RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 PNMA6EA0A0J9YXQ4 647 aa19.71■□□□□ 0.75
NOD1-204ENST00000419601 SLC10A3P09131 477 aa19.71■□□□□ 0.75
NOD1-204ENST00000419601 AOX1Q06278 1338 aa19.71■□□□□ 0.75
NOD1-204ENST00000419601 SEMA3EO15041 775 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 CA12O43570 354 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 HSPA8P11142 646 aaKnown RBP19.7■□□□□ 0.74
NOD1-204ENST00000419601 TFCP2Q12800 502 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 TNFAIP1Q13829 316 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 SPDYE2Q495Y8 402 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 MOB2Q70IA6 237 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 TEKT1Q969V4 418 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 MRIQ9BWK5 157 aa19.7■□□□□ 0.74
NOD1-204ENST00000419601 ZNF70Q9UC06 446 aaPredicted RBP19.7■□□□□ 0.74
NOD1-204ENST00000419601 UBE2Q2LH0YL09 131 aa19.69■□□□□ 0.74
NOD1-204ENST00000419601 ZBTB7BO15156 539 aaPredicted RBP19.69■□□□□ 0.74
NOD1-204ENST00000419601 MS4A1P11836 297 aa19.69■□□□□ 0.74
NOD1-204ENST00000419601 ARMC9Q7Z3E5 817 aa19.69■□□□□ 0.74
NOD1-204ENST00000419601 ZIC5Q96T25 663 aa19.69■□□□□ 0.74
NOD1-204ENST00000419601 TDRD3Q9H7E2 651 aaKnown RBP19.69■□□□□ 0.74
NOD1-204ENST00000419601 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 ZBTB22O15209 634 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 ADORA1P30542 326 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 PHKA1P46020 1223 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 TIMM10P62072 90 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 G3BP1Q13283 466 aaKnown RBP eCLIP19.68■□□□□ 0.74
NOD1-204ENST00000419601 POLA2Q14181 598 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 SUPT20HL1Q3ZLR7 823 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 CCDC102BQ68D86 513 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 RASAL3Q86YV0 1011 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 DENND2AQ9ULE3 1009 aa19.68■□□□□ 0.74
NOD1-204ENST00000419601 ATP8B2P98198 1209 aa19.67■□□□□ 0.74
NOD1-204ENST00000419601 KIF23Q02241 960 aaPredicted RBP19.67■□□□□ 0.74
NOD1-204ENST00000419601 RASA3Q14644 834 aa19.67■□□□□ 0.74
NOD1-204ENST00000419601 SSH3Q8TE77 659 aa19.67■□□□□ 0.74
NOD1-204ENST00000419601 ABHD8Q96I13 439 aa19.67■□□□□ 0.74
NOD1-204ENST00000419601 ZDHHC15Q96MV8 337 aa19.67■□□□□ 0.74
NOD1-204ENST00000419601 PRKG1Q13976 671 aa19.66■□□□□ 0.74
NOD1-204ENST00000419601 MVPQ14764 893 aaKnown RBP19.66■□□□□ 0.74
NOD1-204ENST00000419601 HHIPL2Q6UWX4 724 aa19.66■□□□□ 0.74
NOD1-204ENST00000419601 PANK1Q8TE04 598 aa19.66■□□□□ 0.74
NOD1-204ENST00000419601 C1orf115Q9H7X2 142 aa19.66■□□□□ 0.74
NOD1-204ENST00000419601 ANGEL1Q9UNK9 670 aaKnown RBP19.66■□□□□ 0.74
NOD1-204ENST00000419601 SALL1Q9NSC2 1324 aa19.66■□□□□ 0.74
NOD1-204ENST00000419601 PPP1R12BO60237 982 aaPredicted RBP19.65■□□□□ 0.74
NOD1-204ENST00000419601 TNNI2P48788 182 aa19.65■□□□□ 0.74
NOD1-204ENST00000419601 LDLRAD1Q5T700 205 aa19.65■□□□□ 0.74
NOD1-204ENST00000419601 REM2Q8IYK8 340 aaPredicted RBP19.65■□□□□ 0.74
NOD1-204ENST00000419601 XAGE2Q96GT9 111 aa19.65■□□□□ 0.74
NOD1-204ENST00000419601 NEUROD6Q96NK8 337 aa19.65■□□□□ 0.74
NOD1-204ENST00000419601 RCAN3Q9UKA8 241 aa19.65■□□□□ 0.74
NOD1-204ENST00000419601 SSC5DA1L4H1 1573 aa19.65■□□□□ 0.74
NOD1-204ENST00000419601 TCP10L2B9ZVM9 353 aa19.64■□□□□ 0.73
NOD1-204ENST00000419601 LDHBP07195 334 aaKnown RBP19.64■□□□□ 0.73
NOD1-204ENST00000419601 MAP3K11Q16584 847 aa19.64■□□□□ 0.73
NOD1-204ENST00000419601 NBPF12Q5TAG4 269 aaPredicted RBP19.64■□□□□ 0.73
NOD1-204ENST00000419601 ZGPATQ8N5A5 531 aaKnown RBP19.64■□□□□ 0.73
NOD1-204ENST00000419601 TMOD2Q9NZR1 351 aa19.64■□□□□ 0.73
NOD1-204ENST00000419601 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.64■□□□□ 0.73
NOD1-204ENST00000419601 PDS5AQ29RF7 1337 aaKnown RBP19.64■□□□□ 0.73
NOD1-204ENST00000419601 PRDX5P30044 214 aa19.63■□□□□ 0.73
NOD1-204ENST00000419601 OS9Q13438 667 aaPredicted RBP19.63■□□□□ 0.73
NOD1-204ENST00000419601 RASGRF1Q13972 1273 aa19.63■□□□□ 0.73
NOD1-204ENST00000419601 GORABQ5T7V8 394 aa19.63■□□□□ 0.73
NOD1-204ENST00000419601 APOBEC3HQ6NTF7 200 aaKnown RBP19.63■□□□□ 0.73
NOD1-204ENST00000419601 UNCXA6NJT0 531 aa19.62■□□□□ 0.73
NOD1-204ENST00000419601 SURF6O75683 361 aaKnown RBP19.62■□□□□ 0.73
NOD1-204ENST00000419601 FKBP1CQ5VVH2 108 aa19.62■□□□□ 0.73
NOD1-204ENST00000419601 CSRNP1Q96S65 589 aa19.62■□□□□ 0.73
NOD1-204ENST00000419601 SAGE1Q9NXZ1 904 aa19.62■□□□□ 0.73
NOD1-204ENST00000419601 TSKSQ9UJT2 592 aa19.62■□□□□ 0.73
NOD1-204ENST00000419601 FZD1Q9UP38 647 aa19.62■□□□□ 0.73
NOD1-204ENST00000419601 IREB2P48200 963 aaKnown RBP19.61■□□□□ 0.73
NOD1-204ENST00000419601 TEPSINQ96N21 525 aa19.61■□□□□ 0.73
NOD1-204ENST00000419601 TMEM39BQ9GZU3 492 aa19.61■□□□□ 0.73
NOD1-204ENST00000419601 GPR108Q9NPR9 543 aa19.61■□□□□ 0.73
NOD1-204ENST00000419601 DAGLAQ9Y4D2 1042 aa19.61■□□□□ 0.73
NOD1-204ENST00000419601 AKAP11Q9UKA4 1901 aa19.61■□□□□ 0.73
NOD1-204ENST00000419601 SLC34A2O95436 690 aa19.6■□□□□ 0.73
NOD1-204ENST00000419601 CACNB3P54284 484 aa19.6■□□□□ 0.73
NOD1-204ENST00000419601 DIXDC1Q155Q3 683 aa19.6■□□□□ 0.73
NOD1-204ENST00000419601 CEP85Q6P2H3 762 aa19.6■□□□□ 0.73
NOD1-204ENST00000419601 FAM83AQ86UY5 434 aa19.6■□□□□ 0.73
NOD1-204ENST00000419601 SLC10A4Q96EP9 437 aa19.6■□□□□ 0.73
NOD1-204ENST00000419601 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
NOD1-204ENST00000419601 USP2O75604 605 aaPredicted RBP19.59■□□□□ 0.73
NOD1-204ENST00000419601 SPTY2D1Q68D10 685 aaPredicted RBP19.59■□□□□ 0.73
NOD1-204ENST00000419601 RNF186Q9NXI6 227 aa19.59■□□□□ 0.73
NOD1-204ENST00000419601 DDX19BQ9UMR2 479 aa19.59■□□□□ 0.73
NOD1-204ENST00000419601 ARID4AP29374 1257 aaPredicted RBP19.58■□□□□ 0.72
NOD1-204ENST00000419601 TNNI3KQ59H18 835 aa19.58■□□□□ 0.72
NOD1-204ENST00000419601 SPRYD7Q5W111 196 aa19.58■□□□□ 0.72
NOD1-204ENST00000419601 DZIP1Q86YF9 867 aaKnown RBP19.58■□□□□ 0.72
NOD1-204ENST00000419601 ANKRD13AQ8IZ07 590 aa19.58■□□□□ 0.72
NOD1-204ENST00000419601 ABCF2Q9UG63 623 aa19.58■□□□□ 0.72
NOD1-204ENST00000419601 COG6Q9Y2V7 657 aa19.58■□□□□ 0.72
NOD1-204ENST00000419601 FPGT-TNNI3KV9GXZ4 949 aa19.58■□□□□ 0.72
NOD1-204ENST00000419601 TRPA1O75762 1119 aa19.57■□□□□ 0.72
NOD1-204ENST00000419601 UQCRFS1P1P0C7P4 283 aa19.57■□□□□ 0.72
NOD1-204ENST00000419601 CDAN1Q8IWY9 1227 aa19.57■□□□□ 0.72
NOD1-204ENST00000419601 SLF2Q8IX21 1173 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms