RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SIRT2Q8IXJ6 389 aa25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 C2orf69Q8N8R5 385 aa25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 WDR66Q8TBY9 1149 aa25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 ZIC5Q96T25 663 aa25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 DEFB129Q9H1M3 183 aa25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 AKAP2Q9Y2D5 859 aa25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 PDS5AQ29RF7 1337 aaKnown RBP25.53■■□□□ 1.68
PKNOX1-202ENST00000418336 PRDX5P30044 214 aa25.52■■□□□ 1.68
PKNOX1-202ENST00000418336 ECE1P42892 770 aa25.52■■□□□ 1.68
PKNOX1-202ENST00000418336 FKBP1BP68106 108 aa25.52■■□□□ 1.68
PKNOX1-202ENST00000418336 G3BP1Q13283 466 aaKnown RBP eCLIP25.52■■□□□ 1.68
PKNOX1-202ENST00000418336 APOBEC3HQ6NTF7 200 aaKnown RBP25.52■■□□□ 1.68
PKNOX1-202ENST00000418336 GPR108Q9NPR9 543 aa25.52■■□□□ 1.68
PKNOX1-202ENST00000418336 ZNF70Q9UC06 446 aaPredicted RBP25.52■■□□□ 1.68
PKNOX1-202ENST00000418336 PDE3AQ14432 1141 aa25.51■■□□□ 1.67
PKNOX1-202ENST00000418336 RGMBQ6NW40 437 aa25.51■■□□□ 1.67
PKNOX1-202ENST00000418336 ZDHHC15Q96MV8 337 aa25.51■■□□□ 1.67
PKNOX1-202ENST00000418336 TDRD3Q9H7E2 651 aaKnown RBP25.51■■□□□ 1.67
PKNOX1-202ENST00000418336 DENND2AQ9ULE3 1009 aa25.51■■□□□ 1.67
PKNOX1-202ENST00000418336 DDX19BQ9UMR2 479 aa25.51■■□□□ 1.67
PKNOX1-202ENST00000418336 FOXN1O15353 648 aa25.5■■□□□ 1.67
PKNOX1-202ENST00000418336 MAP2K2P36507 400 aa25.5■■□□□ 1.67
PKNOX1-202ENST00000418336 PPP2R3BQ9Y5P8 575 aa25.5■■□□□ 1.67
PKNOX1-202ENST00000418336 SURF6O75683 361 aaKnown RBP25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 ARID4AP29374 1257 aaPredicted RBP25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 RBM5P52756 815 aaKnown RBP eCLIP25.49■■□□□ 1.674e-6■■□□□ 12.5
PKNOX1-202ENST00000418336 TNNI3KQ59H18 835 aa25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 HHIPL2Q6UWX4 724 aa25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 CDAN1Q8IWY9 1227 aa25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 TEPSINQ96N21 525 aa25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 GNL3LQ9NVN8 582 aaKnown RBP25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 FPGT-TNNI3KV9GXZ4 949 aa25.49■■□□□ 1.67
PKNOX1-202ENST00000418336 AKAP11Q9UKA4 1901 aa25.48■■□□□ 1.67
PKNOX1-202ENST00000418336 SLC10A3P09131 477 aa25.48■■□□□ 1.67
PKNOX1-202ENST00000418336 PAXIP1Q6ZW49 1069 aaPredicted RBP25.48■■□□□ 1.67
PKNOX1-202ENST00000418336 ZNF384Q8TF68 577 aa25.48■■□□□ 1.67
PKNOX1-202ENST00000418336 TEKT1Q969V4 418 aa25.48■■□□□ 1.67
PKNOX1-202ENST00000418336 MAST3O60307 1309 aa25.47■■□□□ 1.67
PKNOX1-202ENST00000418336 MYO1BO43795 1136 aa25.47■■□□□ 1.67
PKNOX1-202ENST00000418336 MAP3K11Q16584 847 aa25.47■■□□□ 1.67
PKNOX1-202ENST00000418336 PI16Q6UXB8 463 aa25.47■■□□□ 1.67
PKNOX1-202ENST00000418336 HMG20BQ9P0W2 317 aa25.47■■□□□ 1.67
PKNOX1-202ENST00000418336 FZD1Q9UP38 647 aa25.47■■□□□ 1.67
PKNOX1-202ENST00000418336 UBE2Q2LH0YL09 131 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 GRM1Q13255 1194 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 RASA3Q14644 834 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 DIXDC1Q155Q3 683 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 LDLRAD1Q5T700 205 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 RASAL3Q86YV0 1011 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 NEUROD6Q96NK8 337 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 VEZTQ9HBM0 779 aa25.46■■□□□ 1.67
PKNOX1-202ENST00000418336 NBPF12Q5TAG4 269 aaPredicted RBP25.45■■□□□ 1.66
PKNOX1-202ENST00000418336 IFFO2Q5TF58 517 aa25.45■■□□□ 1.66
PKNOX1-202ENST00000418336 DBNDD2Q9BQY9 259 aa25.45■■□□□ 1.66
PKNOX1-202ENST00000418336 DAGLAQ9Y4D2 1042 aa25.45■■□□□ 1.66
PKNOX1-202ENST00000418336 MCAMP43121 646 aa25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 ZNF157P51786 506 aaPredicted RBP25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 CACNB3P54284 484 aa25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 MAP2K1Q02750 393 aaPredicted RBP25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 RPAP2Q8IXW5 612 aaPredicted RBP25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 EAF2Q96CJ1 260 aaPredicted RBP25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 TLR7Q9NYK1 1049 aaKnown RBP25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 EXOC6BQ9Y2D4 811 aa25.44■■□□□ 1.66
PKNOX1-202ENST00000418336 NOGQ13253 232 aa25.43■■□□□ 1.66
PKNOX1-202ENST00000418336 COL13A1Q5TAT6 717 aaPredicted RBP25.43■■□□□ 1.66
PKNOX1-202ENST00000418336 DBNLQ9UJU6 430 aaKnown RBP25.43■■□□□ 1.66
PKNOX1-202ENST00000418336 GAKO14976 1311 aa25.42■■□□□ 1.66
PKNOX1-202ENST00000418336 OTOFQ9HC10 1997 aa25.42■■□□□ 1.66
PKNOX1-202ENST00000418336 LDHBP07195 334 aaKnown RBP25.42■■□□□ 1.66
PKNOX1-202ENST00000418336 CCDC102AQ96A19 550 aa25.42■■□□□ 1.66
PKNOX1-202ENST00000418336 TMEM39BQ9GZU3 492 aa25.42■■□□□ 1.66
PKNOX1-202ENST00000418336 RFX7Q2KHR2 1363 aa25.42■■□□□ 1.66
PKNOX1-202ENST00000418336 MYH2Q9UKX2 1941 aa25.41■■□□□ 1.66
PKNOX1-202ENST00000418336 TCP10L2B9ZVM9 353 aa25.41■■□□□ 1.66
PKNOX1-202ENST00000418336 FKBP1CQ5VVH2 108 aa25.41■■□□□ 1.66
PKNOX1-202ENST00000418336 SPATA5Q8NB90 893 aa25.41■■□□□ 1.66
PKNOX1-202ENST00000418336 ZNF512BQ96KM6 892 aaPredicted RBP25.41■■□□□ 1.66
PKNOX1-202ENST00000418336 LAMB1P07942 1786 aa25.41■■□□□ 1.66
PKNOX1-202ENST00000418336 HSPA8P11142 646 aaKnown RBP25.4■■□□□ 1.66
PKNOX1-202ENST00000418336 NF2P35240 595 aa25.4■■□□□ 1.66
PKNOX1-202ENST00000418336 PRKG1Q13976 671 aa25.4■■□□□ 1.66
PKNOX1-202ENST00000418336 CDC42EP5Q6NZY7 148 aa25.4■■□□□ 1.66
PKNOX1-202ENST00000418336 FAM163AQ96GL9 167 aaPredicted RBP25.4■■□□□ 1.66
PKNOX1-202ENST00000418336 USP2O75604 605 aaPredicted RBP25.39■■□□□ 1.66
PKNOX1-202ENST00000418336 KIF23Q02241 960 aaPredicted RBP25.39■■□□□ 1.66
PKNOX1-202ENST00000418336 OS9Q13438 667 aaPredicted RBP25.39■■□□□ 1.66
PKNOX1-202ENST00000418336 TNFAIP1Q13829 316 aa25.39■■□□□ 1.66
PKNOX1-202ENST00000418336 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.39■■□□□ 1.66
PKNOX1-202ENST00000418336 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.66
PKNOX1-202ENST00000418336 TBC1D9Q6ZT07 1266 aa25.38■■□□□ 1.65
PKNOX1-202ENST00000418336 FAM83AQ86UY5 434 aa25.38■■□□□ 1.65
PKNOX1-202ENST00000418336 ZGPATQ8N5A5 531 aaKnown RBP25.38■■□□□ 1.65
PKNOX1-202ENST00000418336 ANGEL1Q9UNK9 670 aaKnown RBP25.38■■□□□ 1.65
PKNOX1-202ENST00000418336 RPAP1Q9BWH6 1393 aaPredicted RBP25.38■■□□□ 1.65
PKNOX1-202ENST00000418336 UQCRFS1P1P0C7P4 283 aa25.37■■□□□ 1.65
PKNOX1-202ENST00000418336 NFIAQ12857 509 aa25.37■■□□□ 1.65
PKNOX1-202ENST00000418336 SUPT20HL1Q3ZLR7 823 aa25.37■■□□□ 1.65
PKNOX1-202ENST00000418336 ARMC9Q7Z3E5 817 aa25.37■■□□□ 1.65
PKNOX1-202ENST00000418336 RHPN1Q8TCX5 695 aa25.37■■□□□ 1.65
PKNOX1-202ENST00000418336 CCDC8Q9H0W5 538 aaPredicted RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms