RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 A0A1B0GUL7 405 aa26.42■■□□□ 1.82
CPNE1-211ENST00000420363 SEMA3EO15041 775 aa26.42■■□□□ 1.82
CPNE1-211ENST00000420363 ZBTB40Q9NUA8 1239 aa26.42■■□□□ 1.82
CPNE1-211ENST00000420363 NOP58Q9Y2X3 529 aaKnown RBP26.42■■□□□ 1.82
CPNE1-211ENST00000420363 CHAF1AQ13111 956 aaPredicted RBP26.41■■□□□ 1.82
CPNE1-211ENST00000420363 DLGAP5Q15398 846 aa26.41■■□□□ 1.82
CPNE1-211ENST00000420363 SERPINA10Q9UK55 444 aa26.41■■□□□ 1.82
CPNE1-211ENST00000420363 PDS5AQ29RF7 1337 aaKnown RBP26.4■■□□□ 1.82
CPNE1-211ENST00000420363 F8W031 263 aaPredicted RBP26.4■■□□□ 1.82
CPNE1-211ENST00000420363 FKBP1BP68106 108 aa26.4■■□□□ 1.82
CPNE1-211ENST00000420363 DGKZQ13574 1117 aa26.4■■□□□ 1.82
CPNE1-211ENST00000420363 APOBEC3FQ8IUX4 373 aaKnown RBP26.4■■□□□ 1.82
CPNE1-211ENST00000420363 WDR66Q8TBY9 1149 aa26.4■■□□□ 1.82
CPNE1-211ENST00000420363 GPR108Q9NPR9 543 aa26.4■■□□□ 1.82
CPNE1-211ENST00000420363 SAGE1Q9NXZ1 904 aa26.4■■□□□ 1.82
CPNE1-211ENST00000420363 TTF2Q9UNY4 1162 aaKnown RBP26.4■■□□□ 1.82
CPNE1-211ENST00000420363 CASP8AP2Q9UKL3 1982 aa26.4■■□□□ 1.82
CPNE1-211ENST00000420363 SPDYE2BA6NHP3 402 aa26.39■■□□□ 1.82
CPNE1-211ENST00000420363 SLC10A3P09131 477 aa26.39■■□□□ 1.82
CPNE1-211ENST00000420363 SPDYE6P0CI01 402 aa26.39■■□□□ 1.82
CPNE1-211ENST00000420363 HDLBPQ00341 1268 aaKnown RBP26.39■■□□□ 1.82
CPNE1-211ENST00000420363 CFAP100Q494V2 611 aa26.39■■□□□ 1.82
CPNE1-211ENST00000420363 MAST3O60307 1309 aa26.39■■□□□ 1.81
CPNE1-211ENST00000420363 TRPA1O75762 1119 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 ADORA1P30542 326 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 PHKA1P46020 1223 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 C20orf194Q5TEA3 1177 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 CCDC102BQ68D86 513 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 RPAP2Q8IXW5 612 aaPredicted RBP26.38■■□□□ 1.81
CPNE1-211ENST00000420363 XAGE2Q96GT9 111 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 DENND2AQ9ULE3 1009 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 SALL1Q9NSC2 1324 aa26.38■■□□□ 1.81
CPNE1-211ENST00000420363 SURF6O75683 361 aaKnown RBP26.37■■□□□ 1.81
CPNE1-211ENST00000420363 CSRNP1Q96S65 589 aa26.37■■□□□ 1.81
CPNE1-211ENST00000420363 RNF186Q9NXI6 227 aa26.37■■□□□ 1.81
CPNE1-211ENST00000420363 SCAF8Q9UPN6 1271 aaKnown RBP26.37■■□□□ 1.81
CPNE1-211ENST00000420363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.37■■□□□ 1.81
CPNE1-211ENST00000420363 PAPPA2Q9BXP8 1791 aa26.37■■□□□ 1.81
CPNE1-211ENST00000420363 MYO1BO43795 1136 aa26.36■■□□□ 1.81
CPNE1-211ENST00000420363 TIMM10P62072 90 aa26.36■■□□□ 1.81
CPNE1-211ENST00000420363 OS9Q13438 667 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-211ENST00000420363 REM2Q8IYK8 340 aaPredicted RBP26.36■■□□□ 1.81
CPNE1-211ENST00000420363 MRIQ9BWK5 157 aa26.35■■□□□ 1.81
CPNE1-211ENST00000420363 HMMRO75330 724 aa26.34■■□□□ 1.81
CPNE1-211ENST00000420363 CRKP46108 304 aa26.34■■□□□ 1.81
CPNE1-211ENST00000420363 MLLT1Q03111 559 aaPredicted RBP26.34■■□□□ 1.81
CPNE1-211ENST00000420363 RBM5P52756 815 aaKnown RBP eCLIP26.33■■□□□ 1.813e-6■■■□□ 15.4
CPNE1-211ENST00000420363 TTLL12Q14166 644 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-211ENST00000420363 GRIK5Q16478 980 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 HSP90AB4PQ58FF6 505 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 TNNI3KQ59H18 835 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 PRAMEF18Q5VWM3 479 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 RASAL3Q86YV0 1011 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 ERC1Q8IUD2 1116 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 ZGPATQ8N5A5 531 aaKnown RBP26.33■■□□□ 1.81
CPNE1-211ENST00000420363 PRMT6Q96LA8 375 aaPredicted RBP26.33■■□□□ 1.81
CPNE1-211ENST00000420363 PCDHAC2Q9Y5I4 1007 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 PPP2R3BQ9Y5P8 575 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 FPGT-TNNI3KV9GXZ4 949 aa26.33■■□□□ 1.81
CPNE1-211ENST00000420363 RGS19P49795 217 aa26.32■■□□□ 1.8
CPNE1-211ENST00000420363 RRP1P56182 461 aaKnown RBP26.32■■□□□ 1.8
CPNE1-211ENST00000420363 RASGRF1Q13972 1273 aa26.32■■□□□ 1.8
CPNE1-211ENST00000420363 MOB2Q70IA6 237 aa26.32■■□□□ 1.8
CPNE1-211ENST00000420363 TEKT1Q969V4 418 aa26.32■■□□□ 1.8
CPNE1-211ENST00000420363 NEUROD6Q96NK8 337 aa26.32■■□□□ 1.8
CPNE1-211ENST00000420363 UBE2Q2LH0YL09 131 aa26.31■■□□□ 1.8
CPNE1-211ENST00000420363 ARID4AP29374 1257 aaPredicted RBP26.31■■□□□ 1.8
CPNE1-211ENST00000420363 NF2P35240 595 aa26.31■■□□□ 1.8
CPNE1-211ENST00000420363 SPDYE2Q495Y8 402 aa26.31■■□□□ 1.8
CPNE1-211ENST00000420363 HHIPL2Q6UWX4 724 aa26.3■■□□□ 1.8
CPNE1-211ENST00000420363 ZDHHC15Q96MV8 337 aa26.3■■□□□ 1.8
CPNE1-211ENST00000420363 TNFAIP1Q13829 316 aa26.29■■□□□ 1.8
CPNE1-211ENST00000420363 GORABQ5T7V8 394 aa26.29■■□□□ 1.8
CPNE1-211ENST00000420363 PRDX5P30044 214 aa26.28■■□□□ 1.8
CPNE1-211ENST00000420363 SIRT2Q8IXJ6 389 aa26.28■■□□□ 1.8
CPNE1-211ENST00000420363 EXOC6BQ9Y2D4 811 aa26.28■■□□□ 1.8
CPNE1-211ENST00000420363 AOX1Q06278 1338 aa26.28■■□□□ 1.8
CPNE1-211ENST00000420363 CLRN2A0PK11 232 aa26.27■■□□□ 1.8
CPNE1-211ENST00000420363 LDHBP07195 334 aaKnown RBP26.27■■□□□ 1.8
CPNE1-211ENST00000420363 UQCRFS1P1P0C7P4 283 aa26.27■■□□□ 1.8
CPNE1-211ENST00000420363 DEFB129Q9H1M3 183 aa26.27■■□□□ 1.8
CPNE1-211ENST00000420363 ZNF512BQ96KM6 892 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-211ENST00000420363 VEZTQ9HBM0 779 aa26.26■■□□□ 1.79
CPNE1-211ENST00000420363 ZNF70Q9UC06 446 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-211ENST00000420363 AKAP11Q9UKA4 1901 aa26.26■■□□□ 1.79
CPNE1-211ENST00000420363 MAST2Q6P0Q8 1798 aa26.25■■□□□ 1.79
CPNE1-211ENST00000420363 DBNDD2Q9BQY9 259 aa26.25■■□□□ 1.79
CPNE1-211ENST00000420363 MYH2Q9UKX2 1941 aa26.24■■□□□ 1.79
CPNE1-211ENST00000420363 CCDC158Q5M9N0 1113 aa26.24■■□□□ 1.79
CPNE1-211ENST00000420363 SPTY2D1Q68D10 685 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-211ENST00000420363 APOBEC3HQ6NTF7 200 aaKnown RBP26.24■■□□□ 1.79
CPNE1-211ENST00000420363 ARMC9Q7Z3E5 817 aa26.24■■□□□ 1.79
CPNE1-211ENST00000420363 SPATA5Q8NB90 893 aa26.24■■□□□ 1.79
CPNE1-211ENST00000420363 KIF1BPQ96EK5 621 aa26.24■■□□□ 1.79
CPNE1-211ENST00000420363 TDRD3Q9H7E2 651 aaKnown RBP26.24■■□□□ 1.79
CPNE1-211ENST00000420363 HMG20BQ9P0W2 317 aa26.24■■□□□ 1.79
CPNE1-211ENST00000420363 SSC5DA1L4H1 1573 aa26.24■■□□□ 1.79
CPNE1-211ENST00000420363 MCAMP43121 646 aa26.23■■□□□ 1.79
CPNE1-211ENST00000420363 RHPN1Q8TCX5 695 aa26.23■■□□□ 1.79
CPNE1-211ENST00000420363 EAF2Q96CJ1 260 aaPredicted RBP26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms