RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TEPSINQ96N21 525 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 DEFB118Q96PH6 123 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 CPA4Q9UI42 421 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 ALPK3Q96L96 1907 aa11.77□□□□□ -0.53
TRIM39-206ENST00000420746 DLG5Q8TDM6 1919 aa11.76□□□□□ -0.53
TRIM39-206ENST00000420746 INHAP05111 366 aa11.76□□□□□ -0.53
TRIM39-206ENST00000420746 PCCAP05165 728 aaPredicted RBP11.76□□□□□ -0.53
TRIM39-206ENST00000420746 PPIL2Q13356 520 aa11.76□□□□□ -0.53
TRIM39-206ENST00000420746 IRF5Q13568 498 aa11.76□□□□□ -0.53
TRIM39-206ENST00000420746 ZNF697Q5TEC3 545 aa11.76□□□□□ -0.53
TRIM39-206ENST00000420746 ANKRD23Q86SG2 305 aa11.76□□□□□ -0.53
TRIM39-206ENST00000420746 CERS5Q8N5B7 392 aa11.76□□□□□ -0.53
TRIM39-206ENST00000420746 IRF6O14896 467 aa11.75□□□□□ -0.53
TRIM39-206ENST00000420746 ADCY3O60266 1144 aa11.75□□□□□ -0.53
TRIM39-206ENST00000420746 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
TRIM39-206ENST00000420746 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
TRIM39-206ENST00000420746 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
TRIM39-206ENST00000420746 PCDHAC2Q9Y5I4 1007 aa11.75□□□□□ -0.53
TRIM39-206ENST00000420746 SNCAIPQ9Y6H5 919 aa11.75□□□□□ -0.53
TRIM39-206ENST00000420746 HOXB7P09629 217 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 SYN1P17600 705 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 TJAP1Q5JTD0 557 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 DIS3LQ8TF46 1054 aaKnown RBP11.74□□□□□ -0.53
TRIM39-206ENST00000420746 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 CD209Q9NNX6 404 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 RAPGEFL1Q9UHV5 662 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 ARIH1Q9Y4X5 557 aaPredicted RBP11.74□□□□□ -0.53
TRIM39-206ENST00000420746 SYNGAP1Q96PV0 1343 aa11.74□□□□□ -0.53
TRIM39-206ENST00000420746 BCRP11274 1271 aa11.73□□□□□ -0.53
TRIM39-206ENST00000420746 AOX1Q06278 1338 aa11.73□□□□□ -0.53
TRIM39-206ENST00000420746 PARK7Q99497 189 aaKnown RBP11.73□□□□□ -0.53
TRIM39-206ENST00000420746 CDX2Q99626 313 aaPredicted RBP11.73□□□□□ -0.53
TRIM39-206ENST00000420746 ANKRD2Q9GZV1 360 aa11.73□□□□□ -0.53
TRIM39-206ENST00000420746 HYPKQ9NX55 129 aa11.73□□□□□ -0.53
TRIM39-206ENST00000420746 GABRQQ9UN88 632 aa11.73□□□□□ -0.53
TRIM39-206ENST00000420746 PDHXO00330 501 aa11.72□□□□□ -0.53
TRIM39-206ENST00000420746 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
TRIM39-206ENST00000420746 KCNA4P22459 653 aa11.72□□□□□ -0.53
TRIM39-206ENST00000420746 TNNI2P48788 182 aa11.72□□□□□ -0.53
TRIM39-206ENST00000420746 CTSWP56202 376 aa11.72□□□□□ -0.53
TRIM39-206ENST00000420746 PPATQ06203 517 aa11.72□□□□□ -0.53
TRIM39-206ENST00000420746 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
TRIM39-206ENST00000420746 FAM161BQ96MY7 647 aa11.72□□□□□ -0.53
TRIM39-206ENST00000420746 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
TRIM39-206ENST00000420746 ZNF70Q9UC06 446 aaPredicted RBP11.72□□□□□ -0.53
TRIM39-206ENST00000420746 ELNP15502 786 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 KLRK1P26718 216 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 FLT3LGP49771 235 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 HOOK2Q96ED9 719 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.71□□□□□ -0.53
TRIM39-206ENST00000420746 PNNQ9H307 717 aaKnown RBP11.71□□□□□ -0.53
TRIM39-206ENST00000420746 C11orf49Q9H6J7 331 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 SERPINA10Q9UK55 444 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 KCNH4Q9UQ05 1017 aa11.71□□□□□ -0.53
TRIM39-206ENST00000420746 ARAP2Q8WZ64 1704 aa11.71□□□□□ -0.54
TRIM39-206ENST00000420746 TMEM265A0A087WTH1 108 aa11.7□□□□□ -0.54
TRIM39-206ENST00000420746 F8W031 263 aaPredicted RBP11.7□□□□□ -0.54
TRIM39-206ENST00000420746 IL1R1P14778 569 aa11.7□□□□□ -0.54
TRIM39-206ENST00000420746 PPP2R1AP30153 589 aa11.7□□□□□ -0.54
TRIM39-206ENST00000420746 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRIM39-206ENST00000420746 MAP3K12Q12852 859 aa11.7□□□□□ -0.54
TRIM39-206ENST00000420746 TTLL11Q8NHH1 800 aa11.7□□□□□ -0.54
TRIM39-206ENST00000420746 WRNIP1Q96S55 665 aa11.7□□□□□ -0.54
TRIM39-206ENST00000420746 TMEM39BQ9GZU3 492 aa11.7□□□□□ -0.54
TRIM39-206ENST00000420746 CWC25Q9NXE8 425 aaPredicted RBP11.7□□□□□ -0.54
TRIM39-206ENST00000420746 CLSPNQ9HAW4 1339 aa11.69□□□□□ -0.54
TRIM39-206ENST00000420746 MAPK8IP3Q9UPT6 1336 aa11.69□□□□□ -0.54
TRIM39-206ENST00000420746 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
TRIM39-206ENST00000420746 GOLGA2Q08379 1002 aa11.69□□□□□ -0.54
TRIM39-206ENST00000420746 RIC3Q7Z5B4 369 aa11.69□□□□□ -0.54
TRIM39-206ENST00000420746 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.69□□□□□ -0.54
TRIM39-206ENST00000420746 SEMA6BQ9H3T3 888 aa11.69□□□□□ -0.54
TRIM39-206ENST00000420746 GREM2Q9H772 168 aa11.69□□□□□ -0.54
TRIM39-206ENST00000420746 CDH23Q9H251 3354 aa11.68□□□□□ -0.54
TRIM39-206ENST00000420746 KCNJ4P48050 445 aa11.68□□□□□ -0.54
TRIM39-206ENST00000420746 LMOD3Q0VAK6 560 aa11.68□□□□□ -0.54
TRIM39-206ENST00000420746 MOGSQ13724 837 aa11.68□□□□□ -0.54
TRIM39-206ENST00000420746 ZKSCAN4Q969J2 545 aaPredicted RBP11.68□□□□□ -0.54
TRIM39-206ENST00000420746 TDRD3Q9H7E2 651 aaKnown RBP11.68□□□□□ -0.54
TRIM39-206ENST00000420746 OGDHLQ9ULD0 1010 aa11.68□□□□□ -0.54
TRIM39-206ENST00000420746 PFASO15067 1338 aa11.67□□□□□ -0.54
TRIM39-206ENST00000420746 TCP10L2B9ZVM9 353 aa11.67□□□□□ -0.54
TRIM39-206ENST00000420746 TNPO2O14787 897 aaKnown RBP11.67□□□□□ -0.54
TRIM39-206ENST00000420746 HMGCRP04035 888 aa11.67□□□□□ -0.54
TRIM39-206ENST00000420746 FOSL2P15408 326 aa11.67□□□□□ -0.54
TRIM39-206ENST00000420746 CNGB1Q14028 1251 aaPredicted RBP11.67□□□□□ -0.54
TRIM39-206ENST00000420746 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
TRIM39-206ENST00000420746 DZIP1LQ8IYY4 767 aaKnown RBP11.67□□□□□ -0.54
TRIM39-206ENST00000420746 MYD88Q99836 296 aa11.67□□□□□ -0.54
TRIM39-206ENST00000420746 MGAMO43451 1857 aa11.67□□□□□ -0.54
TRIM39-206ENST00000420746 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
TRIM39-206ENST00000420746 DDX60LQ5H9U9 1706 aaKnown RBP11.66□□□□□ -0.54
TRIM39-206ENST00000420746 CHL1O00533 1208 aa11.66□□□□□ -0.54
TRIM39-206ENST00000420746 MDM2Q00987 491 aaPredicted RBP11.66□□□□□ -0.54
TRIM39-206ENST00000420746 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
TRIM39-206ENST00000420746 DCAF15Q66K64 600 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms