RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 DHX40Q8IX18 779 aaKnown RBP16.02■□□□□ 0.16
CTCFL-203ENST00000422109 LINC00301Q8NCQ3 95 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 ANO10Q9NW15 660 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.16
CTCFL-203ENST00000422109 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
CTCFL-203ENST00000422109 CBX1P83916 185 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 MYSM1Q5VVJ2 828 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 CMTR1Q8N1G2 835 aaKnown RBP16.02■□□□□ 0.16
CTCFL-203ENST00000422109 FBXO18Q8NFZ0 1043 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 ALG1Q9BT22 464 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.161e-6■□□□□ 10.8
CTCFL-203ENST00000422109 RIPOR2Q9Y4F9 1068 aa16.02■□□□□ 0.16
CTCFL-203ENST00000422109 KCPQ6ZWJ8 1503 aa16.02■□□□□ 0.15
CTCFL-203ENST00000422109 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.15
CTCFL-203ENST00000422109 ATP2B1P20020 1258 aa16.02■□□□□ 0.15
CTCFL-203ENST00000422109 METAP2P50579 478 aaKnown RBP eCLIP16.02■□□□□ 0.153e-6■□□□□ 9.1
CTCFL-203ENST00000422109 HSP90AA4PQ58FG1 418 aa16.02■□□□□ 0.15
CTCFL-203ENST00000422109 SPECC1Q5M775 1068 aa16.02■□□□□ 0.15
CTCFL-203ENST00000422109 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.15
CTCFL-203ENST00000422109 NBPF3Q9H094 633 aa16.02■□□□□ 0.15
CTCFL-203ENST00000422109 COL5A2P05997 1499 aaPredicted RBP16.02■□□□□ 0.15
CTCFL-203ENST00000422109 CTSWP56202 376 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 CCDC102BQ68D86 513 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 FMR1NBQ8N0W7 255 aaPredicted RBP16.01■□□□□ 0.15
CTCFL-203ENST00000422109 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.01■□□□□ 0.15
CTCFL-203ENST00000422109 V9GYY5 206 aaPredicted RBP16.01■□□□□ 0.15
CTCFL-203ENST00000422109 GLI3P10071 1580 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 MAP3K15Q6ZN16 1313 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 CTAGE5O15320 804 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 DHX16O60231 1041 aaKnown RBP16.01■□□□□ 0.15
CTCFL-203ENST00000422109 CDC27P30260 824 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 PPP4R3BQ5MIZ7 849 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 AIDAQ96BJ3 306 aa16.01■□□□□ 0.15
CTCFL-203ENST00000422109 SKILP12757 684 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 ADD2P35612 726 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
CTCFL-203ENST00000422109 CLIC6Q96NY7 704 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 CCDC69A6NI79 296 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 LRRC8AQ8IWT6 810 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 MAGEB6Q8N7X4 407 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 MAP7D2Q96T17 732 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 ARMT1Q9H993 441 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 RTEL1Q9NZ71 1219 aa16■□□□□ 0.15
CTCFL-203ENST00000422109 PRKAB2O43741 272 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 ZNF202O95125 648 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 CSF1RP07333 972 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 ADALQ6DHV7 355 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 ACSBG1Q96GR2 724 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 SEC31BQ9NQW1 1179 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 TJP1Q07157 1748 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 LMTK3Q96Q04 1460 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 NPHP1O15259 732 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 WDHD1O75717 1129 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-203ENST00000422109 SLC3A2P08195 630 aaKnown RBP15.99■□□□□ 0.15
CTCFL-203ENST00000422109 PDE6AP16499 860 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 LMOD1P29536 600 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-203ENST00000422109 DZIP3Q86Y13 1208 aaKnown RBP15.99■□□□□ 0.15
CTCFL-203ENST00000422109 MIGA1Q8NAN2 632 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 NEDD4P46934 1319 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
CTCFL-203ENST00000422109 ANO1Q5XXA6 986 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 IFNKQ9P0W0 207 aa15.99■□□□□ 0.15
CTCFL-203ENST00000422109 MBD4O95243 580 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 PFKFB1P16118 471 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 TMEM67Q5HYA8 995 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 SLC26A6Q9BXS9 759 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 ANGEL1Q9UNK9 670 aaKnown RBP15.98■□□□□ 0.15
CTCFL-203ENST00000422109 PDE8BO95263 885 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 KRT40Q6A162 431 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 TMC6Q7Z403 805 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 VPS37DQ86XT2 251 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTCFL-203ENST00000422109 KIAA1468Q9P260 1216 aa15.98■□□□□ 0.15
CTCFL-203ENST00000422109 GOLGA8AA7E2F4 631 aa15.97■□□□□ 0.15
CTCFL-203ENST00000422109 MROH7-TTC4A0A0A0MT08 1334 aa15.97■□□□□ 0.15
CTCFL-203ENST00000422109 LAMB4A4D0S4 1761 aa15.97■□□□□ 0.15
CTCFL-203ENST00000422109 RIC1Q4ADV7 1423 aa15.97■□□□□ 0.15
CTCFL-203ENST00000422109 IFIT3O14879 490 aaKnown RBP15.97■□□□□ 0.15
CTCFL-203ENST00000422109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.97■□□□□ 0.15
CTCFL-203ENST00000422109 KCNG4Q8TDN1 519 aa15.97■□□□□ 0.15
CTCFL-203ENST00000422109 NAPBQ9H115 298 aa15.97■□□□□ 0.15
CTCFL-203ENST00000422109 U2AF2P26368 475 aaKnown RBP eCLIP15.96■□□□□ 0.15
CTCFL-203ENST00000422109 PDCL2Q8N4E4 241 aa15.96■□□□□ 0.15
CTCFL-203ENST00000422109 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
CTCFL-203ENST00000422109 NAT10Q9H0A0 1025 aaKnown RBP15.96■□□□□ 0.15
CTCFL-203ENST00000422109 ZBTB43O43298 467 aa15.96■□□□□ 0.15
CTCFL-203ENST00000422109 APOA5Q6Q788 366 aa15.96■□□□□ 0.15
CTCFL-203ENST00000422109 NUP133Q8WUM0 1156 aa15.96■□□□□ 0.15
CTCFL-203ENST00000422109 MPHOSPH8Q99549 860 aa15.96■□□□□ 0.15
CTCFL-203ENST00000422109 KCNJ14Q9UNX9 436 aa15.96■□□□□ 0.15
CTCFL-203ENST00000422109 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.14
CTCFL-203ENST00000422109 BCAMP50895 628 aa15.96■□□□□ 0.14
CTCFL-203ENST00000422109 GOLGA8FQ08AF8 430 aa15.96■□□□□ 0.14
CTCFL-203ENST00000422109 GOLGA8DPQ0D2H9 430 aa15.96■□□□□ 0.14
CTCFL-203ENST00000422109 PNOCQ13519 176 aa15.96■□□□□ 0.14
CTCFL-203ENST00000422109 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms