.19
VRK3-203ENST00000424804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.19
VRK3-203ENST00000424804 CACNB3P54284 484 aa16.25■□□□□ 0.19
VRK3-203ENST00000424804 TNFAIP1Q13829 316 aa16.25■□□□□ 0.19
VRK3-203ENST00000424804 CAVIN4Q5BKX8 364 aa16.25■□□□□ 0.19
VRK3-203ENST00000424804 TBC1D22AQ8WUA7 517 aa16.25■□□□□ 0.19
VRK3-203ENST00000424804 OPTNQ96CV9 577 aa16.25■□□□□ 0.19
VRK3-203ENST00000424804 ZDHHC15Q96MV8 337 aa16.25■□□□□ 0.19
VRK3-203ENST00000424804 ELP3Q9H9T3 547 aa16.25■□□□□ 0.19
VRK3-203ENST00000424804 CRHR2Q13324 411 aa16.24■□□□□ 0.19
VRK3-203ENST00000424804 VGLL4Q14135 290 aa16.24■□□□□ 0.19
VRK3-203ENST00000424804 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
VRK3-203ENST00000424804 OTOP1Q7RTM1 612 aa16.24■□□□□ 0.19
VRK3-203ENST00000424804 BRI3BPQ8WY22 251 aa16.24■□□□□ 0.19
VRK3-203ENST00000424804 MYH13Q9UKX3 1938 aa16.23■□□□□ 0.19
VRK3-203ENST00000424804 BRCA2P51587 3418 aa16.23■□□□□ 0.19
VRK3-203ENST00000424804 MKI67P46013 3256 aaKnown RBP16.23■□□□□ 0.19
VRK3-203ENST00000424804 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
VRK3-203ENST00000424804 HHIPL2Q6UWX4 724 aa16.23■□□□□ 0.19
VRK3-203ENST00000424804 VPS37DQ86XT2 251 aa16.23■□□□□ 0.19
VRK3-203ENST00000424804 TEKT1Q969V4 418 aa16.23■□□□□ 0.19
VRK3-203ENST00000424804 NOB1Q9ULX3 412 aaKnown RBP16.23■□□□□ 0.19
VRK3-203ENST00000424804 SUGT1Q9Y2Z0 365 aa16.23■□□□□ 0.19
VRK3-203ENST00000424804 FKBP1CQ5VVH2 108 aa16.22■□□□□ 0.19
VRK3-203ENST00000424804 FAM83AQ86UY5 434 aa16.22■□□□□ 0.19
VRK3-203ENST00000424804 LPIN2Q92539 896 aa16.22■□□□□ 0.19
VRK3-203ENST00000424804 SNCAIPQ9Y6H5 919 aa16.22■□□□□ 0.19
VRK3-203ENST00000424804 ZBTB22O15209 634 aa16.21■□□□□ 0.19
VRK3-203ENST00000424804 IFIT1P09914 478 aaKnown RBP16.21■□□□□ 0.19
VRK3-203ENST00000424804 CD99L2Q8TCZ2 262 aa16.21■□□□□ 0.19
VRK3-203ENST00000424804 TRIM17Q9Y577 477 aa16.21■□□□□ 0.19
VRK3-203ENST00000424804 KIAA0100Q14667 2235 aaKnown RBP16.21■□□□□ 0.18
VRK3-203ENST00000424804 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
VRK3-203ENST00000424804 CIAO1O76071 339 aa16.2■□□□□ 0.18
VRK3-203ENST00000424804 CT47B1P0C2W7 299 aaPredicted RBP16.2■□□□□ 0.18
VRK3-203ENST00000424804 TNNI2P48788 182 aa16.2■□□□□ 0.18
VRK3-203ENST00000424804 FAM43AQ8N2R8 423 aa16.2■□□□□ 0.18
VRK3-203ENST00000424804 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
VRK3-203ENST00000424804 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
VRK3-203ENST00000424804 PTPN22Q9Y2R2 807 aa16.2■□□□□ 0.18
VRK3-203ENST00000424804 SPDYE5A6NIY4 337 aa16.19■□□□□ 0.18
VRK3-203ENST00000424804 SLC5A1P13866 664 aa16.19■□□□□ 0.18
VRK3-203ENST00000424804 RARSP54136 660 aaKnown RBP16.19■□□□□ 0.18
VRK3-203ENST00000424804 ZKSCAN4Q969J2 545 aaPredicted RBP16.19■□□□□ 0.18
VRK3-203ENST00000424804 DAGLAQ9Y4D2 1042 aa16.19■□□□□ 0.18
VRK3-203ENST00000424804 LRRFIP2Q9Y608 721 aaKnown RBP16.19■□□□□ 0.18
VRK3-203ENST00000424804 RPAP1Q9BWH6 1393 aaPredicted RBP16.18■□□□□ 0.18
VRK3-203ENST00000424804 CCL15-CCL14A0A0B4J2E2 113 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 UBTFL1P0CB47 393 aaPredicted RBP16.18■□□□□ 0.18
VRK3-203ENST00000424804 PRDX5P30044 214 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 SP3Q02447 781 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 DIXDC1Q155Q3 683 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 CCL15Q16663 113 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 CDC42EP5Q6NZY7 148 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 WDR66Q8TBY9 1149 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 MEIS3Q99687 375 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 SIL1Q9H173 461 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 ZNF112Q9UJU3 913 aa16.18■□□□□ 0.18
VRK3-203ENST00000424804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.18■□□□□ 0.18
VRK3-203ENST00000424804 ZSWIM8A7E2V4 1837 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 POTEFA5A3E0 1075 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 PHKA1P46020 1223 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms