RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 TERF2Q15554 542 aa13.71□□□□□ -0.21
ERCC1-204ENST00000423698 IMMTQ16891 758 aaKnown RBP13.71□□□□□ -0.21
ERCC1-204ENST00000423698 C8orf76Q96K31 380 aa13.71□□□□□ -0.21
ERCC1-204ENST00000423698 PIH1D3Q9NQM4 214 aaKnown RBP13.71□□□□□ -0.21
ERCC1-204ENST00000423698 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
ERCC1-204ENST00000423698 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
ERCC1-204ENST00000423698 IRS4O14654 1257 aaPredicted RBP13.7□□□□□ -0.22
ERCC1-204ENST00000423698 PRKAB2O43741 272 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 CAPN2P17655 700 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
ERCC1-204ENST00000423698 CCDC112Q8NEF3 446 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.7□□□□□ -0.22
ERCC1-204ENST00000423698 KIF28PB7ZC32 967 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 NDUFA8P51970 172 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 UVSSAQ2YD98 709 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 SLC4A9Q96Q91 983 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 FEZ1Q99689 392 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 ATG3Q9NT62 314 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 DDX41Q9UJV9 622 aaKnown RBP13.7□□□□□ -0.22
ERCC1-204ENST00000423698 CFAP45Q9UL16 551 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 PCDHA7Q9UN72 937 aa13.7□□□□□ -0.22
ERCC1-204ENST00000423698 CTIFO43310 598 aaKnown RBP13.69□□□□□ -0.22
ERCC1-204ENST00000423698 EXOSC10Q01780 885 aaKnown RBP13.69□□□□□ -0.22
ERCC1-204ENST00000423698 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
ERCC1-204ENST00000423698 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
ERCC1-204ENST00000423698 KMT5BQ4FZB7 885 aa13.69□□□□□ -0.22
ERCC1-204ENST00000423698 TBC1D10CQ8IV04 446 aa13.69□□□□□ -0.22
ERCC1-204ENST00000423698 KIF18AQ8NI77 898 aa13.69□□□□□ -0.22
ERCC1-204ENST00000423698 CACTINQ8WUQ7 758 aaKnown RBP13.69□□□□□ -0.22
ERCC1-204ENST00000423698 HELLSQ9NRZ9 838 aa13.69□□□□□ -0.22
ERCC1-204ENST00000423698 ABCF2Q9UG63 623 aa13.69□□□□□ -0.22
ERCC1-204ENST00000423698 USP27XA6NNY8 438 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 CLGNO14967 610 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 ANTXR2P58335 489 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 ZRSR1Q15695 479 aaKnown RBP13.68□□□□□ -0.22
ERCC1-204ENST00000423698 CYB5R4Q7L1T6 521 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 CLIC6Q96NY7 704 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 ARMT1Q9H993 441 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 ZNF215Q9UL58 517 aaPredicted RBP13.68□□□□□ -0.22
ERCC1-204ENST00000423698 MTMR7Q9Y216 660 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 ZNF532Q9HCE3 1301 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 AFDNP55196 1824 aaKnown RBP13.68□□□□□ -0.22
ERCC1-204ENST00000423698 CARMIL3Q8ND23 1372 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 ELF2Q15723 593 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.222e-26■■■■■ 29.9
ERCC1-204ENST00000423698 DDX19AQ9NUU7 478 aaKnown RBP13.68□□□□□ -0.22
ERCC1-204ENST00000423698 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 SMC2O95347 1197 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 ZNF75DP51815 510 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 TTLL11Q8NHH1 800 aa13.68□□□□□ -0.22
ERCC1-204ENST00000423698 SH3TC1Q8TE82 1336 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 STARD3NLO95772 234 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 MAGEB6Q8N7X4 407 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 NUP133Q8WUM0 1156 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 BCAMP50895 628 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 TRDNQ13061 729 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 DPCR1Q3MIW9 517 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 TSGA10IPQ3SY00 556 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 SYNE3Q6ZMZ3 975 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
ERCC1-204ENST00000423698 PHRF1Q9P1Y6 1649 aaKnown RBP13.67□□□□□ -0.22
ERCC1-204ENST00000423698 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 POLR3GO15318 223 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-204ENST00000423698 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
ERCC1-204ENST00000423698 AIDAQ96BJ3 306 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 ANKRD18BA2A2Z9 1011 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 MINDY4BA8MYZ0 360 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 CNPY4Q8N129 248 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 KRT222Q8N1A0 295 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 PDILTQ8N807 584 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 KCNJ14Q9UNX9 436 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 GOLGA6L6A8MZA4 724 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 PRDM1O75626 825 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 LMOD1P29536 600 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-204ENST00000423698 CDC27P30260 824 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
ERCC1-204ENST00000423698 FAM182BQ5T319 152 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 CCDC102BQ68D86 513 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 SMARCC2Q8TAQ2 1214 aa13.66□□□□□ -0.22
ERCC1-204ENST00000423698 OVOS2A0A0G2JMS6 1433 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 BAZ2BQ9UIF8 2168 aaKnown RBP13.65□□□□□ -0.22
ERCC1-204ENST00000423698 CCDC66A2RUB6 948 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 MBD4O95243 580 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 ZSCAN25Q6NSZ9 544 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 FBXO38Q6PIJ6 1188 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-204ENST00000423698 HPS5Q9UPZ3 1129 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 HMGB1P09429 215 aaKnown RBP13.65□□□□□ -0.22
ERCC1-204ENST00000423698 GABPB1Q06547 395 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-204ENST00000423698 ZBTB38Q8NAP3 1195 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-204ENST00000423698 NCOA7Q8NI08 942 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 SLC26A6Q9BXS9 759 aa13.65□□□□□ -0.22
ERCC1-204ENST00000423698 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms