RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 MICALL2Q8IY33 904 aa21.28■■□□□ 1
LINC00271-201ENST00000421378 HDAC9Q9UKV0 1011 aa21.28■■□□□ 1
LINC00271-201ENST00000421378 MYO5AQ9Y4I1 1855 aaKnown RBP21.28■■□□□ 1
LINC00271-201ENST00000421378 TRIM6-TRIM34B2RNG4 842 aa21.27■■□□□ 1
LINC00271-201ENST00000421378 MAP3K12Q12852 859 aa21.27■■□□□ 1
LINC00271-201ENST00000421378 CNOT7Q9UIV1 285 aaKnown RBP21.27■■□□□ 1
LINC00271-201ENST00000421378 IGSF3O75054 1194 aa21.27■□□□□ 0.99
LINC00271-201ENST00000421378 GSPT1P15170 499 aaKnown RBP21.27■□□□□ 0.99
LINC00271-201ENST00000421378 MMP14P50281 582 aa21.27■□□□□ 0.99
LINC00271-201ENST00000421378 MECOMQ03112 1051 aa21.27■□□□□ 0.99
LINC00271-201ENST00000421378 CNTROBQ8N137 903 aa21.27■□□□□ 0.99
LINC00271-201ENST00000421378 KBTBD3Q8NAB2 608 aa21.27■□□□□ 0.99
LINC00271-201ENST00000421378 EVI5LQ96CN4 794 aa21.27■□□□□ 0.99
LINC00271-201ENST00000421378 SCN4AP35499 1836 aa21.26■□□□□ 0.99
LINC00271-201ENST00000421378 SHTN1A0MZ66 631 aa21.26■□□□□ 0.99
LINC00271-201ENST00000421378 IQCA1LA6NCM1 817 aa21.26■□□□□ 0.99
LINC00271-201ENST00000421378 ZNF526Q8TF50 670 aaPredicted RBP21.26■□□□□ 0.99
LINC00271-201ENST00000421378 NSUN4Q96CB9 384 aaKnown RBP21.26■□□□□ 0.99
LINC00271-201ENST00000421378 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.26■□□□□ 0.99
LINC00271-201ENST00000421378 H7C1D1 291 aa21.25■□□□□ 0.99
LINC00271-201ENST00000421378 EPS15P42566 896 aa21.25■□□□□ 0.99
LINC00271-201ENST00000421378 ZNF280AP59817 542 aaPredicted RBP21.25■□□□□ 0.99
LINC00271-201ENST00000421378 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
LINC00271-201ENST00000421378 FSD1Q9BTV5 496 aa21.25■□□□□ 0.99
LINC00271-201ENST00000421378 HACL1Q9UJ83 578 aa21.25■□□□□ 0.99
LINC00271-201ENST00000421378 SERPINA10Q9UK55 444 aa21.25■□□□□ 0.99
LINC00271-201ENST00000421378 HDLBPQ00341 1268 aaKnown RBP21.24■□□□□ 0.99
LINC00271-201ENST00000421378 DIXDC1Q155Q3 683 aa21.24■□□□□ 0.99
LINC00271-201ENST00000421378 SLF2Q8IX21 1173 aa21.24■□□□□ 0.99
LINC00271-201ENST00000421378 TEKT1Q969V4 418 aa21.24■□□□□ 0.99
LINC00271-201ENST00000421378 MYOZ2Q9NPC6 264 aa21.24■□□□□ 0.99
LINC00271-201ENST00000421378 CRKP46108 304 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 GSTO1P78417 241 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 SLC9C2Q5TAH2 1124 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 NAA16Q6N069 864 aaPredicted RBP21.23■□□□□ 0.99
LINC00271-201ENST00000421378 MAGEB6Q8N7X4 407 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 ZNF384Q8TF68 577 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 MYH7P12883 1935 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 AK9Q5TCS8 1911 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 ADAMTSL1Q8N6G6 1762 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 YY1P25490 414 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 RBM5P52756 815 aaKnown RBP eCLIP21.23■□□□□ 0.99
LINC00271-201ENST00000421378 LRRFIP1Q32MZ4 808 aaKnown RBP21.23■□□□□ 0.99
LINC00271-201ENST00000421378 ZSCAN25Q6NSZ9 544 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 TMED8Q6PL24 325 aaPredicted RBP21.23■□□□□ 0.99
LINC00271-201ENST00000421378 MRIQ9BWK5 157 aa21.23■□□□□ 0.99
LINC00271-201ENST00000421378 ADARB2Q9NS39 739 aaKnown RBP21.23■□□□□ 0.99
LINC00271-201ENST00000421378 MYH2Q9UKX2 1941 aa21.22■□□□□ 0.99
LINC00271-201ENST00000421378 PDE6AP16499 860 aa21.22■□□□□ 0.99
LINC00271-201ENST00000421378 SDSP20132 328 aa21.22■□□□□ 0.99
LINC00271-201ENST00000421378 CFAP100Q494V2 611 aa21.22■□□□□ 0.99
LINC00271-201ENST00000421378 BMP2KLQ5H9B9 411 aa21.22■□□□□ 0.99
LINC00271-201ENST00000421378 HHIPL2Q6UWX4 724 aa21.22■□□□□ 0.99
LINC00271-201ENST00000421378 SAMD7Q7Z3H4 446 aa21.22■□□□□ 0.99
LINC00271-201ENST00000421378 MROH7-TTC4A0A0A0MT08 1334 aa21.21■□□□□ 0.99
LINC00271-201ENST00000421378 POTECB2RU33 542 aa21.21■□□□□ 0.99
LINC00271-201ENST00000421378 EGFRP00533 1210 aa21.21■□□□□ 0.99
LINC00271-201ENST00000421378 EPHX2P34913 555 aa21.21■□□□□ 0.99
LINC00271-201ENST00000421378 DLGAP5Q15398 846 aa21.21■□□□□ 0.99
LINC00271-201ENST00000421378 KIF4BQ2VIQ3 1234 aa21.21■□□□□ 0.99
LINC00271-201ENST00000421378 GAKO14976 1311 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 LDHCP07864 332 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 ZFYP08048 801 aaPredicted RBP21.2■□□□□ 0.98
LINC00271-201ENST00000421378 VEGFAP15692 232 aaPredicted RBP21.2■□□□□ 0.98
LINC00271-201ENST00000421378 ADD2P35612 726 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 TBC1D10BQ4KMP7 808 aaPredicted RBP21.2■□□□□ 0.98
LINC00271-201ENST00000421378 RBM26Q5T8P6 1007 aaKnown RBP21.2■□□□□ 0.98
LINC00271-201ENST00000421378 ZDHHC15Q96MV8 337 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 TAF1DQ9H5J8 278 aaPredicted RBP21.2■□□□□ 0.98
LINC00271-201ENST00000421378 RRAGCQ9HB90 399 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 NMRK2Q9NPI5 230 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 DAGLAQ9Y4D2 1042 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 RFX7Q2KHR2 1363 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 ZNF532Q9HCE3 1301 aa21.2■□□□□ 0.98
LINC00271-201ENST00000421378 CYP7A1P22680 504 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 UBE3CQ15386 1083 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 ADGRA1Q86SQ6 560 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 MTMR14Q8NCE2 650 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 TRPM4Q8TD43 1214 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 FAM163AQ96GL9 167 aaPredicted RBP21.19■□□□□ 0.98
LINC00271-201ENST00000421378 GPBP1L1Q9HC44 474 aaPredicted RBP21.19■□□□□ 0.98
LINC00271-201ENST00000421378 PCDHAC2Q9Y5I4 1007 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 TCRBV5S4A2TA0A5A2 114 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 SPDYE2BA6NHP3 402 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 SPDYE6P0CI01 402 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 TICAM2Q86XR7 235 aa21.19■□□□□ 0.98
LINC00271-201ENST00000421378 WNT10BO00744 389 aa21.18■□□□□ 0.98
LINC00271-201ENST00000421378 RNF113AO15541 343 aaKnown RBP21.18■□□□□ 0.98
LINC00271-201ENST00000421378 CHGBP05060 677 aa21.18■□□□□ 0.98
LINC00271-201ENST00000421378 USP50Q70EL3 339 aaPredicted RBP21.18■□□□□ 0.98
LINC00271-201ENST00000421378 PNMA8AQ86V59 439 aaPredicted RBP21.18■□□□□ 0.98
LINC00271-201ENST00000421378 BTDP43251 543 aa21.17■□□□□ 0.98
LINC00271-201ENST00000421378 SLFNL1Q499Z3 407 aa21.17■□□□□ 0.98
LINC00271-201ENST00000421378 APOBEC3HQ6NTF7 200 aaKnown RBP21.17■□□□□ 0.98
LINC00271-201ENST00000421378 ZBED3Q96IU2 234 aaPredicted RBP21.17■□□□□ 0.98
LINC00271-201ENST00000421378 PRMT6Q96LA8 375 aaPredicted RBP21.17■□□□□ 0.98
LINC00271-201ENST00000421378 NOL10Q9BSC4 688 aaKnown RBP21.17■□□□□ 0.98
LINC00271-201ENST00000421378 GPR75-ASB3A0A0A6YYF3 556 aa21.16■□□□□ 0.98
LINC00271-201ENST00000421378 MYO1BO43795 1136 aa21.16■□□□□ 0.98
LINC00271-201ENST00000421378 NBPF9Q3BBW0 867 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms