RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
PDGFC-202ENST00000422544 MYO3BQ8WXR4 1341 aa11.34□□□□□ -0.59
PDGFC-202ENST00000422544 COL1A1P02452 1464 aaPredicted RBP11.33□□□□□ -0.6
PDGFC-202ENST00000422544 CNTNAP1P78357 1384 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 ZNF280AP59817 542 aaPredicted RBP11.33□□□□□ -0.6
PDGFC-202ENST00000422544 TBC1D10BQ4KMP7 808 aaPredicted RBP11.33□□□□□ -0.6
PDGFC-202ENST00000422544 TSHZ3Q63HK5 1081 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 TBC1D9Q6ZT07 1266 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 OGFOD1Q8N543 542 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 ECHDC1Q9NTX5 307 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 ABCF2Q9UG63 623 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 NDUFB9Q9Y6M9 179 aa11.33□□□□□ -0.6
PDGFC-202ENST00000422544 CASP8AP2Q9UKL3 1982 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 EGFRP00533 1210 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 ATP5JP18859 108 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 ZAP70P43403 619 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 EAPPQ56P03 285 aaPredicted RBP11.32□□□□□ -0.6
PDGFC-202ENST00000422544 TRPM4Q8TD43 1214 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 CCDC136Q96JN2 1154 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 BOLA2Q9H3K6 86 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 ADARB2Q9NS39 739 aaKnown RBP11.32□□□□□ -0.6
PDGFC-202ENST00000422544 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
PDGFC-202ENST00000422544 PDS5AQ29RF7 1337 aaKnown RBP11.32□□□□□ -0.6
PDGFC-202ENST00000422544 SALL1Q9NSC2 1324 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 TRPM7Q96QT4 1865 aa11.32□□□□□ -0.6
PDGFC-202ENST00000422544 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
PDGFC-202ENST00000422544 CYP2E1P05181 493 aaPredicted RBP11.31□□□□□ -0.6
PDGFC-202ENST00000422544 LDHBP07195 334 aaKnown RBP11.31□□□□□ -0.6
PDGFC-202ENST00000422544 PRDX5P30044 214 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 HIRAP54198 1017 aaPredicted RBP11.31□□□□□ -0.6
PDGFC-202ENST00000422544 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 ZGPATQ8N5A5 531 aaKnown RBP11.31□□□□□ -0.6
PDGFC-202ENST00000422544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDGFC-202ENST00000422544 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 DNAJC2Q99543 621 aaKnown RBP11.31□□□□□ -0.6
PDGFC-202ENST00000422544 ANTXR1Q9H6X2 564 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 MYOZ2Q9NPC6 264 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
PDGFC-202ENST00000422544 MX1P20591 662 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 VEGFBP49765 207 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 RBM5P52756 815 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDGFC-202ENST00000422544 KIF4BQ2VIQ3 1234 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 SPTY2D1Q68D10 685 aaPredicted RBP11.3□□□□□ -0.6
PDGFC-202ENST00000422544 USP50Q70EL3 339 aaPredicted RBP11.3□□□□□ -0.6
PDGFC-202ENST00000422544 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 CENPQQ7L2Z9 268 aaPredicted RBP11.3□□□□□ -0.6
PDGFC-202ENST00000422544 PNMA8AQ86V59 439 aaPredicted RBP11.3□□□□□ -0.6
PDGFC-202ENST00000422544 EDC3Q96F86 508 aaKnown RBP11.3□□□□□ -0.6
PDGFC-202ENST00000422544 HAUS7Q99871 368 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 PIH1D3Q9NQM4 214 aaKnown RBP11.3□□□□□ -0.6
PDGFC-202ENST00000422544 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 PPP4R2Q9NY27 417 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 PCDHAC2Q9Y5I4 1007 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 SALL3Q9BXA9 1300 aa11.3□□□□□ -0.6
PDGFC-202ENST00000422544 GOLIM4O00461 696 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 CRKP46108 304 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 MMP14P50281 582 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 DLGAP5Q15398 846 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 SERPINA10Q9UK55 444 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 TTC41PQ6P2S7 1318 aa11.29□□□□□ -0.6
PDGFC-202ENST00000422544 ERC2O15083 957 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 MAP4K4O95819 1239 aaPredicted RBP11.28□□□□□ -0.6
PDGFC-202ENST00000422544 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
PDGFC-202ENST00000422544 PDE4AP27815 886 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 PDE1AP54750 535 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
PDGFC-202ENST00000422544 MECOMQ03112 1051 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 DZIP1Q86YF9 867 aaKnown RBP11.28□□□□□ -0.6
PDGFC-202ENST00000422544 PLEKHM2Q8IWE5 1019 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 PI4K2BQ8TCG2 481 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 TEKT1Q969V4 418 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 PRMT6Q96LA8 375 aaPredicted RBP11.28□□□□□ -0.6
PDGFC-202ENST00000422544 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 PAG1Q9NWQ8 432 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 STAP2Q9UGK3 403 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 ARAP2Q8WZ64 1704 aa11.28□□□□□ -0.6
PDGFC-202ENST00000422544 ASTN2O75129 1339 aaPredicted RBP11.28□□□□□ -0.6
PDGFC-202ENST00000422544 SPDYE2BA6NHP3 402 aa11.27□□□□□ -0.61
PDGFC-202ENST00000422544 WNT10BO00744 389 aa11.27□□□□□ -0.61
PDGFC-202ENST00000422544 IDH1O75874 414 aaKnown RBP11.27□□□□□ -0.61
PDGFC-202ENST00000422544 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.61
PDGFC-202ENST00000422544 SPDYE6P0CI01 402 aa11.27□□□□□ -0.61
PDGFC-202ENST00000422544 LBX1P52954 281 aa11.27□□□□□ -0.61
PDGFC-202ENST00000422544 TTF1Q15361 905 aaPredicted RBP11.27□□□□□ -0.61
PDGFC-202ENST00000422544 MAP1SQ66K74 1059 aaPredicted RBP11.27□□□□□ -0.61
PDGFC-202ENST00000422544 HHIPL2Q6UWX4 724 aa11.27□□□□□ -0.61
PDGFC-202ENST00000422544 LDHDQ86WU2 507 aa11.27□□□□□ -0.61
PDGFC-202ENST00000422544 MTMR14Q8NCE2 650 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms