RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ARMT1Q9H993 441 aa8.75□□□□□ -1.01
BDNF-209ENST00000420794 SIPA1L3O60292 1781 aaPredicted RBP8.75□□□□□ -1.01
BDNF-209ENST00000420794 C21orf2O43822 256 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 HLA-DOAP06340 250 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 PDCP20941 246 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 PTMSP20962 102 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 HOXA10P31260 410 aaPredicted RBP8.74□□□□□ -1.01
BDNF-209ENST00000420794 MCM5P33992 734 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 TBC1D2Q9BYX2 928 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 GOLGA6L4A6NEF3 574 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 IGSF3O75054 1194 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 CYP2E1P05181 493 aaPredicted RBP8.74□□□□□ -1.01
BDNF-209ENST00000420794 TRIM29Q14134 588 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 CRACR2BQ8N4Y2 399 aaPredicted RBP8.74□□□□□ -1.01
BDNF-209ENST00000420794 SEC62Q99442 399 aaKnown RBP8.74□□□□□ -1.01
BDNF-209ENST00000420794 CD209Q9NNX6 404 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 SALL3Q9BXA9 1300 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 RANBP6O60518 1105 aaKnown RBP8.74□□□□□ -1.01
BDNF-209ENST00000420794 TBC1D16Q8TBP0 767 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 SNX21Q969T3 373 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 TOGARAM1Q9Y4F4 1720 aa8.74□□□□□ -1.01
BDNF-209ENST00000420794 PATL2C9JE40 543 aaKnown RBP8.73□□□□□ -1.01
BDNF-209ENST00000420794 SLC27A2O14975 620 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 FGFR2P21802 821 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 PODNQ7Z5L7 613 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 PIH1D3Q9NQM4 214 aaKnown RBP8.73□□□□□ -1.01
BDNF-209ENST00000420794 MCM9Q9NXL9 1143 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 AATFQ9NY61 560 aaKnown RBP eCLIP8.73□□□□□ -1.01
BDNF-209ENST00000420794 THSD7AQ9UPZ6 1657 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 HSPD1P10809 573 aaKnown RBP8.73□□□□□ -1.01
BDNF-209ENST00000420794 EIF6P56537 245 aaKnown RBP8.73□□□□□ -1.01
BDNF-209ENST00000420794 TEX11Q8IYF3 940 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 ESR2Q92731 530 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 MAP4K1Q92918 833 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 TTF2Q9UNY4 1162 aaKnown RBP8.73□□□□□ -1.01
BDNF-209ENST00000420794 RAD21O60216 631 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 STK3Q13188 491 aa8.73□□□□□ -1.01
BDNF-209ENST00000420794 LSG1Q9H089 658 aaKnown RBP8.73□□□□□ -1.01
BDNF-209ENST00000420794 IFIT3O14879 490 aaKnown RBP8.72□□□□□ -1.01
BDNF-209ENST00000420794 PTH1RQ03431 593 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 SCARF1Q14162 830 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 CSPP1Q1MSJ5 1256 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 FBXO33Q7Z6M2 555 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 TEKT1Q969V4 418 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 SNX14Q9Y5W7 946 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 CDKL5O76039 1030 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 DBNDD1Q9H9R9 158 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 A0A0G2JLW4 131 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 TSPY2A6NKD2 308 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 TGFB2P61812 414 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 CRY2Q49AN0 593 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 RUFY3Q7L099 469 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 DHX32Q7L7V1 743 aaKnown RBP8.72□□□□□ -1.01
BDNF-209ENST00000420794 AMIGO3Q86WK7 504 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 TMTC2Q8N394 836 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 OSBP2Q969R2 916 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 GPR101Q96P66 508 aaPredicted RBP8.72□□□□□ -1.01
BDNF-209ENST00000420794 TM6SF1Q9BZW5 370 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 AFDNP55196 1824 aaKnown RBP8.72□□□□□ -1.01
BDNF-209ENST00000420794 NHSQ6T4R5 1651 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 VPS53Q5VIR6 699 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 CIZ1Q9ULV3 898 aaPredicted RBP8.72□□□□□ -1.01
BDNF-209ENST00000420794 BTAF1O14981 1849 aa8.72□□□□□ -1.01
BDNF-209ENST00000420794 CCDC196A0A1B0GTZ2 297 aa8.71□□□□□ -1.01
BDNF-209ENST00000420794 VPS37CA5D8V6 355 aaPredicted RBP8.71□□□□□ -1.01
BDNF-209ENST00000420794 XBP1P17861 261 aa8.71□□□□□ -1.01
BDNF-209ENST00000420794 CCDC178Q5BJE1 867 aa8.71□□□□□ -1.01
BDNF-209ENST00000420794 ZNF589Q86UQ0 364 aaPredicted RBP8.71□□□□□ -1.01
BDNF-209ENST00000420794 VGLL2Q8N8G2 317 aa8.71□□□□□ -1.01
BDNF-209ENST00000420794 DEKP35659 375 aaKnown RBP8.71□□□□□ -1.02
BDNF-209ENST00000420794 PICALMQ13492 652 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 TMEM67Q5HYA8 995 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 FOXD4L5Q5VV16 416 aaPredicted RBP8.71□□□□□ -1.02
BDNF-209ENST00000420794 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 NUP133Q8WUM0 1156 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 FOXD4L4Q8WXT5 416 aaPredicted RBP8.71□□□□□ -1.02
BDNF-209ENST00000420794 TAOK3Q9H2K8 898 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 DPEP1P16444 411 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 MCTP1Q6DN14 999 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 IFNL3Q8IZI9 196 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 PUS7LQ9H0K6 701 aaKnown RBP8.71□□□□□ -1.02
BDNF-209ENST00000420794 SLC12A7Q9Y666 1083 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 ARFGEF2Q9Y6D5 1785 aa8.71□□□□□ -1.02
BDNF-209ENST00000420794 USP17L3A6NCW0 530 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 USP17L4A6NCW7 530 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 FGAP02671 866 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 MECOMQ03112 1051 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 SAFBQ15424 915 aaKnown RBP eCLIP8.7□□□□□ -1.02
BDNF-209ENST00000420794 USP17L1Q7RTZ2 530 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 BRF1Q92994 677 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 ATP8A2Q9NTI2 1148 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 UBR2Q8IWV8 1755 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 ATP2B2Q01814 1243 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 TNIP1Q15025 636 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 ARHGAP27Q6ZUM4 889 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 KIAA0825Q8IV33 1275 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 CCDC83Q8IWF9 413 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 M0R2C6 588 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 PRC1O43663 620 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms